RNA–Protein interactions for RNA: ENST00000475622.5

LPCAT1-202, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

TSL 5

Gene LPCAT1, Length 5,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-202ENST00000475622 TEDDM1Q5T9Z0 273 aa18.88■□□□□ 0.61
LPCAT1-202ENST00000475622 C16orf87Q6PH81 154 aa18.88■□□□□ 0.61
LPCAT1-202ENST00000475622 ATP6V1G3Q96LB4 118 aa18.88■□□□□ 0.61
LPCAT1-202ENST00000475622 DENND3A2RUS2 1198 aa18.87■□□□□ 0.61
LPCAT1-202ENST00000475622 ESRRBO95718 433 aa18.87■□□□□ 0.61
LPCAT1-202ENST00000475622 ENAHQ8N8S7 591 aaPredicted RBP18.87■□□□□ 0.61
LPCAT1-202ENST00000475622 IFT43Q96FT9 208 aa18.87■□□□□ 0.61
LPCAT1-202ENST00000475622 TOPORSQ9NS56 1045 aaPredicted RBP18.87■□□□□ 0.61
LPCAT1-202ENST00000475622 TMEM260Q9NX78 707 aa18.87■□□□□ 0.61
LPCAT1-202ENST00000475622 TEKT2Q9UIF3 430 aa18.87■□□□□ 0.61
LPCAT1-202ENST00000475622 CFAP65Q6ZU64 1925 aaKnown RBP18.87■□□□□ 0.61
LPCAT1-202ENST00000475622 PRDX5P30044 214 aa18.87■□□□□ 0.61
LPCAT1-202ENST00000475622 MKRN3Q13064 507 aaKnown RBP18.87■□□□□ 0.61
LPCAT1-202ENST00000475622 TTC8Q8TAM2 541 aa18.87■□□□□ 0.61
LPCAT1-202ENST00000475622 PIGBQ92521 554 aa18.87■□□□□ 0.61
LPCAT1-202ENST00000475622 GCNAQ96QF7 691 aa18.87■□□□□ 0.61
LPCAT1-202ENST00000475622 NFKBIAP25963 317 aa18.87■□□□□ 0.61
LPCAT1-202ENST00000475622 NAALADL2Q58DX5 795 aa18.87■□□□□ 0.61
LPCAT1-202ENST00000475622 EPHA10Q5JZY3 1008 aa18.87■□□□□ 0.61
LPCAT1-202ENST00000475622 FAM20AQ96MK3 541 aa18.87■□□□□ 0.61
LPCAT1-202ENST00000475622 SLC13A1Q9BZW2 595 aa18.87■□□□□ 0.61
LPCAT1-202ENST00000475622 CCDC90BQ9GZT6 254 aa18.87■□□□□ 0.61
LPCAT1-202ENST00000475622 ECT2Q9H8V3 914 aa18.87■□□□□ 0.61
LPCAT1-202ENST00000475622 MRPL40Q9NQ50 206 aaKnown RBP18.87■□□□□ 0.61
LPCAT1-202ENST00000475622 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.87■□□□□ 0.61
LPCAT1-202ENST00000475622 IMPG1Q17R60 797 aa18.87■□□□□ 0.61
LPCAT1-202ENST00000475622 NUDCD3Q8IVD9 361 aa18.87■□□□□ 0.61
LPCAT1-202ENST00000475622 GANCQ8TET4 914 aa18.87■□□□□ 0.61
LPCAT1-202ENST00000475622 ULK4Q96C45 1275 aa18.87■□□□□ 0.61
LPCAT1-202ENST00000475622 CYP4F11Q9HBI6 524 aa18.87■□□□□ 0.61
LPCAT1-202ENST00000475622 M0QYV0 167 aa18.87■□□□□ 0.61
LPCAT1-202ENST00000475622 HUS1O60921 280 aa18.87■□□□□ 0.61
LPCAT1-202ENST00000475622 KRT14P02533 472 aa18.87■□□□□ 0.61
LPCAT1-202ENST00000475622 PSMC1P62191 440 aaKnown RBP18.87■□□□□ 0.61
LPCAT1-202ENST00000475622 AP2B1P63010 937 aa18.87■□□□□ 0.61
LPCAT1-202ENST00000475622 TNFAIP2Q03169 654 aa18.87■□□□□ 0.61
LPCAT1-202ENST00000475622 KCNA1Q09470 495 aa18.87■□□□□ 0.61
LPCAT1-202ENST00000475622 CCDC137Q6PK04 289 aaKnown RBP18.87■□□□□ 0.61
LPCAT1-202ENST00000475622 FAM167AQ96KS9 214 aa18.87■□□□□ 0.61
LPCAT1-202ENST00000475622 DACH2Q96NX9 599 aa18.87■□□□□ 0.61
LPCAT1-202ENST00000475622 ERBB3P21860 1342 aa18.86■□□□□ 0.61
LPCAT1-202ENST00000475622 METP08581 1390 aa18.86■□□□□ 0.61
LPCAT1-202ENST00000475622 USP17L10C9JJH3 530 aa18.86■□□□□ 0.61
LPCAT1-202ENST00000475622 TBC1D22BQ9NU19 505 aa18.86■□□□□ 0.61
LPCAT1-202ENST00000475622 ERVK-7P63135 1459 aa18.86■□□□□ 0.61
LPCAT1-202ENST00000475622 POTEFA5A3E0 1075 aa18.86■□□□□ 0.61
LPCAT1-202ENST00000475622 SYF2O95926 243 aaKnown RBP18.86■□□□□ 0.61
LPCAT1-202ENST00000475622 POTEIP0CG38 1075 aa18.86■□□□□ 0.61
LPCAT1-202ENST00000475622 ARHGEF6Q15052 776 aa18.86■□□□□ 0.61
LPCAT1-202ENST00000475622 STXBP2Q15833 593 aa18.86■□□□□ 0.61
LPCAT1-202ENST00000475622 HEATR6Q6AI08 1181 aaKnown RBP18.86■□□□□ 0.61
LPCAT1-202ENST00000475622 POTEGQ6S5H5 508 aa18.86■□□□□ 0.61
LPCAT1-202ENST00000475622 POTEEQ6S8J3 1075 aa18.86■□□□□ 0.61
LPCAT1-202ENST00000475622 SCN4BQ8IWT1 228 aa18.86■□□□□ 0.61
LPCAT1-202ENST00000475622 THEM5Q8N1Q8 247 aa18.86■□□□□ 0.61
LPCAT1-202ENST00000475622 SLITRK6Q9H5Y7 841 aa18.86■□□□□ 0.61
LPCAT1-202ENST00000475622 SUGT1Q9Y2Z0 365 aa18.86■□□□□ 0.61
LPCAT1-202ENST00000475622 FAM187AA6NFU0 413 aa18.86■□□□□ 0.61
LPCAT1-202ENST00000475622 GNA15P30679 374 aa18.86■□□□□ 0.61
LPCAT1-202ENST00000475622 IREB2P48200 963 aaKnown RBP18.86■□□□□ 0.61
LPCAT1-202ENST00000475622 LY9Q9HBG7 655 aa18.86■□□□□ 0.61
LPCAT1-202ENST00000475622 IP6K2Q9UHH9 426 aa18.86■□□□□ 0.61
LPCAT1-202ENST00000475622 PP2D1A8MPX8 630 aa18.86■□□□□ 0.61
LPCAT1-202ENST00000475622 GPC3P51654 580 aa18.86■□□□□ 0.61
LPCAT1-202ENST00000475622 EFTUD2Q15029 972 aaKnown RBP eCLIP18.86■□□□□ 0.615e-7■■□□□ 12.3
LPCAT1-202ENST00000475622 SARS2Q9NP81 518 aaKnown RBP18.86■□□□□ 0.61
LPCAT1-202ENST00000475622 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.86■□□□□ 0.61
LPCAT1-202ENST00000475622 ABCB11O95342 1321 aa18.86■□□□□ 0.61
LPCAT1-202ENST00000475622 ADAMTS12P58397 1594 aa18.86■□□□□ 0.61
LPCAT1-202ENST00000475622 CFAP69A5D8W1 941 aa18.85■□□□□ 0.61
LPCAT1-202ENST00000475622 EIF4E1BA6NMX2 242 aaKnown RBP18.85■□□□□ 0.61
LPCAT1-202ENST00000475622 CDC27P30260 824 aa18.85■□□□□ 0.61
LPCAT1-202ENST00000475622 SMAD1Q15797 465 aaKnown RBP18.85■□□□□ 0.61
LPCAT1-202ENST00000475622 SNF8Q96H20 258 aa18.85■□□□□ 0.61
LPCAT1-202ENST00000475622 RAVER2Q9HCJ3 691 aaKnown RBP18.85■□□□□ 0.61
LPCAT1-202ENST00000475622 NDE1Q9NXR1 346 aa18.85■□□□□ 0.61
LPCAT1-202ENST00000475622 SLC9A2Q9UBY0 812 aa18.85■□□□□ 0.61
LPCAT1-202ENST00000475622 FBXL5Q9UKA1 691 aa18.85■□□□□ 0.61
LPCAT1-202ENST00000475622 PLEKHG1Q9ULL1 1385 aa18.85■□□□□ 0.61
LPCAT1-202ENST00000475622 SNAP23O00161 211 aa18.85■□□□□ 0.61
LPCAT1-202ENST00000475622 KRT7P08729 469 aa18.85■□□□□ 0.61
LPCAT1-202ENST00000475622 BCAR1P56945 870 aa18.85■□□□□ 0.61
LPCAT1-202ENST00000475622 KIAA1755Q5JYT7 1200 aa18.85■□□□□ 0.61
LPCAT1-202ENST00000475622 CIAPIN1Q6FI81 312 aa18.85■□□□□ 0.61
LPCAT1-202ENST00000475622 LRRC31Q6UY01 552 aa18.85■□□□□ 0.61
LPCAT1-202ENST00000475622 GLYCTKQ8IVS8 523 aa18.85■□□□□ 0.61
LPCAT1-202ENST00000475622 SLC44A5Q8NCS7 719 aa18.85■□□□□ 0.61
LPCAT1-202ENST00000475622 RAPGEF5Q92565 580 aa18.85■□□□□ 0.61
LPCAT1-202ENST00000475622 MAGEB5Q9BZ81 275 aa18.85■□□□□ 0.61
LPCAT1-202ENST00000475622 PEG3Q9GZU2 1588 aa18.85■□□□□ 0.61
LPCAT1-202ENST00000475622 TBXAS1P24557 533 aaPredicted RBP18.85■□□□□ 0.61
LPCAT1-202ENST00000475622 PHKA2P46019 1235 aa18.85■□□□□ 0.61
LPCAT1-202ENST00000475622 MB21D2Q8IYB1 491 aaPredicted RBP18.85■□□□□ 0.61
LPCAT1-202ENST00000475622 ATP1A1P05023 1023 aaKnown RBP18.85■□□□□ 0.61
LPCAT1-202ENST00000475622 SLC10A5Q5PT55 438 aa18.85■□□□□ 0.61
LPCAT1-202ENST00000475622 ANO5Q75V66 913 aa18.85■□□□□ 0.61
LPCAT1-202ENST00000475622 ATP11CQ8NB49 1132 aa18.85■□□□□ 0.61
LPCAT1-202ENST00000475622 C1orf54Q8WWF1 131 aa18.85■□□□□ 0.61
LPCAT1-202ENST00000475622 QTRT2Q9H974 415 aaKnown RBP18.85■□□□□ 0.61
LPCAT1-202ENST00000475622 CLASP1Q7Z460 1538 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms