RNA–Protein interactions for RNA: ENST00000482519.1

VAMP4-204, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 3

Gene VAMP4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-204ENST00000482519 PDCP20941 246 aa18.38■□□□□ 0.53
VAMP4-204ENST00000482519 GLRA2P23416 452 aa18.38■□□□□ 0.53
VAMP4-204ENST00000482519 PRPHP41219 470 aa18.38■□□□□ 0.53
VAMP4-204ENST00000482519 PTENP60484 403 aa18.38■□□□□ 0.53
VAMP4-204ENST00000482519 NCBP1Q09161 790 aaKnown RBP18.38■□□□□ 0.53
VAMP4-204ENST00000482519 TJAP1Q5JTD0 557 aa18.38■□□□□ 0.53
VAMP4-204ENST00000482519 CLLU1OSQ5K130 101 aa18.38■□□□□ 0.53
VAMP4-204ENST00000482519 EP400NLQ6ZTU2 488 aa18.38■□□□□ 0.53
VAMP4-204ENST00000482519 ZNF598Q86UK7 904 aaKnown RBP18.38■□□□□ 0.53
VAMP4-204ENST00000482519 THNSL1Q8IYQ7 743 aa18.38■□□□□ 0.53
VAMP4-204ENST00000482519 MCPH1Q8NEM0 835 aa18.38■□□□□ 0.53
VAMP4-204ENST00000482519 COL25A1Q9BXS0 654 aaPredicted RBP18.38■□□□□ 0.53
VAMP4-204ENST00000482519 BHMT2Q9H2M3 363 aa18.38■□□□□ 0.53
VAMP4-204ENST00000482519 FAM105AQ9NUU6 356 aa18.38■□□□□ 0.53
VAMP4-204ENST00000482519 COG5Q9UP83 839 aa18.38■□□□□ 0.53
VAMP4-204ENST00000482519 STK24Q9Y6E0 443 aa18.38■□□□□ 0.53
VAMP4-204ENST00000482519 MYO7AQ13402 2215 aa18.37■□□□□ 0.53
VAMP4-204ENST00000482519 VWA3AA6NCI4 1184 aa18.37■□□□□ 0.53
VAMP4-204ENST00000482519 LRRIQ4A6NIV6 560 aa18.37■□□□□ 0.53
VAMP4-204ENST00000482519 K7ELQ4 463 aaPredicted RBP18.37■□□□□ 0.53
VAMP4-204ENST00000482519 ATF7P17544 494 aaPredicted RBP18.37■□□□□ 0.53
VAMP4-204ENST00000482519 MUTP22033 750 aa18.37■□□□□ 0.53
VAMP4-204ENST00000482519 ATP2C1P98194 919 aaPredicted RBP18.37■□□□□ 0.53
VAMP4-204ENST00000482519 AAK1Q2M2I8 961 aa18.37■□□□□ 0.53
VAMP4-204ENST00000482519 TCEAL5Q5H9L2 206 aa18.37■□□□□ 0.53
VAMP4-204ENST00000482519 LRRC55Q6ZSA7 311 aa18.37■□□□□ 0.53
VAMP4-204ENST00000482519 LRRC43Q8N309 656 aa18.37■□□□□ 0.53
VAMP4-204ENST00000482519 COLGALT1Q8NBJ5 622 aa18.37■□□□□ 0.53
VAMP4-204ENST00000482519 P2RX5Q93086 422 aa18.37■□□□□ 0.53
VAMP4-204ENST00000482519 CPB2Q96IY4 423 aa18.37■□□□□ 0.53
VAMP4-204ENST00000482519 LMAN2LQ9H0V9 348 aa18.37■□□□□ 0.53
VAMP4-204ENST00000482519 NSUN3Q9H649 340 aaKnown RBP18.37■□□□□ 0.53
VAMP4-204ENST00000482519 CWH43Q9H720 699 aa18.37■□□□□ 0.53
VAMP4-204ENST00000482519 POLD4Q9HCU8 107 aa18.37■□□□□ 0.53
VAMP4-204ENST00000482519 INPP5FQ9Y2H2 1132 aa18.37■□□□□ 0.53
VAMP4-204ENST00000482519 PCDHB2Q9Y5E7 798 aa18.37■□□□□ 0.53
VAMP4-204ENST00000482519 E9PMD0 336 aa18.36■□□□□ 0.53
VAMP4-204ENST00000482519 TSPAN1O60635 241 aa18.36■□□□□ 0.53
VAMP4-204ENST00000482519 LAG3P18627 525 aa18.36■□□□□ 0.53
VAMP4-204ENST00000482519 CYP11B2P19099 503 aa18.36■□□□□ 0.53
VAMP4-204ENST00000482519 DNAJB1P25685 340 aa18.36■□□□□ 0.53
VAMP4-204ENST00000482519 HOXA11P31270 313 aaPredicted RBP18.36■□□□□ 0.53
VAMP4-204ENST00000482519 RAB27AP51159 221 aa18.36■□□□□ 0.53
VAMP4-204ENST00000482519 MBTD1Q05BQ5 628 aa18.36■□□□□ 0.53
VAMP4-204ENST00000482519 NAALADL2Q58DX5 795 aa18.36■□□□□ 0.53
VAMP4-204ENST00000482519 BRAPQ7Z569 592 aa18.36■□□□□ 0.53
VAMP4-204ENST00000482519 SPPL3Q8TCT6 385 aa18.36■□□□□ 0.53
VAMP4-204ENST00000482519 MICAL1Q8TDZ2 1067 aa18.36■□□□□ 0.53
VAMP4-204ENST00000482519 TRAIPQ9BWF2 469 aa18.36■□□□□ 0.53
VAMP4-204ENST00000482519 DNM3Q9UQ16 869 aa18.36■□□□□ 0.53
VAMP4-204ENST00000482519 MEIS3P2A8K0S8 358 aa18.35■□□□□ 0.53
VAMP4-204ENST00000482519 FGF18O76093 207 aa18.35■□□□□ 0.53
VAMP4-204ENST00000482519 LIG1P18858 919 aa18.35■□□□□ 0.53
VAMP4-204ENST00000482519 PBX3P40426 434 aa18.35■□□□□ 0.53
VAMP4-204ENST00000482519 KCNQ1P51787 676 aa18.35■□□□□ 0.53
VAMP4-204ENST00000482519 POU5F1BQ06416 359 aa18.35■□□□□ 0.53
VAMP4-204ENST00000482519 GLB1LQ6UWU2 654 aa18.35■□□□□ 0.53
VAMP4-204ENST00000482519 POF1BQ8WVV4 589 aa18.35■□□□□ 0.53
VAMP4-204ENST00000482519 SYMPKQ92797 1274 aaKnown RBP18.35■□□□□ 0.53
VAMP4-204ENST00000482519 PGBD4Q96DM1 585 aa18.35■□□□□ 0.53
VAMP4-204ENST00000482519 PLIN2Q99541 437 aa18.35■□□□□ 0.53
VAMP4-204ENST00000482519 IGFLR1Q9H665 355 aa18.35■□□□□ 0.53
VAMP4-204ENST00000482519 XIRP2A4UGR9 3374 aa18.35■□□□□ 0.53
VAMP4-204ENST00000482519 SPTBN5Q9NRC6 3674 aaKnown RBP18.35■□□□□ 0.53
VAMP4-204ENST00000482519 VCANP13611 3396 aa18.34■□□□□ 0.53
VAMP4-204ENST00000482519 CUL9Q8IWT3 2517 aa18.34■□□□□ 0.53
VAMP4-204ENST00000482519 B4GALT5O43286 388 aa18.34■□□□□ 0.53
VAMP4-204ENST00000482519 SYT1P21579 422 aa18.34■□□□□ 0.53
VAMP4-204ENST00000482519 KCNA5P22460 613 aa18.34■□□□□ 0.53
VAMP4-204ENST00000482519 CAMK1Q14012 370 aa18.34■□□□□ 0.53
VAMP4-204ENST00000482519 PCBP1Q15365 356 aaKnown RBP eCLIP18.34■□□□□ 0.536e-6■□□□□ 9.5
VAMP4-204ENST00000482519 UBXN11Q5T124 520 aa18.34■□□□□ 0.53
VAMP4-204ENST00000482519 NOTUMQ6P988 496 aa18.34■□□□□ 0.53
VAMP4-204ENST00000482519 KCNT2Q6UVM3 1135 aa18.34■□□□□ 0.53
VAMP4-204ENST00000482519 ZBTB8OSQ8IWT0 167 aa18.34■□□□□ 0.53
VAMP4-204ENST00000482519 INTS4Q96HW7 963 aaKnown RBP18.34■□□□□ 0.53
VAMP4-204ENST00000482519 ZNF558Q96NG5 402 aa18.34■□□□□ 0.53
VAMP4-204ENST00000482519 MMTAG2Q9BU76 263 aaKnown RBP18.34■□□□□ 0.53
VAMP4-204ENST00000482519 MRPL9Q9BYD2 267 aaKnown RBP18.34■□□□□ 0.53
VAMP4-204ENST00000482519 UBE2ZQ9H832 354 aaPredicted RBP18.34■□□□□ 0.53
VAMP4-204ENST00000482519 PLXNA4Q9HCM2 1894 aa18.34■□□□□ 0.53
VAMP4-204ENST00000482519 ATG2AQ2TAZ0 1938 aa18.33■□□□□ 0.53
VAMP4-204ENST00000482519 ZNF623O75123 536 aa18.33■□□□□ 0.52
VAMP4-204ENST00000482519 SSBP05455 408 aaKnown RBP eCLIP18.33■□□□□ 0.52
VAMP4-204ENST00000482519 AXLP30530 894 aa18.33■□□□□ 0.52
VAMP4-204ENST00000482519 RNASELQ05823 741 aaKnown RBP18.33■□□□□ 0.52
VAMP4-204ENST00000482519 CSPP1Q1MSJ5 1256 aa18.33■□□□□ 0.52
VAMP4-204ENST00000482519 TMEM132AQ24JP5 1023 aa18.33■□□□□ 0.52
VAMP4-204ENST00000482519 NOMO2Q5JPE7 1267 aa18.33■□□□□ 0.52
VAMP4-204ENST00000482519 ARL6IP4Q66PJ3 421 aaKnown RBP18.33■□□□□ 0.52
VAMP4-204ENST00000482519 IFNLR1Q8IU57 520 aaPredicted RBP18.33■□□□□ 0.52
VAMP4-204ENST00000482519 DEPTORQ8TB45 409 aa18.33■□□□□ 0.52
VAMP4-204ENST00000482519 BSNDQ8WZ55 320 aa18.33■□□□□ 0.52
VAMP4-204ENST00000482519 CDK5RAP3Q96JB5 506 aa18.33■□□□□ 0.52
VAMP4-204ENST00000482519 EIF2AQ9BY44 585 aaKnown RBP18.33■□□□□ 0.52
VAMP4-204ENST00000482519 NFKBIZQ9BYH8 718 aa18.33■□□□□ 0.52
VAMP4-204ENST00000482519 TRIM6Q9C030 488 aaPredicted RBP18.33■□□□□ 0.52
VAMP4-204ENST00000482519 TCF20Q9UGU0 1960 aaKnown RBP18.33■□□□□ 0.52
VAMP4-204ENST00000482519 BRWD1Q9NSI6 2320 aa18.32■□□□□ 0.52
VAMP4-204ENST00000482519 OFD1O75665 1012 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms