RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 PSMC5P62195 406 aa11.86□□□□□ -0.51
COL27A1-204ENST00000477421 MICALL2Q8IY33 904 aa11.86□□□□□ -0.51
COL27A1-204ENST00000477421 CERKQ8TCT0 537 aa11.86□□□□□ -0.51
COL27A1-204ENST00000477421 NSUN6Q8TEA1 469 aaKnown RBP11.86□□□□□ -0.51
COL27A1-204ENST00000477421 RFFLQ8WZ73 363 aa11.86□□□□□ -0.51
COL27A1-204ENST00000477421 ATG4CQ96DT6 458 aa11.86□□□□□ -0.51
COL27A1-204ENST00000477421 THOC1Q96FV9 657 aaKnown RBP11.86□□□□□ -0.51
COL27A1-204ENST00000477421 FGFBP2Q9BYJ0 223 aa11.86□□□□□ -0.51
COL27A1-204ENST00000477421 UNC45AQ9H3U1 944 aa11.86□□□□□ -0.51
COL27A1-204ENST00000477421 COX16Q9P0S2 106 aa11.86□□□□□ -0.51
COL27A1-204ENST00000477421 EZRP15311 586 aaKnown RBP11.86□□□□□ -0.51
COL27A1-204ENST00000477421 MAGOHP61326 146 aaKnown RBP11.86□□□□□ -0.51
COL27A1-204ENST00000477421 MTM1Q13496 603 aa11.86□□□□□ -0.51
COL27A1-204ENST00000477421 PPP2R5EQ16537 467 aa11.86□□□□□ -0.51
COL27A1-204ENST00000477421 CDAN1Q8IWY9 1227 aa11.86□□□□□ -0.51
COL27A1-204ENST00000477421 RHOT2Q8IXI1 618 aa11.86□□□□□ -0.51
COL27A1-204ENST00000477421 NEK9Q8TD19 979 aa11.86□□□□□ -0.51
COL27A1-204ENST00000477421 ZKSCAN4Q969J2 545 aaPredicted RBP11.86□□□□□ -0.51
COL27A1-204ENST00000477421 TAF1DQ9H5J8 278 aaPredicted RBP11.86□□□□□ -0.51
COL27A1-204ENST00000477421 TUFT1Q9NNX1 390 aa11.86□□□□□ -0.51
COL27A1-204ENST00000477421 OSGEPQ9NPF4 335 aa11.86□□□□□ -0.51
COL27A1-204ENST00000477421 AGPAT3Q9NRZ7 376 aa11.86□□□□□ -0.51
COL27A1-204ENST00000477421 FAM198AQ9UFP1 575 aa11.86□□□□□ -0.51
COL27A1-204ENST00000477421 PARP2Q9UGN5 583 aa11.86□□□□□ -0.51
COL27A1-204ENST00000477421 MYO3BQ8WXR4 1341 aa11.86□□□□□ -0.51
COL27A1-204ENST00000477421 PITPNM2Q9BZ72 1349 aa11.86□□□□□ -0.51
COL27A1-204ENST00000477421 CCDC188H7C350 402 aa11.86□□□□□ -0.51
COL27A1-204ENST00000477421 FOXN3O00409 490 aaPredicted RBP11.86□□□□□ -0.51
COL27A1-204ENST00000477421 PPFIA4O75335 1185 aa11.86□□□□□ -0.51
COL27A1-204ENST00000477421 KCTD2Q14681 263 aa11.86□□□□□ -0.51
COL27A1-204ENST00000477421 NAB2Q15742 525 aa11.86□□□□□ -0.51
COL27A1-204ENST00000477421 Q3C1V9 767 aa11.86□□□□□ -0.51
COL27A1-204ENST00000477421 CCDC38Q502W7 563 aa11.86□□□□□ -0.51
COL27A1-204ENST00000477421 SEZ6Q53EL9 994 aa11.86□□□□□ -0.51
COL27A1-204ENST00000477421 ZNF571Q7Z3V5 609 aaPredicted RBP11.86□□□□□ -0.51
COL27A1-204ENST00000477421 VSIG1Q86XK7 387 aa11.86□□□□□ -0.51
COL27A1-204ENST00000477421 TRIM59Q8IWR1 403 aa11.86□□□□□ -0.51
COL27A1-204ENST00000477421 ZNF564Q8TBZ8 553 aaPredicted RBP11.86□□□□□ -0.51
COL27A1-204ENST00000477421 DCPSQ96C86 337 aaKnown RBP11.86□□□□□ -0.51
COL27A1-204ENST00000477421 POP1Q99575 1024 aaKnown RBP11.86□□□□□ -0.51
COL27A1-204ENST00000477421 ADAM22Q9P0K1 906 aa11.86□□□□□ -0.51
COL27A1-204ENST00000477421 PCDHA10Q9Y5I2 948 aa11.86□□□□□ -0.51
COL27A1-204ENST00000477421 PDE4DIPQ5VU43 2346 aa11.86□□□□□ -0.51
COL27A1-204ENST00000477421 A6NNZ2 444 aa11.86□□□□□ -0.51
COL27A1-204ENST00000477421 TISP43B9A030 160 aa11.86□□□□□ -0.51
COL27A1-204ENST00000477421 NR3C2P08235 984 aa11.86□□□□□ -0.51
COL27A1-204ENST00000477421 SREBF1P36956 1147 aa11.86□□□□□ -0.51
COL27A1-204ENST00000477421 RWDD2BP57060 319 aa11.86□□□□□ -0.51
COL27A1-204ENST00000477421 TUBB8Q3ZCM7 444 aa11.86□□□□□ -0.51
COL27A1-204ENST00000477421 KRT39Q6A163 491 aa11.86□□□□□ -0.51
COL27A1-204ENST00000477421 CASC4Q6P4E1 433 aa11.86□□□□□ -0.51
COL27A1-204ENST00000477421 CDR2LQ86X02 465 aaPredicted RBP11.86□□□□□ -0.51
COL27A1-204ENST00000477421 CCDC13Q8IYE1 715 aa11.86□□□□□ -0.51
COL27A1-204ENST00000477421 PLCD3Q8N3E9 789 aa11.86□□□□□ -0.51
COL27A1-204ENST00000477421 RSAD2Q8WXG1 361 aa11.86□□□□□ -0.51
COL27A1-204ENST00000477421 CALN1Q9BXU9 219 aa11.86□□□□□ -0.51
COL27A1-204ENST00000477421 STK38LQ9Y2H1 464 aa11.86□□□□□ -0.51
COL27A1-204ENST00000477421 SGK1O00141 431 aa11.85□□□□□ -0.51
COL27A1-204ENST00000477421 PPP1R11O60927 126 aaPredicted RBP11.85□□□□□ -0.51
COL27A1-204ENST00000477421 TNNC2P02585 160 aa11.85□□□□□ -0.51
COL27A1-204ENST00000477421 KRT76Q01546 638 aa11.85□□□□□ -0.51
COL27A1-204ENST00000477421 ZNF354CQ86Y25 554 aa11.85□□□□□ -0.51
COL27A1-204ENST00000477421 ZNF507Q8TCN5 953 aa11.85□□□□□ -0.51
COL27A1-204ENST00000477421 AGPAT1Q99943 283 aa11.85□□□□□ -0.51
COL27A1-204ENST00000477421 GLIS2Q9BZE0 524 aaPredicted RBP11.85□□□□□ -0.51
COL27A1-204ENST00000477421 KLHL11Q9NVR0 708 aa11.85□□□□□ -0.51
COL27A1-204ENST00000477421 CNOT7Q9UIV1 285 aaKnown RBP11.85□□□□□ -0.51
COL27A1-204ENST00000477421 AKT3Q9Y243 479 aa11.85□□□□□ -0.51
COL27A1-204ENST00000477421 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.85□□□□□ -0.51
COL27A1-204ENST00000477421 CLDN3O15551 220 aa11.85□□□□□ -0.51
COL27A1-204ENST00000477421 HOXA10P31260 410 aaPredicted RBP11.85□□□□□ -0.51
COL27A1-204ENST00000477421 BPIFB4P59827 614 aa11.85□□□□□ -0.51
COL27A1-204ENST00000477421 MXRA7P84157 204 aa11.85□□□□□ -0.51
COL27A1-204ENST00000477421 GLE1Q53GS7 698 aaKnown RBP11.85□□□□□ -0.51
COL27A1-204ENST00000477421 MIIPQ5JXC2 388 aa11.85□□□□□ -0.51
COL27A1-204ENST00000477421 DACT2Q5SW24 774 aa11.85□□□□□ -0.51
COL27A1-204ENST00000477421 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.85□□□□□ -0.51
COL27A1-204ENST00000477421 C7orf31Q8N865 590 aa11.85□□□□□ -0.51
COL27A1-204ENST00000477421 MXRA8Q9BRK3 442 aa11.85□□□□□ -0.51
COL27A1-204ENST00000477421 STK33Q9BYT3 514 aa11.85□□□□□ -0.51
COL27A1-204ENST00000477421 HOMER3Q9NSC5 361 aa11.85□□□□□ -0.51
COL27A1-204ENST00000477421 REXO2Q9Y3B8 237 aaKnown RBP11.85□□□□□ -0.51
COL27A1-204ENST00000477421 CHD2O14647 1828 aaKnown RBP11.85□□□□□ -0.51
COL27A1-204ENST00000477421 GAKO14976 1311 aa11.85□□□□□ -0.51
COL27A1-204ENST00000477421 SLC35G1Q2M3R5 365 aa11.85□□□□□ -0.51
COL27A1-204ENST00000477421 HHATQ5VTY9 493 aa11.85□□□□□ -0.51
COL27A1-204ENST00000477421 PAPD7Q5XG87 772 aaKnown RBP11.85□□□□□ -0.51
COL27A1-204ENST00000477421 GDAP1Q8TB36 358 aa11.85□□□□□ -0.51
COL27A1-204ENST00000477421 CPA5Q8WXQ8 436 aa11.85□□□□□ -0.51
COL27A1-204ENST00000477421 CDHR1Q96JP9 859 aa11.85□□□□□ -0.51
COL27A1-204ENST00000477421 THAP2Q9H0W7 228 aa11.85□□□□□ -0.51
COL27A1-204ENST00000477421 TTLL3Q9Y4R7 772 aa11.85□□□□□ -0.51
COL27A1-204ENST00000477421 KCPQ6ZWJ8 1503 aa11.84□□□□□ -0.51
COL27A1-204ENST00000477421 TARSL2A2RTX5 802 aaKnown RBP11.84□□□□□ -0.51
COL27A1-204ENST00000477421 SPDYE2BA6NHP3 402 aa11.84□□□□□ -0.51
COL27A1-204ENST00000477421 RASGRF2O14827 1237 aa11.84□□□□□ -0.51
COL27A1-204ENST00000477421 STAM2O75886 525 aa11.84□□□□□ -0.51
COL27A1-204ENST00000477421 SPDYE6P0CI01 402 aa11.84□□□□□ -0.51
COL27A1-204ENST00000477421 JAK3P52333 1124 aa11.84□□□□□ -0.51
COL27A1-204ENST00000477421 PPP2R5AQ15172 486 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 208.4 ms