RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 TBC1D13Q9NVG8 400 aa8.37□□□□□ -1.07
SPTLC1-205ENST00000477888 STK39Q9UEW8 545 aa8.37□□□□□ -1.07
SPTLC1-205ENST00000477888 RAB23Q9ULC3 237 aa8.37□□□□□ -1.07
SPTLC1-205ENST00000477888 ZFP37Q9Y6Q3 630 aaPredicted RBP8.37□□□□□ -1.07
SPTLC1-205ENST00000477888 CNOT1A5YKK6 2376 aaKnown RBP8.37□□□□□ -1.07
SPTLC1-205ENST00000477888 SHISA7A6NL88 538 aa8.36□□□□□ -1.07
SPTLC1-205ENST00000477888 TEX28O15482 410 aa8.36□□□□□ -1.07
SPTLC1-205ENST00000477888 B4GALT3O60512 393 aa8.36□□□□□ -1.07
SPTLC1-205ENST00000477888 FOXD2O60548 495 aaPredicted RBP8.36□□□□□ -1.07
SPTLC1-205ENST00000477888 SSBP05455 408 aaKnown RBP eCLIP8.36□□□□□ -1.07
SPTLC1-205ENST00000477888 MX1P20591 662 aa8.36□□□□□ -1.07
SPTLC1-205ENST00000477888 ATP4AP20648 1035 aa8.36□□□□□ -1.07
SPTLC1-205ENST00000477888 TARSP26639 723 aaKnown RBP8.36□□□□□ -1.07
SPTLC1-205ENST00000477888 SLC11A1P49279 550 aa8.36□□□□□ -1.07
SPTLC1-205ENST00000477888 NRLP54845 237 aa8.36□□□□□ -1.07
SPTLC1-205ENST00000477888 RING1Q06587 406 aa8.36□□□□□ -1.07
SPTLC1-205ENST00000477888 GRM4Q14833 912 aa8.36□□□□□ -1.07
SPTLC1-205ENST00000477888 ZNF484Q5JVG2 852 aa8.36□□□□□ -1.07
SPTLC1-205ENST00000477888 IFIT1BQ5T764 474 aaKnown RBP8.36□□□□□ -1.07
SPTLC1-205ENST00000477888 IL31Q6EBC2 164 aa8.36□□□□□ -1.07
SPTLC1-205ENST00000477888 TICAM2Q86XR7 235 aa8.36□□□□□ -1.07
SPTLC1-205ENST00000477888 CUL5Q93034 780 aa8.36□□□□□ -1.07
SPTLC1-205ENST00000477888 RPS6KC1Q96S38 1066 aa8.36□□□□□ -1.07
SPTLC1-205ENST00000477888 TRAIPQ9BWF2 469 aa8.36□□□□□ -1.07
SPTLC1-205ENST00000477888 DNAJB4Q9UDY4 337 aa8.36□□□□□ -1.07
SPTLC1-205ENST00000477888 DPP7Q9UHL4 492 aa8.36□□□□□ -1.07
SPTLC1-205ENST00000477888 WASF3Q9UPY6 502 aa8.36□□□□□ -1.07
SPTLC1-205ENST00000477888 COL1A2P08123 1366 aa8.35□□□□□ -1.07
SPTLC1-205ENST00000477888 NFASCO94856 1347 aa8.35□□□□□ -1.07
SPTLC1-205ENST00000477888 SALL3Q9BXA9 1300 aa8.35□□□□□ -1.07
SPTLC1-205ENST00000477888 SRRM3A6NNA2 597 aaPredicted RBP8.35□□□□□ -1.07
SPTLC1-205ENST00000477888 NCAM2O15394 837 aa8.35□□□□□ -1.07
SPTLC1-205ENST00000477888 HRO43593 1189 aa8.35□□□□□ -1.07
SPTLC1-205ENST00000477888 OFD1O75665 1012 aa8.35□□□□□ -1.07
SPTLC1-205ENST00000477888 EFEMP2O95967 443 aa8.35□□□□□ -1.07
SPTLC1-205ENST00000477888 CCNE2O96020 404 aa8.35□□□□□ -1.07
SPTLC1-205ENST00000477888 GLUD1P00367 558 aa8.35□□□□□ -1.07
SPTLC1-205ENST00000477888 C1RP00736 705 aa8.35□□□□□ -1.07
SPTLC1-205ENST00000477888 ADH1AP07327 375 aa8.35□□□□□ -1.07
SPTLC1-205ENST00000477888 MYBP10242 640 aa8.35□□□□□ -1.07
SPTLC1-205ENST00000477888 NLRP11P59045 1033 aaKnown RBP8.35□□□□□ -1.07
SPTLC1-205ENST00000477888 ADCY1Q08828 1119 aa8.35□□□□□ -1.07
SPTLC1-205ENST00000477888 NMIQ13287 307 aaPredicted RBP8.35□□□□□ -1.07
SPTLC1-205ENST00000477888 ITGB3BPQ13352 177 aaPredicted RBP8.35□□□□□ -1.07
SPTLC1-205ENST00000477888 ABHD15Q6UXT9 468 aa8.35□□□□□ -1.07
SPTLC1-205ENST00000477888 GET4Q7L5D6 327 aaPredicted RBP8.35□□□□□ -1.07
SPTLC1-205ENST00000477888 TAS1R1Q7RTX1 841 aa8.35□□□□□ -1.07
SPTLC1-205ENST00000477888 ZNF280BQ86YH2 543 aa8.35□□□□□ -1.07
SPTLC1-205ENST00000477888 ZNF687Q8N1G0 1237 aa8.35□□□□□ -1.07
SPTLC1-205ENST00000477888 METTL13Q8N6R0 699 aa8.35□□□□□ -1.07
SPTLC1-205ENST00000477888 LINC01465Q8N7H1 131 aa8.35□□□□□ -1.07
SPTLC1-205ENST00000477888 HDAC7Q8WUI4 952 aa8.35□□□□□ -1.07
SPTLC1-205ENST00000477888 UBAC1Q9BSL1 405 aa8.35□□□□□ -1.07
SPTLC1-205ENST00000477888 PRKD2Q9BZL6 878 aa8.35□□□□□ -1.07
SPTLC1-205ENST00000477888 RXFP1Q9HBX9 757 aa8.35□□□□□ -1.07
SPTLC1-205ENST00000477888 FAM217BQ9NTX9 383 aaPredicted RBP8.35□□□□□ -1.07
SPTLC1-205ENST00000477888 MEIS3P2A8K0S8 358 aa8.34□□□□□ -1.07
SPTLC1-205ENST00000477888 TAF4O00268 1085 aa8.34□□□□□ -1.07
SPTLC1-205ENST00000477888 C2CD2LO14523 706 aa8.34□□□□□ -1.07
SPTLC1-205ENST00000477888 KCNK5O95279 499 aa8.34□□□□□ -1.07
SPTLC1-205ENST00000477888 ALDH2P05091 517 aa8.34□□□□□ -1.07
SPTLC1-205ENST00000477888 SPATA31D3P0C874 917 aa8.34□□□□□ -1.07
SPTLC1-205ENST00000477888 DARSP14868 501 aaKnown RBP8.34□□□□□ -1.07
SPTLC1-205ENST00000477888 PHKA2P46019 1235 aa8.34□□□□□ -1.07
SPTLC1-205ENST00000477888 PFKPQ01813 784 aa8.34□□□□□ -1.07
SPTLC1-205ENST00000477888 TROAPQ12815 778 aa8.34□□□□□ -1.07
SPTLC1-205ENST00000477888 SIM2Q14190 667 aaPredicted RBP8.34□□□□□ -1.07
SPTLC1-205ENST00000477888 NOMO2Q5JPE7 1267 aa8.34□□□□□ -1.07
SPTLC1-205ENST00000477888 ELMSAN1Q6PJG2 1045 aa8.34□□□□□ -1.07
SPTLC1-205ENST00000477888 PRR23BQ6ZRT6 265 aa8.34□□□□□ -1.07
SPTLC1-205ENST00000477888 SPATA31D4Q6ZUB0 917 aa8.34□□□□□ -1.07
SPTLC1-205ENST00000477888 CCDC60Q8IWA6 550 aaPredicted RBP8.34□□□□□ -1.07
SPTLC1-205ENST00000477888 RNF168Q8IYW5 571 aaPredicted RBP8.34□□□□□ -1.07
SPTLC1-205ENST00000477888 ZNF710Q8N1W2 664 aa8.34□□□□□ -1.07
SPTLC1-205ENST00000477888 LPPQ93052 612 aa8.34□□□□□ -1.07
SPTLC1-205ENST00000477888 PHKBQ93100 1093 aa8.34□□□□□ -1.07
SPTLC1-205ENST00000477888 MXRA8Q9BRK3 442 aa8.34□□□□□ -1.07
SPTLC1-205ENST00000477888 SDF4Q9BRK5 362 aa8.34□□□□□ -1.07
SPTLC1-205ENST00000477888 LSM14BQ9BX40 385 aaKnown RBP8.34□□□□□ -1.07
SPTLC1-205ENST00000477888 KRT23Q9C075 422 aa8.34□□□□□ -1.07
SPTLC1-205ENST00000477888 PLEKHA4Q9H4M7 779 aa8.34□□□□□ -1.07
SPTLC1-205ENST00000477888 PIDD1Q9HB75 910 aa8.34□□□□□ -1.07
SPTLC1-205ENST00000477888 RXFP3Q9NSD7 469 aa8.34□□□□□ -1.07
SPTLC1-205ENST00000477888 ZDHHC7Q9NXF8 308 aa8.34□□□□□ -1.07
SPTLC1-205ENST00000477888 DACT1Q9NYF0 836 aa8.34□□□□□ -1.07
SPTLC1-205ENST00000477888 CDH7Q9ULB5 785 aa8.34□□□□□ -1.07
SPTLC1-205ENST00000477888 LHX6Q9UPM6 363 aa8.34□□□□□ -1.07
SPTLC1-205ENST00000477888 KAT6AQ92794 2004 aa8.34□□□□□ -1.07
SPTLC1-205ENST00000477888 ASH1LQ9NR48 2969 aaKnown RBP8.34□□□□□ -1.08
SPTLC1-205ENST00000477888 COL4A3Q01955 1670 aa8.34□□□□□ -1.08
SPTLC1-205ENST00000477888 WDFY3Q8IZQ1 3526 aa8.33□□□□□ -1.08
SPTLC1-205ENST00000477888 LOXHD1Q8IVV2 1947 aa8.33□□□□□ -1.08
SPTLC1-205ENST00000477888 TMEM8BA6NDV4 472 aa8.33□□□□□ -1.08
SPTLC1-205ENST00000477888 BACH1O14867 736 aa8.33□□□□□ -1.08
SPTLC1-205ENST00000477888 GAS2O43903 313 aaKnown RBP8.33□□□□□ -1.08
SPTLC1-205ENST00000477888 ZNF623O75123 536 aa8.33□□□□□ -1.08
SPTLC1-205ENST00000477888 DDHD2O94830 711 aa8.33□□□□□ -1.08
SPTLC1-205ENST00000477888 SOD2P04179 222 aa8.33□□□□□ -1.08
SPTLC1-205ENST00000477888 IGF2RP11717 2491 aa8.33□□□□□ -1.08
SPTLC1-205ENST00000477888 FGFR4P22455 802 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms