RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 FUBP3Q96I24 572 aaKnown RBP eCLIP6.66□□□□□ -1.34
PTCD3-211ENST00000476215 RAX2Q96IS3 184 aa6.66□□□□□ -1.34
PTCD3-211ENST00000476215 FAXDC2Q96IV6 333 aa6.66□□□□□ -1.34
PTCD3-211ENST00000476215 ORAI2Q96SN7 254 aa6.66□□□□□ -1.34
PTCD3-211ENST00000476215 POLR3BQ9NW08 1133 aaPredicted RBP6.66□□□□□ -1.34
PTCD3-211ENST00000476215 PRSS50Q9UI38 385 aa6.66□□□□□ -1.34
PTCD3-211ENST00000476215 DNAI1Q9UI46 699 aa6.66□□□□□ -1.34
PTCD3-211ENST00000476215 ZNF536O15090 1300 aa6.66□□□□□ -1.34
PTCD3-211ENST00000476215 TNKSO95271 1327 aa6.66□□□□□ -1.34
PTCD3-211ENST00000476215 B4GALT4O60513 344 aa6.65□□□□□ -1.34
PTCD3-211ENST00000476215 S100BP04271 92 aaPredicted RBP6.65□□□□□ -1.34
PTCD3-211ENST00000476215 MEOX1P50221 254 aa6.65□□□□□ -1.34
PTCD3-211ENST00000476215 RRADP55042 308 aa6.65□□□□□ -1.34
PTCD3-211ENST00000476215 SPIDRQ14159 915 aa6.65□□□□□ -1.34
PTCD3-211ENST00000476215 ODR4Q5SWX8 454 aa6.65□□□□□ -1.34
PTCD3-211ENST00000476215 GPR155Q7Z3F1 870 aa6.65□□□□□ -1.34
PTCD3-211ENST00000476215 CIR1Q86X95 450 aaPredicted RBP6.65□□□□□ -1.34
PTCD3-211ENST00000476215 LYSMD2Q8IV50 215 aa6.65□□□□□ -1.34
PTCD3-211ENST00000476215 OR14C36Q8NHC7 312 aa6.65□□□□□ -1.34
PTCD3-211ENST00000476215 RSAD2Q8WXG1 361 aa6.65□□□□□ -1.34
PTCD3-211ENST00000476215 LOXL4Q96JB6 756 aa6.65□□□□□ -1.34
PTCD3-211ENST00000476215 C8orf49Q96NF6 230 aa6.65□□□□□ -1.34
PTCD3-211ENST00000476215 CARD11Q9BXL7 1154 aa6.65□□□□□ -1.34
PTCD3-211ENST00000476215 MSL2Q9HCI7 577 aa6.65□□□□□ -1.34
PTCD3-211ENST00000476215 DPP7Q9UHL4 492 aa6.65□□□□□ -1.34
PTCD3-211ENST00000476215 NPEPPSL1A6NEC2 478 aa6.64□□□□□ -1.35
PTCD3-211ENST00000476215 MTHFD2P13995 350 aa6.64□□□□□ -1.35
PTCD3-211ENST00000476215 HSP90B1P14625 803 aaKnown RBP6.64□□□□□ -1.35
PTCD3-211ENST00000476215 XPAP23025 273 aaPredicted RBP6.64□□□□□ -1.35
PTCD3-211ENST00000476215 CCND1P24385 295 aa6.64□□□□□ -1.35
PTCD3-211ENST00000476215 NEK2P51955 445 aa6.64□□□□□ -1.35
PTCD3-211ENST00000476215 MRPS9P82933 396 aaKnown RBP6.64□□□□□ -1.35
PTCD3-211ENST00000476215 CDK17Q00537 523 aa6.64□□□□□ -1.35
PTCD3-211ENST00000476215 NFYCQ13952 458 aa6.64□□□□□ -1.35
PTCD3-211ENST00000476215 ICAM4Q14773 271 aa6.64□□□□□ -1.35
PTCD3-211ENST00000476215 PCBP2Q15366 365 aaKnown RBP eCLIP6.64□□□□□ -1.35
PTCD3-211ENST00000476215 CDSNQ15517 529 aa6.64□□□□□ -1.35
PTCD3-211ENST00000476215 ZXDCQ2QGD7 858 aaPredicted RBP6.64□□□□□ -1.35
PTCD3-211ENST00000476215 LARP4Q71RC2 724 aaKnown RBP eCLIP6.64□□□□□ -1.35
PTCD3-211ENST00000476215 ZBTB46Q86UZ6 589 aa6.64□□□□□ -1.35
PTCD3-211ENST00000476215 PNMA8AQ86V59 439 aaPredicted RBP6.64□□□□□ -1.35
PTCD3-211ENST00000476215 AUTS2Q8WXX7 1259 aa6.64□□□□□ -1.35
PTCD3-211ENST00000476215 DVL3Q92997 716 aaPredicted RBP6.64□□□□□ -1.35
PTCD3-211ENST00000476215 WDR92Q96MX6 357 aa6.64□□□□□ -1.35
PTCD3-211ENST00000476215 HAPLN2Q9GZV7 340 aa6.64□□□□□ -1.35
PTCD3-211ENST00000476215 FAM184BQ9ULE4 1060 aa6.64□□□□□ -1.35
PTCD3-211ENST00000476215 PTPN22Q9Y2R2 807 aa6.64□□□□□ -1.35
PTCD3-211ENST00000476215 SPEF1Q9Y4P9 236 aa6.64□□□□□ -1.35
PTCD3-211ENST00000476215 MRFAP1Q9Y605 127 aa6.64□□□□□ -1.35
PTCD3-211ENST00000476215 TRIM75PA6NK02 468 aa6.63□□□□□ -1.35
PTCD3-211ENST00000476215 XPOTO43592 962 aaKnown RBP6.63□□□□□ -1.35
PTCD3-211ENST00000476215 ZNF888P0CJ79 500 aaPredicted RBP6.63□□□□□ -1.35
PTCD3-211ENST00000476215 OSMP13725 252 aa6.63□□□□□ -1.35
PTCD3-211ENST00000476215 GPR15P49685 360 aa6.63□□□□□ -1.35
PTCD3-211ENST00000476215 ACAP2Q15057 778 aa6.63□□□□□ -1.35
PTCD3-211ENST00000476215 PCOLCEQ15113 449 aa6.63□□□□□ -1.35
PTCD3-211ENST00000476215 TTF1Q15361 905 aaPredicted RBP6.63□□□□□ -1.35
PTCD3-211ENST00000476215 TRIM68Q6AZZ1 485 aa6.63□□□□□ -1.35
PTCD3-211ENST00000476215 SLC41A1Q8IVJ1 513 aa6.63□□□□□ -1.35
PTCD3-211ENST00000476215 CHMP4CQ96CF2 233 aa6.63□□□□□ -1.35
PTCD3-211ENST00000476215 WWC2-AS2Q96NR7 200 aa6.63□□□□□ -1.35
PTCD3-211ENST00000476215 PTPN18Q99952 460 aa6.63□□□□□ -1.35
PTCD3-211ENST00000476215 KIAA1683Q9H0B3 1180 aa6.63□□□□□ -1.35
PTCD3-211ENST00000476215 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.63□□□□□ -1.35
PTCD3-211ENST00000476215 EVLQ9UI08 416 aaPredicted RBP6.63□□□□□ -1.35
PTCD3-211ENST00000476215 CDY2AQ9Y6F7 541 aa6.63□□□□□ -1.35
PTCD3-211ENST00000476215 A0A0A6YYK5 440 aaPredicted RBP6.62□□□□□ -1.35
PTCD3-211ENST00000476215 NRP2O60462 931 aa6.62□□□□□ -1.35
PTCD3-211ENST00000476215 RBP3P10745 1247 aa6.62□□□□□ -1.35
PTCD3-211ENST00000476215 HNRNPLP14866 589 aaKnown RBP eCLIP6.62□□□□□ -1.35
PTCD3-211ENST00000476215 MRE11P49959 708 aa6.62□□□□□ -1.35
PTCD3-211ENST00000476215 NRG3P56975 720 aa6.62□□□□□ -1.35
PTCD3-211ENST00000476215 CCT2P78371 535 aaKnown RBP6.62□□□□□ -1.35
PTCD3-211ENST00000476215 ADAM15Q13444 863 aa6.62□□□□□ -1.35
PTCD3-211ENST00000476215 R3HDM1Q15032 1099 aaKnown RBP6.62□□□□□ -1.35
PTCD3-211ENST00000476215 CCDC178Q5BJE1 867 aa6.62□□□□□ -1.35
PTCD3-211ENST00000476215 KLHDC10Q6PID8 442 aa6.62□□□□□ -1.35
PTCD3-211ENST00000476215 GAREM2Q75VX8 874 aa6.62□□□□□ -1.35
PTCD3-211ENST00000476215 KCNK18Q7Z418 384 aa6.62□□□□□ -1.35
PTCD3-211ENST00000476215 SOX7Q9BT81 388 aa6.62□□□□□ -1.35
PTCD3-211ENST00000476215 AASDHPPTQ9NRN7 309 aa6.62□□□□□ -1.35
PTCD3-211ENST00000476215 VWA7Q9Y334 891 aa6.62□□□□□ -1.35
PTCD3-211ENST00000476215 TSC22D4Q9Y3Q8 395 aa6.62□□□□□ -1.35
PTCD3-211ENST00000476215 GPR45Q9Y5Y3 372 aa6.62□□□□□ -1.35
PTCD3-211ENST00000476215 KLHL33A6NCF5 533 aa6.61□□□□□ -1.35
PTCD3-211ENST00000476215 FZD9O00144 591 aa6.61□□□□□ -1.35
PTCD3-211ENST00000476215 HMGB1P09429 215 aaKnown RBP6.61□□□□□ -1.35
PTCD3-211ENST00000476215 MTNR1BP49286 362 aa6.61□□□□□ -1.35
PTCD3-211ENST00000476215 SLC5A3P53794 718 aa6.61□□□□□ -1.35
PTCD3-211ENST00000476215 SESN2P58004 480 aaPredicted RBP6.61□□□□□ -1.35
PTCD3-211ENST00000476215 MAN2A1Q16706 1144 aa6.61□□□□□ -1.35
PTCD3-211ENST00000476215 MUM1Q2TAK8 710 aa6.61□□□□□ -1.35
PTCD3-211ENST00000476215 ZMAT1Q5H9K5 638 aa6.61□□□□□ -1.35
PTCD3-211ENST00000476215 LMBR1LQ6UX01 489 aa6.61□□□□□ -1.35
PTCD3-211ENST00000476215 GLB1L2Q8IW92 636 aa6.61□□□□□ -1.35
PTCD3-211ENST00000476215 TSPEARQ8WU66 669 aa6.61□□□□□ -1.35
PTCD3-211ENST00000476215 NKD2Q969F2 451 aaPredicted RBP6.61□□□□□ -1.35
PTCD3-211ENST00000476215 GFM2Q969S9 779 aaKnown RBP6.61□□□□□ -1.35
PTCD3-211ENST00000476215 GPR20Q99678 358 aa6.61□□□□□ -1.35
PTCD3-211ENST00000476215 FDXACB1Q9BRP7 624 aaPredicted RBP6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms