RNA–Protein interactions for RNA: ENST00000481484.1

VPS13D-208, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 360 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-208ENST00000481484 ATP9AO75110 1047 aa4.68□□□□□ -1.66
VPS13D-208ENST00000481484 DGKIO75912 1065 aa4.68□□□□□ -1.66
VPS13D-208ENST00000481484 C22orf31O95567 290 aa4.68□□□□□ -1.66
VPS13D-208ENST00000481484 CHRNA1P02708 482 aa4.68□□□□□ -1.66
VPS13D-208ENST00000481484 NEFLP07196 543 aa4.68□□□□□ -1.66
VPS13D-208ENST00000481484 ALADP13716 330 aa4.68□□□□□ -1.66
VPS13D-208ENST00000481484 INSRRP14616 1297 aa4.68□□□□□ -1.66
VPS13D-208ENST00000481484 GCFC2P16383 781 aaKnown RBP4.68□□□□□ -1.66
VPS13D-208ENST00000481484 XBP1P17861 261 aa4.68□□□□□ -1.66
VPS13D-208ENST00000481484 LAG3P18627 525 aa4.68□□□□□ -1.66
VPS13D-208ENST00000481484 KCNA5P22460 613 aa4.68□□□□□ -1.66
VPS13D-208ENST00000481484 RPS6KB1P23443 525 aa4.68□□□□□ -1.66
VPS13D-208ENST00000481484 BMPR1AP36894 532 aa4.68□□□□□ -1.66
VPS13D-208ENST00000481484 SARSP49591 514 aaKnown RBP4.68□□□□□ -1.66
VPS13D-208ENST00000481484 KCNQ1P51787 676 aa4.68□□□□□ -1.66
VPS13D-208ENST00000481484 EVCP57679 992 aa4.68□□□□□ -1.66
VPS13D-208ENST00000481484 IGBP1P78318 339 aa4.68□□□□□ -1.66
VPS13D-208ENST00000481484 IRX6P78412 446 aaPredicted RBP4.68□□□□□ -1.66
VPS13D-208ENST00000481484 TFF2Q03403 129 aa4.68□□□□□ -1.66
VPS13D-208ENST00000481484 ITGB3BPQ13352 177 aaPredicted RBP4.68□□□□□ -1.66
VPS13D-208ENST00000481484 SMAD4Q13485 552 aaKnown RBP4.68□□□□□ -1.66
VPS13D-208ENST00000481484 GPM6BQ13491 265 aa4.68□□□□□ -1.66
VPS13D-208ENST00000481484 BTG3Q14201 252 aaPredicted RBP4.68□□□□□ -1.66
VPS13D-208ENST00000481484 PLCB4Q15147 1175 aa4.68□□□□□ -1.66
VPS13D-208ENST00000481484 TCTN1Q2MV58 587 aa4.68□□□□□ -1.66
VPS13D-208ENST00000481484 TMEM31Q5JXX7 168 aa4.68□□□□□ -1.66
VPS13D-208ENST00000481484 MARCH8Q5T0T0 291 aa4.68□□□□□ -1.66
VPS13D-208ENST00000481484 PDE12Q6L8Q7 609 aaKnown RBP4.68□□□□□ -1.66
VPS13D-208ENST00000481484 FAM117BQ6P1L5 589 aa4.68□□□□□ -1.66
VPS13D-208ENST00000481484 MTHFD1LQ6UB35 978 aa4.68□□□□□ -1.66
VPS13D-208ENST00000481484 ABHD15Q6UXT9 468 aa4.68□□□□□ -1.66
VPS13D-208ENST00000481484 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.68□□□□□ -1.665e-8■■□□□ 12.9
VPS13D-208ENST00000481484 RUFY4Q6ZNE9 571 aa4.68□□□□□ -1.66
VPS13D-208ENST00000481484 PLA2G4DQ86XP0 818 aa4.68□□□□□ -1.66
VPS13D-208ENST00000481484 CCDC60Q8IWA6 550 aaPredicted RBP4.68□□□□□ -1.66
VPS13D-208ENST00000481484 EXOC8Q8IYI6 725 aa4.68□□□□□ -1.66
VPS13D-208ENST00000481484 LRRC43Q8N309 656 aa4.68□□□□□ -1.66
VPS13D-208ENST00000481484 DAGLBQ8NCG7 672 aa4.68□□□□□ -1.66
VPS13D-208ENST00000481484 NEK9Q8TD19 979 aa4.68□□□□□ -1.66
VPS13D-208ENST00000481484 PPP1R13LQ8WUF5 828 aa4.68□□□□□ -1.66
VPS13D-208ENST00000481484 DNAJB3Q8WWF6 145 aa4.68□□□□□ -1.66
VPS13D-208ENST00000481484 BRF1Q92994 677 aa4.68□□□□□ -1.66
VPS13D-208ENST00000481484 ZNF689Q96CS4 500 aaPredicted RBP4.68□□□□□ -1.66
VPS13D-208ENST00000481484 CCDC136Q96JN2 1154 aa4.68□□□□□ -1.66
VPS13D-208ENST00000481484 CDCA3Q99618 268 aaPredicted RBP4.68□□□□□ -1.66
VPS13D-208ENST00000481484 C17orf80Q9BSJ5 609 aa4.68□□□□□ -1.66
VPS13D-208ENST00000481484 ZNF577Q9BSK1 485 aa4.68□□□□□ -1.66
VPS13D-208ENST00000481484 MRPL9Q9BYD2 267 aaKnown RBP4.68□□□□□ -1.66
VPS13D-208ENST00000481484 LRRC2Q9BYS8 371 aa4.68□□□□□ -1.66
VPS13D-208ENST00000481484 CELF4Q9BZC1 486 aaKnown RBP4.68□□□□□ -1.66
VPS13D-208ENST00000481484 UPF3BQ9BZI7 483 aaKnown RBP4.68□□□□□ -1.66
VPS13D-208ENST00000481484 TM6SF1Q9BZW5 370 aa4.68□□□□□ -1.66
VPS13D-208ENST00000481484 FAM49AQ9H0Q0 323 aaPredicted RBP4.68□□□□□ -1.66
VPS13D-208ENST00000481484 KCNH6Q9H252 994 aa4.68□□□□□ -1.66
VPS13D-208ENST00000481484 ELAC1Q9H777 363 aaKnown RBP4.68□□□□□ -1.66
VPS13D-208ENST00000481484 POLMQ9NP87 494 aaPredicted RBP4.68□□□□□ -1.66
VPS13D-208ENST00000481484 ZNF302Q9NR11 478 aa4.68□□□□□ -1.66
VPS13D-208ENST00000481484 NAP1L2Q9ULW6 460 aaPredicted RBP4.68□□□□□ -1.66
VPS13D-208ENST00000481484 LZTS1Q9Y250 596 aa4.68□□□□□ -1.66
VPS13D-208ENST00000481484 PCDHA10Q9Y5I2 948 aa4.68□□□□□ -1.66
VPS13D-208ENST00000481484 WDR87Q6ZQQ6 2873 aa4.68□□□□□ -1.66
VPS13D-208ENST00000481484 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.67□□□□□ -1.66
VPS13D-208ENST00000481484 A0A1W2PRU2 124 aa4.67□□□□□ -1.66
VPS13D-208ENST00000481484 GAS7O60861 476 aa4.67□□□□□ -1.66
VPS13D-208ENST00000481484 RPS6KA5O75582 802 aa4.67□□□□□ -1.66
VPS13D-208ENST00000481484 DEXIO95424 95 aa4.67□□□□□ -1.66
VPS13D-208ENST00000481484 LINC00271P0C7V0 271 aa4.67□□□□□ -1.66
VPS13D-208ENST00000481484 SKIP12755 728 aa4.67□□□□□ -1.66
VPS13D-208ENST00000481484 SFPQP23246 707 aaKnown RBP eCLIP4.67□□□□□ -1.66
VPS13D-208ENST00000481484 CD52P31358 61 aa4.67□□□□□ -1.66
VPS13D-208ENST00000481484 GPC1P35052 558 aa4.67□□□□□ -1.66
VPS13D-208ENST00000481484 PLA2G5P39877 138 aa4.67□□□□□ -1.66
VPS13D-208ENST00000481484 SCTRP47872 440 aa4.67□□□□□ -1.66
VPS13D-208ENST00000481484 RAB27AP51159 221 aa4.67□□□□□ -1.66
VPS13D-208ENST00000481484 USP11P51784 963 aa4.67□□□□□ -1.66
VPS13D-208ENST00000481484 CRYBB1P53674 252 aaPredicted RBP4.67□□□□□ -1.66
VPS13D-208ENST00000481484 ANAPC15P60006 121 aa4.67□□□□□ -1.66
VPS13D-208ENST00000481484 PRKCEQ02156 737 aa4.67□□□□□ -1.66
VPS13D-208ENST00000481484 ZP2Q05996 745 aa4.67□□□□□ -1.66
VPS13D-208ENST00000481484 MCM6Q14566 821 aa4.67□□□□□ -1.66
VPS13D-208ENST00000481484 BMS1Q14692 1282 aaKnown RBP4.67□□□□□ -1.66
VPS13D-208ENST00000481484 ANKRD1Q15327 319 aa4.67□□□□□ -1.66
VPS13D-208ENST00000481484 PCBP1Q15365 356 aaKnown RBP eCLIP4.67□□□□□ -1.66
VPS13D-208ENST00000481484 PKN1Q16512 942 aa4.67□□□□□ -1.66
VPS13D-208ENST00000481484 TCEAL5Q5H9L2 206 aa4.67□□□□□ -1.66
VPS13D-208ENST00000481484 Q6ZUG5 572 aa4.67□□□□□ -1.66
VPS13D-208ENST00000481484 SLC24A5Q71RS6 500 aa4.67□□□□□ -1.66
VPS13D-208ENST00000481484 KRT25Q7Z3Z0 450 aa4.67□□□□□ -1.66
VPS13D-208ENST00000481484 ZNF410Q86VK4 478 aa4.67□□□□□ -1.66
VPS13D-208ENST00000481484 ADHFE1Q8IWW8 467 aa4.67□□□□□ -1.66
VPS13D-208ENST00000481484 FAM178BQ8IXR5 827 aa4.67□□□□□ -1.66
VPS13D-208ENST00000481484 CKAP2LQ8IYA6 745 aa4.67□□□□□ -1.66
VPS13D-208ENST00000481484 CMTR1Q8N1G2 835 aaKnown RBP4.67□□□□□ -1.66
VPS13D-208ENST00000481484 CCDC82Q8N4S0 544 aa4.67□□□□□ -1.66
VPS13D-208ENST00000481484 GPR161Q8N6U8 529 aaKnown RBP4.67□□□□□ -1.66
VPS13D-208ENST00000481484 LINC01599Q8WXQ3 324 aa4.67□□□□□ -1.66
VPS13D-208ENST00000481484 WASF1Q92558 559 aa4.67□□□□□ -1.66
VPS13D-208ENST00000481484 PCYT2Q99447 389 aa4.67□□□□□ -1.66
VPS13D-208ENST00000481484 TEKT3Q9BXF9 490 aa4.67□□□□□ -1.66
VPS13D-208ENST00000481484 GDPD2Q9HCC8 539 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms