RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 A0A087X0B3 334 aa7.63□□□□□ -1.19
BRCA1-215ENST00000478531 LCHNA4D1U4 455 aa7.63□□□□□ -1.19
BRCA1-215ENST00000478531 CCDC169A6NNP5 214 aa7.63□□□□□ -1.19
BRCA1-215ENST00000478531 SLC26A4O43511 780 aa7.63□□□□□ -1.19
BRCA1-215ENST00000478531 CUTAO60888 179 aa7.63□□□□□ -1.19
BRCA1-215ENST00000478531 GJB5O95377 273 aa7.63□□□□□ -1.19
BRCA1-215ENST00000478531 KRT18P05783 430 aaKnown RBP7.63□□□□□ -1.19
BRCA1-215ENST00000478531 STAT6P42226 847 aa7.63□□□□□ -1.19
BRCA1-215ENST00000478531 SLC12A3P55017 1021 aa7.63□□□□□ -1.19
BRCA1-215ENST00000478531 PTENP60484 403 aa7.63□□□□□ -1.19
BRCA1-215ENST00000478531 ZNF697Q5TEC3 545 aa7.63□□□□□ -1.19
BRCA1-215ENST00000478531 RRAGBQ5VZM2 374 aa7.63□□□□□ -1.19
BRCA1-215ENST00000478531 PPP2R2DQ66LE6 453 aa7.63□□□□□ -1.19
BRCA1-215ENST00000478531 TWF2Q6IBS0 349 aaKnown RBP7.63□□□□□ -1.19
BRCA1-215ENST00000478531 C1orf186Q6ZWK4 172 aa7.63□□□□□ -1.19
BRCA1-215ENST00000478531 SRGAP1Q7Z6B7 1085 aa7.63□□□□□ -1.19
BRCA1-215ENST00000478531 RTN4RL1Q86UN2 441 aaPredicted RBP7.63□□□□□ -1.19
BRCA1-215ENST00000478531 SYT2Q8N9I0 419 aaPredicted RBP7.63□□□□□ -1.19
BRCA1-215ENST00000478531 LEO1Q8WVC0 666 aaPredicted RBP7.63□□□□□ -1.19
BRCA1-215ENST00000478531 LARP4BQ92615 738 aaKnown RBP7.63□□□□□ -1.19
BRCA1-215ENST00000478531 KIFAP3Q92845 792 aa7.63□□□□□ -1.19
BRCA1-215ENST00000478531 DRC1Q96MC2 740 aa7.63□□□□□ -1.19
BRCA1-215ENST00000478531 GDPD2Q9HCC8 539 aa7.63□□□□□ -1.19
BRCA1-215ENST00000478531 BLOC1S4Q9NUP1 217 aa7.63□□□□□ -1.19
BRCA1-215ENST00000478531 LRFN2Q9ULH4 789 aa7.63□□□□□ -1.19
BRCA1-215ENST00000478531 PCDHA7Q9UN72 937 aa7.63□□□□□ -1.19
BRCA1-215ENST00000478531 PCDHA11Q9Y5I1 949 aa7.63□□□□□ -1.19
BRCA1-215ENST00000478531 MORC2Q9Y6X9 1032 aaPredicted RBP7.63□□□□□ -1.19
BRCA1-215ENST00000478531 RALGAPA2Q2PPJ7 1873 aa7.63□□□□□ -1.19
BRCA1-215ENST00000478531 SFI1A8K8P3 1242 aa7.62□□□□□ -1.19
BRCA1-215ENST00000478531 DDIT3P35638 169 aa7.62□□□□□ -1.19
BRCA1-215ENST00000478531 PEX3P56589 373 aa7.62□□□□□ -1.19
BRCA1-215ENST00000478531 MBTD1Q05BQ5 628 aa7.62□□□□□ -1.19
BRCA1-215ENST00000478531 DMP1Q13316 513 aaPredicted RBP7.62□□□□□ -1.19
BRCA1-215ENST00000478531 PPP2R5AQ15172 486 aa7.62□□□□□ -1.19
BRCA1-215ENST00000478531 LONRF3Q496Y0 759 aa7.62□□□□□ -1.19
BRCA1-215ENST00000478531 AXDND1Q5T1B0 1012 aaPredicted RBP7.62□□□□□ -1.19
BRCA1-215ENST00000478531 SHC4Q6S5L8 630 aa7.62□□□□□ -1.19
BRCA1-215ENST00000478531 ZBTB8OSQ8IWT0 167 aa7.62□□□□□ -1.19
BRCA1-215ENST00000478531 DAW1Q8N136 415 aa7.62□□□□□ -1.19
BRCA1-215ENST00000478531 DEFB123Q8N688 67 aa7.62□□□□□ -1.19
BRCA1-215ENST00000478531 DEPTORQ8TB45 409 aa7.62□□□□□ -1.19
BRCA1-215ENST00000478531 TOP1MTQ969P6 601 aa7.62□□□□□ -1.19
BRCA1-215ENST00000478531 CPB2Q96IY4 423 aa7.62□□□□□ -1.19
BRCA1-215ENST00000478531 ZHX3Q9H4I2 956 aa7.62□□□□□ -1.19
BRCA1-215ENST00000478531 CERS4Q9HA82 394 aa7.62□□□□□ -1.19
BRCA1-215ENST00000478531 SLC28A3Q9HAS3 691 aa7.62□□□□□ -1.19
BRCA1-215ENST00000478531 RGS18Q9NS28 235 aa7.62□□□□□ -1.19
BRCA1-215ENST00000478531 MTUS1Q9ULD2 1270 aa7.62□□□□□ -1.19
BRCA1-215ENST00000478531 COL4A6Q14031 1691 aa7.62□□□□□ -1.19
BRCA1-215ENST00000478531 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.62□□□□□ -1.19
BRCA1-215ENST00000478531 B4GALT5O43286 388 aa7.62□□□□□ -1.19
BRCA1-215ENST00000478531 TBCAO75347 108 aaKnown RBP7.62□□□□□ -1.19
BRCA1-215ENST00000478531 ARHGEF15O94989 841 aa7.62□□□□□ -1.19
BRCA1-215ENST00000478531 GUCY2CP25092 1073 aa7.62□□□□□ -1.19
BRCA1-215ENST00000478531 NAMPTP43490 491 aa7.62□□□□□ -1.19
BRCA1-215ENST00000478531 SARSP49591 514 aaKnown RBP7.62□□□□□ -1.19
BRCA1-215ENST00000478531 GATMP50440 423 aa7.62□□□□□ -1.19
BRCA1-215ENST00000478531 MAPK7Q13164 816 aa7.62□□□□□ -1.19
BRCA1-215ENST00000478531 DSC3Q14574 896 aa7.62□□□□□ -1.19
BRCA1-215ENST00000478531 PAN2Q504Q3 1202 aaKnown RBP7.62□□□□□ -1.19
BRCA1-215ENST00000478531 ARSHQ5FYA8 562 aa7.62□□□□□ -1.19
BRCA1-215ENST00000478531 CDCA2Q69YH5 1023 aaPredicted RBP7.62□□□□□ -1.19
BRCA1-215ENST00000478531 CCDC73Q6ZRK6 1079 aa7.62□□□□□ -1.19
BRCA1-215ENST00000478531 SLC24A5Q71RS6 500 aa7.62□□□□□ -1.19
BRCA1-215ENST00000478531 DYMQ7RTS9 669 aa7.62□□□□□ -1.19
BRCA1-215ENST00000478531 SPRED2Q7Z698 418 aa7.62□□□□□ -1.19
BRCA1-215ENST00000478531 NPAS4Q8IUM7 802 aa7.62□□□□□ -1.19
BRCA1-215ENST00000478531 KCTD17Q8N5Z5 321 aa7.62□□□□□ -1.19
BRCA1-215ENST00000478531 DHX58Q96C10 678 aa7.62□□□□□ -1.19
BRCA1-215ENST00000478531 RAD9AQ99638 391 aa7.62□□□□□ -1.19
BRCA1-215ENST00000478531 REEP2Q9BRK0 252 aa7.62□□□□□ -1.19
BRCA1-215ENST00000478531 SCAND2PQ9GZW5 306 aaPredicted RBP7.62□□□□□ -1.19
BRCA1-215ENST00000478531 C2orf40Q9H1Z8 148 aa7.62□□□□□ -1.19
BRCA1-215ENST00000478531 TTYH1Q9H313 450 aaPredicted RBP7.62□□□□□ -1.19
BRCA1-215ENST00000478531 C1orf112Q9NSG2 853 aa7.62□□□□□ -1.19
BRCA1-215ENST00000478531 AGPAT5Q9NUQ2 364 aa7.62□□□□□ -1.19
BRCA1-215ENST00000478531 DACT1Q9NYF0 836 aa7.62□□□□□ -1.19
BRCA1-215ENST00000478531 STK17AQ9UEE5 414 aa7.62□□□□□ -1.19
BRCA1-215ENST00000478531 RCOR1Q9UKL0 485 aa7.62□□□□□ -1.19
BRCA1-215ENST00000478531 INSL6Q9Y581 213 aa7.62□□□□□ -1.19
BRCA1-215ENST00000478531 PCDHB7Q9Y5E2 793 aa7.62□□□□□ -1.19
BRCA1-215ENST00000478531 ADGRA3Q8IWK6 1321 aa7.62□□□□□ -1.19
BRCA1-215ENST00000478531 TDRD15B5MCY1 1934 aaKnown RBP7.62□□□□□ -1.19
BRCA1-215ENST00000478531 C9IYK1 514 aa7.61□□□□□ -1.19
BRCA1-215ENST00000478531 SLC16A4O15374 487 aa7.61□□□□□ -1.19
BRCA1-215ENST00000478531 TSPAN1O60635 241 aa7.61□□□□□ -1.19
BRCA1-215ENST00000478531 FAM13AO94988 1023 aa7.61□□□□□ -1.19
BRCA1-215ENST00000478531 PRKCBP05771 671 aa7.61□□□□□ -1.19
BRCA1-215ENST00000478531 STAG3L1P0CL83 205 aa7.61□□□□□ -1.19
BRCA1-215ENST00000478531 FGFR1P11362 822 aa7.61□□□□□ -1.19
BRCA1-215ENST00000478531 NPTX2P47972 431 aa7.61□□□□□ -1.19
BRCA1-215ENST00000478531 NAALADL2Q58DX5 795 aa7.61□□□□□ -1.19
BRCA1-215ENST00000478531 RESP18Q5W5W9 173 aa7.61□□□□□ -1.19
BRCA1-215ENST00000478531 SV2BQ7L1I2 683 aa7.61□□□□□ -1.19
BRCA1-215ENST00000478531 CDR2LQ86X02 465 aaPredicted RBP7.61□□□□□ -1.19
BRCA1-215ENST00000478531 STAMQ92783 540 aa7.61□□□□□ -1.19
BRCA1-215ENST00000478531 TIPINQ9BVW5 301 aa7.61□□□□□ -1.19
BRCA1-215ENST00000478531 NFKBIZQ9BYH8 718 aa7.61□□□□□ -1.19
BRCA1-215ENST00000478531 ZNF576Q9H609 170 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms