RNA–Protein interactions for RNA: ENST00000477485.1

RTFDC1-206, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 464 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-206ENST00000477485 DNAJB4Q9UDY4 337 aa7.52□□□□□ -1.21
RTFDC1-206ENST00000477485 CA14Q9ULX7 337 aa7.52□□□□□ -1.21
RTFDC1-206ENST00000477485 SSUH2Q9Y2M2 353 aa7.52□□□□□ -1.21
RTFDC1-206ENST00000477485 MYO15AQ9UKN7 3530 aa7.52□□□□□ -1.21
RTFDC1-206ENST00000477485 CCDC196A0A1B0GTZ2 297 aa7.51□□□□□ -1.21
RTFDC1-206ENST00000477485 MEIS3P2A8K0S8 358 aa7.51□□□□□ -1.21
RTFDC1-206ENST00000477485 DDX11L8A8MPP1 907 aa7.51□□□□□ -1.21
RTFDC1-206ENST00000477485 ADAMTS3O15072 1205 aa7.51□□□□□ -1.21
RTFDC1-206ENST00000477485 MSH4O15457 936 aa7.51□□□□□ -1.21
RTFDC1-206ENST00000477485 PI15O43692 258 aa7.51□□□□□ -1.21
RTFDC1-206ENST00000477485 NARSO43776 548 aaKnown RBP7.51□□□□□ -1.21
RTFDC1-206ENST00000477485 ZNF862O60290 1169 aa7.51□□□□□ -1.21
RTFDC1-206ENST00000477485 URODP06132 367 aa7.51□□□□□ -1.21
RTFDC1-206ENST00000477485 AOC1P19801 751 aa7.51□□□□□ -1.21
RTFDC1-206ENST00000477485 SFNP31947 248 aa7.51□□□□□ -1.21
RTFDC1-206ENST00000477485 ADD1P35611 737 aaKnown RBP7.51□□□□□ -1.21
RTFDC1-206ENST00000477485 SLC11A1P49279 550 aa7.51□□□□□ -1.21
RTFDC1-206ENST00000477485 JAK3P52333 1124 aa7.51□□□□□ -1.21
RTFDC1-206ENST00000477485 POLGP54098 1239 aaPredicted RBP7.51□□□□□ -1.21
RTFDC1-206ENST00000477485 AK2P54819 239 aa7.51□□□□□ -1.21
RTFDC1-206ENST00000477485 FUT2Q10981 343 aa7.51□□□□□ -1.21
RTFDC1-206ENST00000477485 DRP2Q13474 957 aa7.51□□□□□ -1.21
RTFDC1-206ENST00000477485 PTPN14Q15678 1187 aa7.51□□□□□ -1.21
RTFDC1-206ENST00000477485 DHX32Q7L7V1 743 aaKnown RBP7.51□□□□□ -1.21
RTFDC1-206ENST00000477485 ZNF598Q86UK7 904 aaKnown RBP7.51□□□□□ -1.21
RTFDC1-206ENST00000477485 GLYCTKQ8IVS8 523 aa7.51□□□□□ -1.21
RTFDC1-206ENST00000477485 KSR1Q8IVT5 923 aa7.51□□□□□ -1.21
RTFDC1-206ENST00000477485 TEX2Q8IWB9 1127 aa7.51□□□□□ -1.21
RTFDC1-206ENST00000477485 CCDC105Q8IYK2 499 aa7.51□□□□□ -1.21
RTFDC1-206ENST00000477485 ZNF710Q8N1W2 664 aa7.51□□□□□ -1.21
RTFDC1-206ENST00000477485 LINC01465Q8N7H1 131 aa7.51□□□□□ -1.21
RTFDC1-206ENST00000477485 DTWD2Q8NBA8 298 aa7.51□□□□□ -1.21
RTFDC1-206ENST00000477485 CCDC148Q8NFR7 591 aa7.51□□□□□ -1.21
RTFDC1-206ENST00000477485 BICD2Q8TD16 824 aa7.51□□□□□ -1.21
RTFDC1-206ENST00000477485 SLC22A17Q8WUG5 538 aa7.51□□□□□ -1.21
RTFDC1-206ENST00000477485 BCL7CQ8WUZ0 217 aaPredicted RBP7.51□□□□□ -1.21
RTFDC1-206ENST00000477485 RIN2Q8WYP3 895 aaPredicted RBP7.51□□□□□ -1.21
RTFDC1-206ENST00000477485 PHKBQ93100 1093 aa7.51□□□□□ -1.21
RTFDC1-206ENST00000477485 PGBD4Q96DM1 585 aa7.51□□□□□ -1.21
RTFDC1-206ENST00000477485 RTP3Q9BQQ7 232 aa7.51□□□□□ -1.21
RTFDC1-206ENST00000477485 INO80BQ9C086 356 aaPredicted RBP7.51□□□□□ -1.21
RTFDC1-206ENST00000477485 ZMYND12Q9H0C1 365 aa7.51□□□□□ -1.21
RTFDC1-206ENST00000477485 UNC45AQ9H3U1 944 aa7.51□□□□□ -1.21
RTFDC1-206ENST00000477485 NRDE2Q9H7Z3 1164 aa7.51□□□□□ -1.21
RTFDC1-206ENST00000477485 KCNK12Q9HB15 430 aa7.51□□□□□ -1.21
RTFDC1-206ENST00000477485 PIDD1Q9HB75 910 aa7.51□□□□□ -1.21
RTFDC1-206ENST00000477485 MAN1C1Q9NR34 630 aa7.51□□□□□ -1.21
RTFDC1-206ENST00000477485 CHST12Q9NRB3 414 aa7.51□□□□□ -1.21
RTFDC1-206ENST00000477485 MRPL17Q9NRX2 175 aaKnown RBP7.51□□□□□ -1.21
RTFDC1-206ENST00000477485 BMP2KQ9NSY1 1161 aaPredicted RBP7.51□□□□□ -1.21
RTFDC1-206ENST00000477485 FAM105AQ9NUU6 356 aa7.51□□□□□ -1.21
RTFDC1-206ENST00000477485 SUCLA2Q9P2R7 463 aaPredicted RBP7.51□□□□□ -1.21
RTFDC1-206ENST00000477485 DUSP12Q9UNI6 340 aa7.51□□□□□ -1.21
RTFDC1-206ENST00000477485 USTQ9Y2C2 406 aa7.51□□□□□ -1.21
RTFDC1-206ENST00000477485 DOCK8Q8NF50 2099 aa7.51□□□□□ -1.21
RTFDC1-206ENST00000477485 RIF1Q5UIP0 2472 aaKnown RBP7.51□□□□□ -1.21
RTFDC1-206ENST00000477485 PATJQ8NI35 1801 aa7.5□□□□□ -1.21
RTFDC1-206ENST00000477485 CARNS1A5YM72 827 aa7.5□□□□□ -1.21
RTFDC1-206ENST00000477485 POMCP01189 267 aa7.5□□□□□ -1.21
RTFDC1-206ENST00000477485 GALTP07902 379 aa7.5□□□□□ -1.21
RTFDC1-206ENST00000477485 CNPP09543 421 aaKnown RBP7.5□□□□□ -1.21
RTFDC1-206ENST00000477485 CPA1P15085 419 aa7.5□□□□□ -1.21
RTFDC1-206ENST00000477485 RAB27AP51159 221 aa7.5□□□□□ -1.21
RTFDC1-206ENST00000477485 CLCN4P51793 760 aa7.5□□□□□ -1.21
RTFDC1-206ENST00000477485 NONOQ15233 471 aaKnown RBP eCLIP7.5□□□□□ -1.21
RTFDC1-206ENST00000477485 LETM2Q2VYF4 491 aa7.5□□□□□ -1.21
RTFDC1-206ENST00000477485 ADCK5Q3MIX3 580 aa7.5□□□□□ -1.21
RTFDC1-206ENST00000477485 PLA2G4FQ68DD2 849 aa7.5□□□□□ -1.21
RTFDC1-206ENST00000477485 ELMSAN1Q6PJG2 1045 aa7.5□□□□□ -1.21
RTFDC1-206ENST00000477485 Q6ZUG5 572 aa7.5□□□□□ -1.21
RTFDC1-206ENST00000477485 ERMP1Q7Z2K6 904 aa7.5□□□□□ -1.21
RTFDC1-206ENST00000477485 GPR149Q86SP6 731 aa7.5□□□□□ -1.21
RTFDC1-206ENST00000477485 ZNF280BQ86YH2 543 aa7.5□□□□□ -1.21
RTFDC1-206ENST00000477485 KIAA2013Q8IYS2 634 aa7.5□□□□□ -1.21
RTFDC1-206ENST00000477485 ST13P5Q8NFI4 369 aaPredicted RBP7.5□□□□□ -1.21
RTFDC1-206ENST00000477485 RSAD2Q8WXG1 361 aa7.5□□□□□ -1.21
RTFDC1-206ENST00000477485 KLHL5Q96PQ7 755 aa7.5□□□□□ -1.21
RTFDC1-206ENST00000477485 SLC26A6Q9BXS9 759 aa7.5□□□□□ -1.21
RTFDC1-206ENST00000477485 SLKQ9H2G2 1235 aaPredicted RBP7.5□□□□□ -1.21
RTFDC1-206ENST00000477485 RSAD1Q9HA92 442 aa7.5□□□□□ -1.21
RTFDC1-206ENST00000477485 VPS54Q9P1Q0 977 aa7.5□□□□□ -1.21
RTFDC1-206ENST00000477485 FAN1Q9Y2M0 1017 aa7.5□□□□□ -1.21
RTFDC1-206ENST00000477485 PRG3Q9Y2Y8 225 aaPredicted RBP7.5□□□□□ -1.21
RTFDC1-206ENST00000477485 PCDHB2Q9Y5E7 798 aa7.5□□□□□ -1.21
RTFDC1-206ENST00000477485 R4GN57 208 aa7.5□□□□□ -1.21
RTFDC1-206ENST00000477485 FANCMQ8IYD8 2048 aa7.5□□□□□ -1.21
RTFDC1-206ENST00000477485 DOCK6Q96HP0 2047 aa7.49□□□□□ -1.21
RTFDC1-206ENST00000477485 CCDC195A0A1B0GUA6 201 aa7.49□□□□□ -1.21
RTFDC1-206ENST00000477485 ESYT2A0FGR8 921 aa7.49□□□□□ -1.21
RTFDC1-206ENST00000477485 INPPL1O15357 1258 aa7.49□□□□□ -1.21
RTFDC1-206ENST00000477485 OFD1O75665 1012 aa7.49□□□□□ -1.21
RTFDC1-206ENST00000477485 ERLIN2O94905 339 aa7.49□□□□□ -1.21
RTFDC1-206ENST00000477485 GLUD1P00367 558 aa7.49□□□□□ -1.21
RTFDC1-206ENST00000477485 ALDH2P05091 517 aa7.49□□□□□ -1.21
RTFDC1-206ENST00000477485 ADH1AP07327 375 aa7.49□□□□□ -1.21
RTFDC1-206ENST00000477485 SPATA31D3P0C874 917 aa7.49□□□□□ -1.21
RTFDC1-206ENST00000477485 SRGAP2CP0DJJ0 459 aa7.49□□□□□ -1.21
RTFDC1-206ENST00000477485 NPR3P17342 541 aa7.49□□□□□ -1.21
RTFDC1-206ENST00000477485 OR1G1P47890 313 aa7.49□□□□□ -1.21
RTFDC1-206ENST00000477485 NLRP5P59047 1200 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms