RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 ACVR2BQ13705 512 aa16.45■□□□□ 0.22
CLSTN1-205ENST00000477264 FAM47AQ5JRC9 791 aa16.45■□□□□ 0.22
CLSTN1-205ENST00000477264 DYDC1Q8WWB3 177 aa16.45■□□□□ 0.22
CLSTN1-205ENST00000477264 GRAMD1AQ96CP6 724 aa16.45■□□□□ 0.22
CLSTN1-205ENST00000477264 SGIP1Q9BQI5 828 aa16.45■□□□□ 0.22
CLSTN1-205ENST00000477264 MXD3Q9BW11 206 aa16.45■□□□□ 0.22
CLSTN1-205ENST00000477264 SPZ1Q9BXG8 430 aa16.45■□□□□ 0.22
CLSTN1-205ENST00000477264 LRRC4CQ9HCJ2 640 aa16.45■□□□□ 0.22
CLSTN1-205ENST00000477264 KCNQ5Q9NR82 932 aa16.45■□□□□ 0.22
CLSTN1-205ENST00000477264 GAKO14976 1311 aa16.45■□□□□ 0.22
CLSTN1-205ENST00000477264 ESYT2A0FGR8 921 aa16.45■□□□□ 0.22
CLSTN1-205ENST00000477264 TLDC2A0PJX2 215 aa16.45■□□□□ 0.22
CLSTN1-205ENST00000477264 RASGRF2O14827 1237 aa16.45■□□□□ 0.22
CLSTN1-205ENST00000477264 ABL2P42684 1182 aa16.45■□□□□ 0.22
CLSTN1-205ENST00000477264 CTCFP49711 727 aaPredicted RBP16.45■□□□□ 0.22
CLSTN1-205ENST00000477264 PAPOLAP51003 745 aaKnown RBP16.45■□□□□ 0.22
CLSTN1-205ENST00000477264 RPS6KA3P51812 740 aa16.45■□□□□ 0.22
CLSTN1-205ENST00000477264 NAPAP54920 295 aa16.45■□□□□ 0.22
CLSTN1-205ENST00000477264 MAPK7Q13164 816 aa16.45■□□□□ 0.22
CLSTN1-205ENST00000477264 KRT79Q5XKE5 535 aa16.45■□□□□ 0.22
CLSTN1-205ENST00000477264 APBB1IPQ7Z5R6 666 aaPredicted RBP16.45■□□□□ 0.22
CLSTN1-205ENST00000477264 JAMLQ86YT9 394 aa16.45■□□□□ 0.22
CLSTN1-205ENST00000477264 LARGE2Q8N3Y3 721 aa16.45■□□□□ 0.22
CLSTN1-205ENST00000477264 TGFBRAP1Q8WUH2 860 aa16.45■□□□□ 0.22
CLSTN1-205ENST00000477264 PRCCQ92733 491 aaPredicted RBP16.45■□□□□ 0.22
CLSTN1-205ENST00000477264 FAM210AQ96ND0 272 aa16.45■□□□□ 0.22
CLSTN1-205ENST00000477264 MTMR9Q96QG7 549 aa16.45■□□□□ 0.22
CLSTN1-205ENST00000477264 TAOK3Q9H2K8 898 aa16.45■□□□□ 0.22
CLSTN1-205ENST00000477264 RPL26L1Q9UNX3 145 aaKnown RBP16.45■□□□□ 0.22
CLSTN1-205ENST00000477264 RPTORQ8N122 1335 aa16.45■□□□□ 0.22
CLSTN1-205ENST00000477264 ROBO3Q96MS0 1386 aa16.45■□□□□ 0.22
CLSTN1-205ENST00000477264 PODXLO00592 558 aa16.44■□□□□ 0.22
CLSTN1-205ENST00000477264 KIAA0391O15091 583 aaKnown RBP16.44■□□□□ 0.22
CLSTN1-205ENST00000477264 SLC26A4O43511 780 aa16.44■□□□□ 0.22
CLSTN1-205ENST00000477264 CNGA1P29973 690 aa16.44■□□□□ 0.22
CLSTN1-205ENST00000477264 CALCRLQ16602 461 aa16.44■□□□□ 0.22
CLSTN1-205ENST00000477264 ZDHHC24Q6UX98 284 aa16.44■□□□□ 0.22
CLSTN1-205ENST00000477264 SPICE1Q8N0Z3 855 aa16.44■□□□□ 0.22
CLSTN1-205ENST00000477264 TEKT1Q969V4 418 aa16.44■□□□□ 0.22
CLSTN1-205ENST00000477264 VPS33BQ9H267 617 aa16.44■□□□□ 0.22
CLSTN1-205ENST00000477264 GOLPH3Q9H4A6 298 aa16.44■□□□□ 0.22
CLSTN1-205ENST00000477264 RNPEPL1Q9HAU8 725 aa16.44■□□□□ 0.22
CLSTN1-205ENST00000477264 DAGLAQ9Y4D2 1042 aa16.44■□□□□ 0.22
CLSTN1-205ENST00000477264 SCN9AQ15858 1988 aa16.44■□□□□ 0.22
CLSTN1-205ENST00000477264 NAV1Q8NEY1 1877 aa16.44■□□□□ 0.22
CLSTN1-205ENST00000477264 SYNGAP1Q96PV0 1343 aa16.44■□□□□ 0.22
CLSTN1-205ENST00000477264 POTEFA5A3E0 1075 aa16.44■□□□□ 0.22
CLSTN1-205ENST00000477264 hCG_1984214I3L0E3 225 aa16.44■□□□□ 0.22
CLSTN1-205ENST00000477264 POTEIP0CG38 1075 aa16.44■□□□□ 0.22
CLSTN1-205ENST00000477264 POTEJP0CG39 1038 aa16.44■□□□□ 0.22
CLSTN1-205ENST00000477264 UCHL3P15374 230 aa16.44■□□□□ 0.22
CLSTN1-205ENST00000477264 CHRNA3P32297 505 aa16.44■□□□□ 0.22
CLSTN1-205ENST00000477264 IFI35P80217 286 aaPredicted RBP16.44■□□□□ 0.22
CLSTN1-205ENST00000477264 SLC29A2Q14542 456 aa16.44■□□□□ 0.22
CLSTN1-205ENST00000477264 PLS1Q14651 629 aa16.44■□□□□ 0.22
CLSTN1-205ENST00000477264 DACT2Q5SW24 774 aa16.44■□□□□ 0.22
CLSTN1-205ENST00000477264 POTEEQ6S8J3 1075 aa16.44■□□□□ 0.22
CLSTN1-205ENST00000477264 CCDC65Q8IXS2 484 aa16.44■□□□□ 0.22
CLSTN1-205ENST00000477264 AGGF1Q8N302 714 aaeCLIP16.44■□□□□ 0.22
CLSTN1-205ENST00000477264 ZNF713Q8N859 430 aaPredicted RBP16.44■□□□□ 0.22
CLSTN1-205ENST00000477264 RFFLQ8WZ73 363 aa16.44■□□□□ 0.22
CLSTN1-205ENST00000477264 TRIM31Q9BZY9 425 aa16.44■□□□□ 0.22
CLSTN1-205ENST00000477264 BMP2KQ9NSY1 1161 aaPredicted RBP16.44■□□□□ 0.22
CLSTN1-205ENST00000477264 PRKAG3Q9UGI9 489 aa16.44■□□□□ 0.22
CLSTN1-205ENST00000477264 BRCA1P38398 1863 aaKnown RBP16.44■□□□□ 0.22
CLSTN1-205ENST00000477264 KDM3AQ9Y4C1 1321 aa16.43■□□□□ 0.22
CLSTN1-205ENST00000477264 CETN3O15182 167 aa16.43■□□□□ 0.22
CLSTN1-205ENST00000477264 DDX3YO15523 660 aaKnown RBP16.43■□□□□ 0.22
CLSTN1-205ENST00000477264 PHF2O75151 1096 aa16.43■□□□□ 0.22
CLSTN1-205ENST00000477264 GGPS1O95749 300 aa16.43■□□□□ 0.22
CLSTN1-205ENST00000477264 GNAZP19086 355 aa16.43■□□□□ 0.22
CLSTN1-205ENST00000477264 ATP6V1C1P21283 382 aa16.43■□□□□ 0.22
CLSTN1-205ENST00000477264 PTGER2P43116 358 aa16.43■□□□□ 0.22
CLSTN1-205ENST00000477264 IFNAR2P48551 515 aa16.43■□□□□ 0.22
CLSTN1-205ENST00000477264 SCNN1DP51172 638 aa16.43■□□□□ 0.22
CLSTN1-205ENST00000477264 KCNH2Q12809 1159 aa16.43■□□□□ 0.22
CLSTN1-205ENST00000477264 AUHQ13825 339 aaKnown RBP16.43■□□□□ 0.22
CLSTN1-205ENST00000477264 SLC5A9Q2M3M2 681 aa16.43■□□□□ 0.22
CLSTN1-205ENST00000477264 TSNAXIP1Q2TAA8 658 aa16.43■□□□□ 0.22
CLSTN1-205ENST00000477264 SNX29Q8TEQ0 813 aa16.43■□□□□ 0.22
CLSTN1-205ENST00000477264 DNAJC19Q96DA6 116 aa16.43■□□□□ 0.22
CLSTN1-205ENST00000477264 PAPOLBQ9NRJ5 636 aaKnown RBP16.43■□□□□ 0.22
CLSTN1-205ENST00000477264 ZNF277Q9NRM2 450 aaPredicted RBP16.43■□□□□ 0.22
CLSTN1-205ENST00000477264 USP40Q9NVE5 1235 aa16.43■□□□□ 0.22
CLSTN1-205ENST00000477264 CDK5RAP2Q96SN8 1893 aa16.43■□□□□ 0.22
CLSTN1-205ENST00000477264 UNC5CO95185 931 aa16.43■□□□□ 0.22
CLSTN1-205ENST00000477264 RARGP13631 454 aa16.43■□□□□ 0.22
CLSTN1-205ENST00000477264 ACADSP16219 412 aa16.43■□□□□ 0.22
CLSTN1-205ENST00000477264 LRRC41Q15345 812 aa16.43■□□□□ 0.22
CLSTN1-205ENST00000477264 ENOX2Q16206 610 aaKnown RBP16.43■□□□□ 0.22
CLSTN1-205ENST00000477264 HHIPL2Q6UWX4 724 aa16.43■□□□□ 0.22
CLSTN1-205ENST00000477264 TRMT10CQ7L0Y3 403 aaKnown RBP16.43■□□□□ 0.22
CLSTN1-205ENST00000477264 FRMD5Q7Z6J6 570 aa16.43■□□□□ 0.22
CLSTN1-205ENST00000477264 KIAA0825Q8IV33 1275 aa16.43■□□□□ 0.22
CLSTN1-205ENST00000477264 FGFR1OP2Q9NVK5 253 aa16.43■□□□□ 0.22
CLSTN1-205ENST00000477264 KLHL14Q9P2G3 628 aa16.43■□□□□ 0.22
CLSTN1-205ENST00000477264 STK38LQ9Y2H1 464 aa16.43■□□□□ 0.22
CLSTN1-205ENST00000477264 PALM3A6NDB9 673 aaPredicted RBP16.42■□□□□ 0.22
CLSTN1-205ENST00000477264 TCP11X1B4DZS4 312 aa16.42■□□□□ 0.22
CLSTN1-205ENST00000477264 RIPK2O43353 540 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms