RNA–Protein interactions for RNA: ENST00000476641.2

CHD6-207, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-207ENST00000476641 SLC43A3Q8NBI5 491 aa9.13□□□□□ -0.95
CHD6-207ENST00000476641 NSUN6Q8TEA1 469 aaKnown RBP9.13□□□□□ -0.95
CHD6-207ENST00000476641 AFG1LQ8WV93 481 aa9.13□□□□□ -0.95
CHD6-207ENST00000476641 FAM161BQ96MY7 647 aa9.13□□□□□ -0.95
CHD6-207ENST00000476641 BCAS3Q9H6U6 928 aa9.13□□□□□ -0.95
CHD6-207ENST00000476641 TRMT13Q9NUP7 481 aaKnown RBP9.13□□□□□ -0.95
CHD6-207ENST00000476641 DZANK1Q9NVP4 752 aa9.13□□□□□ -0.95
CHD6-207ENST00000476641 PNMA2Q9UL42 364 aa9.13□□□□□ -0.95
CHD6-207ENST00000476641 BRPF3Q9ULD4 1205 aa9.13□□□□□ -0.95
CHD6-207ENST00000476641 TELO2Q9Y4R8 837 aa9.13□□□□□ -0.95
CHD6-207ENST00000476641 PNMA6FA0A0J9YX94 578 aa9.12□□□□□ -0.95
CHD6-207ENST00000476641 DCDC2CA8MYV0 355 aa9.12□□□□□ -0.95
CHD6-207ENST00000476641 DDAH1O94760 285 aa9.12□□□□□ -0.95
CHD6-207ENST00000476641 CD4P01730 458 aa9.12□□□□□ -0.95
CHD6-207ENST00000476641 CYP2C9P11712 490 aa9.12□□□□□ -0.95
CHD6-207ENST00000476641 CSF2RAP15509 400 aa9.12□□□□□ -0.95
CHD6-207ENST00000476641 CES1P23141 567 aa9.12□□□□□ -0.95
CHD6-207ENST00000476641 CCL23P55773 120 aa9.12□□□□□ -0.95
CHD6-207ENST00000476641 ARHGAP1Q07960 439 aa9.12□□□□□ -0.95
CHD6-207ENST00000476641 ELOAQ14241 798 aaKnown RBP9.12□□□□□ -0.95
CHD6-207ENST00000476641 CPSF6Q16630 551 aaKnown RBP eCLIP9.12□□□□□ -0.95
CHD6-207ENST00000476641 USP17L6PQ6QN14 398 aa9.12□□□□□ -0.95
CHD6-207ENST00000476641 VSIG10LQ86VR7 867 aa9.12□□□□□ -0.95
CHD6-207ENST00000476641 MCF2L2Q86YR7 1114 aa9.12□□□□□ -0.95
CHD6-207ENST00000476641 SCFD2Q8WU76 684 aa9.12□□□□□ -0.95
CHD6-207ENST00000476641 TOX2Q96NM4 488 aa9.12□□□□□ -0.95
CHD6-207ENST00000476641 HHIPQ96QV1 700 aa9.12□□□□□ -0.95
CHD6-207ENST00000476641 PDCD2LQ9BRP1 358 aa9.12□□□□□ -0.95
CHD6-207ENST00000476641 SOX13Q9UN79 622 aa9.12□□□□□ -0.95
CHD6-207ENST00000476641 Q9Y3F1 56 aa9.12□□□□□ -0.95
CHD6-207ENST00000476641 CHD9Q3L8U1 2897 aa9.11□□□□□ -0.95
CHD6-207ENST00000476641 CCDC69A6NI79 296 aa9.11□□□□□ -0.95
CHD6-207ENST00000476641 GCOM1H8Y6P7 765 aaPredicted RBP9.11□□□□□ -0.95
CHD6-207ENST00000476641 TIMP1P01033 207 aa9.11□□□□□ -0.95
CHD6-207ENST00000476641 PRNPP04156 253 aa9.11□□□□□ -0.95
CHD6-207ENST00000476641 MMP3P08254 477 aa9.11□□□□□ -0.95
CHD6-207ENST00000476641 POLR2MP0CAP2 368 aa9.11□□□□□ -0.95
CHD6-207ENST00000476641 EXOSC10Q01780 885 aaKnown RBP9.11□□□□□ -0.95
CHD6-207ENST00000476641 SP2Q02086 613 aa9.11□□□□□ -0.95
CHD6-207ENST00000476641 GHRHRQ02643 423 aa9.11□□□□□ -0.95
CHD6-207ENST00000476641 FPGSQ05932 587 aa9.11□□□□□ -0.95
CHD6-207ENST00000476641 TTLL4Q14679 1199 aa9.11□□□□□ -0.95
CHD6-207ENST00000476641 PGM5Q15124 567 aa9.11□□□□□ -0.95
CHD6-207ENST00000476641 UBE2SQ16763 222 aa9.11□□□□□ -0.95
CHD6-207ENST00000476641 FAM47CQ5HY64 1035 aa9.11□□□□□ -0.95
CHD6-207ENST00000476641 TMTC3Q6ZXV5 915 aa9.11□□□□□ -0.95
CHD6-207ENST00000476641 CBLL1Q75N03 491 aa9.11□□□□□ -0.95
CHD6-207ENST00000476641 TP53INP2Q8IXH6 220 aa9.11□□□□□ -0.95
CHD6-207ENST00000476641 SHISA5Q8N114 240 aa9.11□□□□□ -0.95
CHD6-207ENST00000476641 DEFB123Q8N688 67 aa9.11□□□□□ -0.95
CHD6-207ENST00000476641 CTCFLQ8NI51 663 aaPredicted RBP9.11□□□□□ -0.95
CHD6-207ENST00000476641 VWCEQ96DN2 955 aa9.11□□□□□ -0.95
CHD6-207ENST00000476641 TMEM87BQ96K49 555 aa9.11□□□□□ -0.95
CHD6-207ENST00000476641 RNPC3Q96LT9 517 aaKnown RBP9.11□□□□□ -0.95
CHD6-207ENST00000476641 FBXL18Q96ME1 805 aa9.11□□□□□ -0.95
CHD6-207ENST00000476641 NEK1Q96PY6 1258 aa9.11□□□□□ -0.95
CHD6-207ENST00000476641 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.11□□□□□ -0.95
CHD6-207ENST00000476641 SPZ1Q9BXG8 430 aa9.11□□□□□ -0.95
CHD6-207ENST00000476641 USP26Q9BXU7 913 aa9.11□□□□□ -0.95
CHD6-207ENST00000476641 WNT8AQ9H1J5 351 aa9.11□□□□□ -0.95
CHD6-207ENST00000476641 ALDH8A1Q9H2A2 487 aaPredicted RBP9.11□□□□□ -0.95
CHD6-207ENST00000476641 DDX41Q9UJV9 622 aaKnown RBP9.11□□□□□ -0.95
CHD6-207ENST00000476641 SLC12A7Q9Y666 1083 aa9.11□□□□□ -0.95
CHD6-207ENST00000476641 CUL9Q8IWT3 2517 aa9.11□□□□□ -0.95
CHD6-207ENST00000476641 EYSQ5T1H1 3165 aa9.1□□□□□ -0.95
CHD6-207ENST00000476641 PRUNE2Q8WUY3 3088 aa9.1□□□□□ -0.95
CHD6-207ENST00000476641 LOC102724159A0A0B4J2E5 919 aa9.1□□□□□ -0.95
CHD6-207ENST00000476641 FAM95CA0A1B0GW59 222 aa9.1□□□□□ -0.95
CHD6-207ENST00000476641 GRXCR1A8MXD5 290 aa9.1□□□□□ -0.95
CHD6-207ENST00000476641 ZEB2O60315 1214 aa9.1□□□□□ -0.95
CHD6-207ENST00000476641 CABYRO75952 493 aa9.1□□□□□ -0.95
CHD6-207ENST00000476641 ZNF286BP0CG31 522 aa9.1□□□□□ -0.95
CHD6-207ENST00000476641 LIFRP42702 1097 aa9.1□□□□□ -0.95
CHD6-207ENST00000476641 CPT1AP50416 773 aa9.1□□□□□ -0.95
CHD6-207ENST00000476641 MRPS9P82933 396 aaKnown RBP9.1□□□□□ -0.95
CHD6-207ENST00000476641 PWP2Q15269 919 aaKnown RBP9.1□□□□□ -0.95
CHD6-207ENST00000476641 NFKBIBQ15653 356 aa9.1□□□□□ -0.95
CHD6-207ENST00000476641 STXBP2Q15833 593 aa9.1□□□□□ -0.95
CHD6-207ENST00000476641 MFSD5Q6N075 450 aa9.1□□□□□ -0.95
CHD6-207ENST00000476641 APOA5Q6Q788 366 aa9.1□□□□□ -0.95
CHD6-207ENST00000476641 PAOXQ6QHF9 649 aa9.1□□□□□ -0.95
CHD6-207ENST00000476641 C1orf127Q8N9H9 656 aa9.1□□□□□ -0.95
CHD6-207ENST00000476641 KAT2BQ92831 832 aa9.1□□□□□ -0.95
CHD6-207ENST00000476641 RRP36Q96EU6 259 aaKnown RBP9.1□□□□□ -0.95
CHD6-207ENST00000476641 ASIC4Q96FT7 647 aa9.1□□□□□ -0.95
CHD6-207ENST00000476641 SCLYQ96I15 445 aa9.1□□□□□ -0.95
CHD6-207ENST00000476641 CTAGE1Q96RT6 745 aa9.1□□□□□ -0.95
CHD6-207ENST00000476641 IWS1Q96ST2 819 aa9.1□□□□□ -0.95
CHD6-207ENST00000476641 MTG1Q9BT17 334 aaPredicted RBP9.1□□□□□ -0.95
CHD6-207ENST00000476641 NOC4LQ9BVI4 516 aaKnown RBP9.1□□□□□ -0.95
CHD6-207ENST00000476641 TMPRSS13Q9BYE2 586 aa9.1□□□□□ -0.95
CHD6-207ENST00000476641 HIPK3Q9H422 1215 aa9.1□□□□□ -0.95
CHD6-207ENST00000476641 RTEL1Q9NZ71 1219 aa9.1□□□□□ -0.95
CHD6-207ENST00000476641 SNX14Q9Y5W7 946 aa9.1□□□□□ -0.95
CHD6-207ENST00000476641 MRVI1Q9Y6F6 885 aa9.1□□□□□ -0.95
CHD6-207ENST00000476641 KLF18A0A0U1RQI7 1052 aa9.09□□□□□ -0.95
CHD6-207ENST00000476641 MEIS2O14770 477 aa9.09□□□□□ -0.95
CHD6-207ENST00000476641 ADAMTS3O15072 1205 aa9.09□□□□□ -0.95
CHD6-207ENST00000476641 TLR3O15455 904 aaKnown RBP9.09□□□□□ -0.95
CHD6-207ENST00000476641 EIF3JO75822 258 aaKnown RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms