RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 FERP16591 822 aa8.66□□□□□ -1.02
VMA21-203ENST00000477649 UBA1P22314 1058 aaKnown RBP8.66□□□□□ -1.02
VMA21-203ENST00000477649 PRKCIP41743 596 aa8.66□□□□□ -1.02
VMA21-203ENST00000477649 NAMPTP43490 491 aa8.66□□□□□ -1.02
VMA21-203ENST00000477649 NPTX2P47972 431 aa8.66□□□□□ -1.02
VMA21-203ENST00000477649 FMO5P49326 533 aa8.66□□□□□ -1.02
VMA21-203ENST00000477649 STAT5BP51692 787 aa8.66□□□□□ -1.02
VMA21-203ENST00000477649 POLGP54098 1239 aaPredicted RBP8.66□□□□□ -1.02
VMA21-203ENST00000477649 C1QTNF8P60827 252 aa8.66□□□□□ -1.02
VMA21-203ENST00000477649 CNTN2Q02246 1040 aa8.66□□□□□ -1.02
VMA21-203ENST00000477649 BFSP1Q12934 665 aa8.66□□□□□ -1.02
VMA21-203ENST00000477649 STRN3Q13033 797 aa8.66□□□□□ -1.02
VMA21-203ENST00000477649 TTLL4Q14679 1199 aa8.66□□□□□ -1.02
VMA21-203ENST00000477649 MTF1Q14872 753 aa8.66□□□□□ -1.02
VMA21-203ENST00000477649 ASIC2Q16515 512 aa8.66□□□□□ -1.02
VMA21-203ENST00000477649 ZC2HC1CQ53FD0 456 aaPredicted RBP8.66□□□□□ -1.02
VMA21-203ENST00000477649 DCAF17Q5H9S7 520 aaPredicted RBP8.66□□□□□ -1.02
VMA21-203ENST00000477649 UTP14CQ5TAP6 766 aaKnown RBP8.66□□□□□ -1.02
VMA21-203ENST00000477649 KLHDC7AQ5VTJ3 777 aa8.66□□□□□ -1.02
VMA21-203ENST00000477649 TCERG1LQ5VWI1 586 aa8.66□□□□□ -1.02
VMA21-203ENST00000477649 SEPT14Q6ZU15 432 aa8.66□□□□□ -1.02
VMA21-203ENST00000477649 CYFIP1Q7L576 1253 aa8.66□□□□□ -1.02
VMA21-203ENST00000477649 CCDC60Q8IWA6 550 aaPredicted RBP8.66□□□□□ -1.02
VMA21-203ENST00000477649 RNF10Q8N5U6 811 aaKnown RBP8.66□□□□□ -1.02
VMA21-203ENST00000477649 TMC2Q8TDI7 906 aa8.66□□□□□ -1.02
VMA21-203ENST00000477649 SMCR8Q8TEV9 937 aaPredicted RBP8.66□□□□□ -1.02
VMA21-203ENST00000477649 SCFD2Q8WU76 684 aa8.66□□□□□ -1.02
VMA21-203ENST00000477649 BBXQ8WY36 941 aaPredicted RBP8.66□□□□□ -1.02
VMA21-203ENST00000477649 CALR3Q96L12 384 aaKnown RBP8.66□□□□□ -1.02
VMA21-203ENST00000477649 PURBQ96QR8 312 aaKnown RBP8.66□□□□□ -1.02
VMA21-203ENST00000477649 SPAG5Q96R06 1193 aa8.66□□□□□ -1.02
VMA21-203ENST00000477649 PARK7Q99497 189 aaKnown RBP8.66□□□□□ -1.02
VMA21-203ENST00000477649 CHP1Q99653 195 aa8.66□□□□□ -1.02
VMA21-203ENST00000477649 DESI2Q9BSY9 194 aa8.66□□□□□ -1.02
VMA21-203ENST00000477649 PORCNQ9H237 461 aa8.66□□□□□ -1.02
VMA21-203ENST00000477649 GANQ9H2C0 597 aa8.66□□□□□ -1.02
VMA21-203ENST00000477649 DHX33Q9H6R0 707 aaKnown RBP8.66□□□□□ -1.02
VMA21-203ENST00000477649 MLXIPQ9HAP2 919 aa8.66□□□□□ -1.02
VMA21-203ENST00000477649 VTA1Q9NP79 307 aa8.66□□□□□ -1.02
VMA21-203ENST00000477649 SLC5A4Q9NY91 659 aa8.66□□□□□ -1.02
VMA21-203ENST00000477649 DDX41Q9UJV9 622 aaKnown RBP8.66□□□□□ -1.02
VMA21-203ENST00000477649 POLR2AP24928 1970 aaKnown RBP8.65□□□□□ -1.02
VMA21-203ENST00000477649 DENND3A2RUS2 1198 aa8.65□□□□□ -1.02
VMA21-203ENST00000477649 CCDC169A6NNP5 214 aa8.65□□□□□ -1.02
VMA21-203ENST00000477649 PDHXO00330 501 aa8.65□□□□□ -1.02
VMA21-203ENST00000477649 NOP56O00567 594 aaKnown RBP8.65□□□□□ -1.02
VMA21-203ENST00000477649 CLIC2O15247 247 aa8.65□□□□□ -1.02
VMA21-203ENST00000477649 PJA2O43164 708 aa8.65□□□□□ -1.02
VMA21-203ENST00000477649 NOL4O94818 638 aa8.65□□□□□ -1.02
VMA21-203ENST00000477649 LDHAP00338 332 aaKnown RBP8.65□□□□□ -1.02
VMA21-203ENST00000477649 PIGRP01833 764 aa8.65□□□□□ -1.02
VMA21-203ENST00000477649 TUBBP07437 444 aa8.65□□□□□ -1.02
VMA21-203ENST00000477649 UCHL3P15374 230 aa8.65□□□□□ -1.02
VMA21-203ENST00000477649 PON1P27169 355 aa8.65□□□□□ -1.02
VMA21-203ENST00000477649 MAPK4P31152 587 aa8.65□□□□□ -1.02
VMA21-203ENST00000477649 STAT1P42224 750 aa8.65□□□□□ -1.02
VMA21-203ENST00000477649 ARHGAP25P42331 645 aa8.65□□□□□ -1.02
VMA21-203ENST00000477649 VAMP7P51809 220 aa8.65□□□□□ -1.02
VMA21-203ENST00000477649 KIF11P52732 1056 aa8.65□□□□□ -1.02
VMA21-203ENST00000477649 EFNA5P52803 228 aa8.65□□□□□ -1.02
VMA21-203ENST00000477649 NPEPPSP55786 919 aa8.65□□□□□ -1.02
VMA21-203ENST00000477649 POLR2FP61218 127 aaKnown RBP8.65□□□□□ -1.02
VMA21-203ENST00000477649 KCNA1Q09470 495 aa8.65□□□□□ -1.02
VMA21-203ENST00000477649 LAMC2Q13753 1193 aa8.65□□□□□ -1.02
VMA21-203ENST00000477649 MXD4Q14582 209 aaPredicted RBP8.65□□□□□ -1.02
VMA21-203ENST00000477649 EMC2Q15006 297 aa8.65□□□□□ -1.02
VMA21-203ENST00000477649 TARBP2Q15633 366 aaKnown RBP8.65□□□□□ -1.02
VMA21-203ENST00000477649 IFI16Q16666 785 aaKnown RBP8.65□□□□□ -1.02
VMA21-203ENST00000477649 CELF3Q5SZQ8 465 aaKnown RBP8.65□□□□□ -1.02
VMA21-203ENST00000477649 IER5Q5VY09 327 aa8.65□□□□□ -1.02
VMA21-203ENST00000477649 CEP112Q8N8E3 955 aa8.65□□□□□ -1.02
VMA21-203ENST00000477649 MNS1Q8NEH6 495 aa8.65□□□□□ -1.02
VMA21-203ENST00000477649 TRIM58Q8NG06 486 aa8.65□□□□□ -1.02
VMA21-203ENST00000477649 KHSRPQ92945 711 aaKnown RBP eCLIP8.65□□□□□ -1.021e-6■■□□□ 12
VMA21-203ENST00000477649 JAKMIP2Q96AA8 810 aa8.65□□□□□ -1.02
VMA21-203ENST00000477649 FBXL18Q96ME1 805 aa8.65□□□□□ -1.02
VMA21-203ENST00000477649 NAPGQ99747 312 aaPredicted RBP8.65□□□□□ -1.02
VMA21-203ENST00000477649 STK33Q9BYT3 514 aa8.65□□□□□ -1.02
VMA21-203ENST00000477649 IFIH1Q9BYX4 1025 aaKnown RBP8.65□□□□□ -1.02
VMA21-203ENST00000477649 C2orf40Q9H1Z8 148 aa8.65□□□□□ -1.02
VMA21-203ENST00000477649 SMARCAD1Q9H4L7 1026 aa8.65□□□□□ -1.02
VMA21-203ENST00000477649 TMEM134Q9H6X4 195 aa8.65□□□□□ -1.02
VMA21-203ENST00000477649 HSPBP1Q9NZL4 362 aa8.65□□□□□ -1.02
VMA21-203ENST00000477649 GCNT4Q9P109 453 aa8.65□□□□□ -1.02
VMA21-203ENST00000477649 ARHGAP28Q9P2N2 729 aa8.65□□□□□ -1.02
VMA21-203ENST00000477649 TSKSQ9UJT2 592 aa8.65□□□□□ -1.02
VMA21-203ENST00000477649 INTUQ9ULD6 942 aa8.65□□□□□ -1.02
VMA21-203ENST00000477649 IVNS1ABPQ9Y6Y0 642 aa8.65□□□□□ -1.02
VMA21-203ENST00000477649 CCL15-CCL14A0A0B4J2E2 113 aa8.64□□□□□ -1.03
VMA21-203ENST00000477649 GSTTP1A0A1W2PQM5 241 aa8.64□□□□□ -1.03
VMA21-203ENST00000477649 RBM47A0AV96 593 aaKnown RBP8.64□□□□□ -1.03
VMA21-203ENST00000477649 BTNL10A8MVZ5 291 aa8.64□□□□□ -1.03
VMA21-203ENST00000477649 EFCAB8A8MWE9 144 aa8.64□□□□□ -1.03
VMA21-203ENST00000477649 NKRFO15226 690 aaKnown RBP eCLIP8.64□□□□□ -1.03
VMA21-203ENST00000477649 SLC16A4O15374 487 aa8.64□□□□□ -1.03
VMA21-203ENST00000477649 ASAP2O43150 1006 aa8.64□□□□□ -1.03
VMA21-203ENST00000477649 ZC3H11AO75152 810 aaKnown RBP eCLIP8.64□□□□□ -1.03
VMA21-203ENST00000477649 TACC1O75410 805 aa8.64□□□□□ -1.03
VMA21-203ENST00000477649 MAFO75444 373 aaPredicted RBP8.64□□□□□ -1.03
VMA21-203ENST00000477649 URI1O94763 535 aaPredicted RBP8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms