RNA–Protein interactions for RNA: ENST00000475467.1

TTC38-206, Transcript of tetratricopeptide repeat domain 38, humanhuman

TSL 3

Gene TTC38, Length 479 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC38-206ENST00000475467 SEPT9Q9UHD8 586 aaPredicted RBP13.88□□□□□ -0.19
TTC38-206ENST00000475467 PCDHA4Q9UN74 947 aa13.88□□□□□ -0.19
TTC38-206ENST00000475467 PTPRZ1P23471 2315 aaPredicted RBP13.88□□□□□ -0.19
TTC38-206ENST00000475467 C2CD4DB7Z1M9 353 aa13.87□□□□□ -0.19
TTC38-206ENST00000475467 ASAP2O43150 1006 aa13.87□□□□□ -0.19
TTC38-206ENST00000475467 ZC3H11AO75152 810 aaKnown RBP eCLIP13.87□□□□□ -0.19
TTC38-206ENST00000475467 REC8O95072 547 aa13.87□□□□□ -0.19
TTC38-206ENST00000475467 GALTP07902 379 aa13.87□□□□□ -0.19
TTC38-206ENST00000475467 NBL1P41271 181 aa13.87□□□□□ -0.19
TTC38-206ENST00000475467 NONOQ15233 471 aaKnown RBP eCLIP13.87□□□□□ -0.19
TTC38-206ENST00000475467 CATSPER4Q7RTX7 472 aa13.87□□□□□ -0.19
TTC38-206ENST00000475467 SRGAP1Q7Z6B7 1085 aa13.87□□□□□ -0.19
TTC38-206ENST00000475467 DAGLBQ8NCG7 672 aa13.87□□□□□ -0.19
TTC38-206ENST00000475467 TBCKQ8TEA7 893 aa13.87□□□□□ -0.19
TTC38-206ENST00000475467 SLC7A3Q8WY07 619 aa13.87□□□□□ -0.19
TTC38-206ENST00000475467 SNX27Q96L92 541 aa13.87□□□□□ -0.19
TTC38-206ENST00000475467 FAM20AQ96MK3 541 aa13.87□□□□□ -0.19
TTC38-206ENST00000475467 JAKMIP1Q96N16 626 aaKnown RBP13.87□□□□□ -0.19
TTC38-206ENST00000475467 MBOAT7Q96N66 472 aa13.87□□□□□ -0.19
TTC38-206ENST00000475467 NAP1L4Q99733 375 aaKnown RBP13.87□□□□□ -0.19
TTC38-206ENST00000475467 SLC26A6Q9BXS9 759 aa13.87□□□□□ -0.19
TTC38-206ENST00000475467 UNC45AQ9H3U1 944 aa13.87□□□□□ -0.19
TTC38-206ENST00000475467 MFSD1Q9H3U5 465 aa13.87□□□□□ -0.19
TTC38-206ENST00000475467 TBC1D13Q9NVG8 400 aa13.87□□□□□ -0.19
TTC38-206ENST00000475467 IGSF9Q9P2J2 1179 aa13.87□□□□□ -0.19
TTC38-206ENST00000475467 SUCLA2Q9P2R7 463 aaPredicted RBP13.87□□□□□ -0.19
TTC38-206ENST00000475467 A0A087WZ62 844 aa13.86□□□□□ -0.19
TTC38-206ENST00000475467 CHMP2AO43633 222 aa13.86□□□□□ -0.19
TTC38-206ENST00000475467 DEXIO95424 95 aa13.86□□□□□ -0.19
TTC38-206ENST00000475467 RPS6KB1P23443 525 aa13.86□□□□□ -0.19
TTC38-206ENST00000475467 CA8P35219 290 aa13.86□□□□□ -0.19
TTC38-206ENST00000475467 PBX3P40426 434 aa13.86□□□□□ -0.19
TTC38-206ENST00000475467 SSRP1Q08945 709 aaKnown RBP13.86□□□□□ -0.19
TTC38-206ENST00000475467 MTERF2Q49AM1 385 aa13.86□□□□□ -0.19
TTC38-206ENST00000475467 CCDC149Q6ZUS6 474 aa13.86□□□□□ -0.19
TTC38-206ENST00000475467 GPR149Q86SP6 731 aa13.86□□□□□ -0.19
TTC38-206ENST00000475467 RHPN2Q8IUC4 686 aa13.86□□□□□ -0.19
TTC38-206ENST00000475467 GPR65Q8IYL9 337 aa13.86□□□□□ -0.19
TTC38-206ENST00000475467 CMASQ8NFW8 434 aaPredicted RBP13.86□□□□□ -0.19
TTC38-206ENST00000475467 SLC22A17Q8WUG5 538 aa13.86□□□□□ -0.19
TTC38-206ENST00000475467 HDAC7Q8WUI4 952 aa13.86□□□□□ -0.19
TTC38-206ENST00000475467 TCP11Q8WWU5 503 aa13.86□□□□□ -0.19
TTC38-206ENST00000475467 STAMQ92783 540 aa13.86□□□□□ -0.19
TTC38-206ENST00000475467 PHKBQ93100 1093 aa13.86□□□□□ -0.19
TTC38-206ENST00000475467 NXPE3Q969Y0 559 aa13.86□□□□□ -0.19
TTC38-206ENST00000475467 FAM193BQ96PV7 902 aaPredicted RBP13.86□□□□□ -0.19
TTC38-206ENST00000475467 CEP89Q96ST8 783 aa13.86□□□□□ -0.19
TTC38-206ENST00000475467 RTP3Q9BQQ7 232 aa13.86□□□□□ -0.19
TTC38-206ENST00000475467 FDXACB1Q9BRP7 624 aaPredicted RBP13.86□□□□□ -0.19
TTC38-206ENST00000475467 APOL5Q9BWW9 433 aa13.86□□□□□ -0.19
TTC38-206ENST00000475467 NRDE2Q9H7Z3 1164 aa13.86□□□□□ -0.19
TTC38-206ENST00000475467 PIN4Q9Y237 131 aaKnown RBP13.86□□□□□ -0.19
TTC38-206ENST00000475467 CPLX1O14810 134 aa13.85□□□□□ -0.19
TTC38-206ENST00000475467 TBX3O15119 743 aa13.85□□□□□ -0.19
TTC38-206ENST00000475467 OFD1O75665 1012 aa13.85□□□□□ -0.19
TTC38-206ENST00000475467 BRD1O95696 1058 aa13.85□□□□□ -0.19
TTC38-206ENST00000475467 GCFC2P16383 781 aaKnown RBP13.85□□□□□ -0.19
TTC38-206ENST00000475467 RFC5P40937 340 aa13.85□□□□□ -0.19
TTC38-206ENST00000475467 QARSP47897 775 aaKnown RBP13.85□□□□□ -0.19
TTC38-206ENST00000475467 NCBP1Q09161 790 aaKnown RBP13.85□□□□□ -0.19
TTC38-206ENST00000475467 RARS2Q5T160 578 aaKnown RBP13.85□□□□□ -0.19
TTC38-206ENST00000475467 OTUD6AQ7L8S5 288 aa13.85□□□□□ -0.19
TTC38-206ENST00000475467 KRT25Q7Z3Z0 450 aa13.85□□□□□ -0.19
TTC38-206ENST00000475467 MRPL10Q7Z7H8 261 aaKnown RBP13.85□□□□□ -0.19
TTC38-206ENST00000475467 BLIDQ8IZY5 108 aa13.85□□□□□ -0.19
TTC38-206ENST00000475467 ZNF274Q96GC6 653 aaPredicted RBP13.85□□□□□ -0.19
TTC38-206ENST00000475467 PHOX2BQ99453 314 aa13.85□□□□□ -0.19
TTC38-206ENST00000475467 SEMA4AQ9H3S1 761 aa13.85□□□□□ -0.19
TTC38-206ENST00000475467 MRPL17Q9NRX2 175 aaKnown RBP13.85□□□□□ -0.19
TTC38-206ENST00000475467 AGPAT5Q9NUQ2 364 aa13.85□□□□□ -0.19
TTC38-206ENST00000475467 VPS54Q9P1Q0 977 aa13.85□□□□□ -0.19
TTC38-206ENST00000475467 PCDHB2Q9Y5E7 798 aa13.85□□□□□ -0.19
TTC38-206ENST00000475467 SPDYE4A6NLX3 237 aa13.84□□□□□ -0.19
TTC38-206ENST00000475467 DDX11L8A8MPP1 907 aa13.84□□□□□ -0.19
TTC38-206ENST00000475467 NT5C1B-RDH14C9J2C7 533 aa13.84□□□□□ -0.19
TTC38-206ENST00000475467 NR1I2O75469 434 aa13.84□□□□□ -0.19
TTC38-206ENST00000475467 STBD1O95210 358 aa13.84□□□□□ -0.19
TTC38-206ENST00000475467 P4HBP07237 508 aaKnown RBP13.84□□□□□ -0.19
TTC38-206ENST00000475467 XBP1P17861 261 aa13.84□□□□□ -0.19
TTC38-206ENST00000475467 PDIA3P30101 505 aaKnown RBP13.84□□□□□ -0.19
TTC38-206ENST00000475467 AXLP30530 894 aa13.84□□□□□ -0.19
TTC38-206ENST00000475467 PPP2R5CQ13362 524 aa13.84□□□□□ -0.19
TTC38-206ENST00000475467 TDGQ13569 410 aa13.84□□□□□ -0.19
TTC38-206ENST00000475467 PTPN14Q15678 1187 aa13.84□□□□□ -0.19
TTC38-206ENST00000475467 UGCGQ16739 394 aa13.84□□□□□ -0.19
TTC38-206ENST00000475467 PPP4R3AQ6IN85 833 aa13.84□□□□□ -0.19
TTC38-206ENST00000475467 HACE1Q8IYU2 909 aa13.84□□□□□ -0.19
TTC38-206ENST00000475467 ETNPPLQ8TBG4 499 aa13.84□□□□□ -0.19
TTC38-206ENST00000475467 PSPC1Q8WXF1 523 aaKnown RBP13.84□□□□□ -0.19
TTC38-206ENST00000475467 CCDC51Q96ER9 411 aa13.84□□□□□ -0.19
TTC38-206ENST00000475467 RSAD1Q9HA92 442 aa13.84□□□□□ -0.19
TTC38-206ENST00000475467 LIMD1Q9UGP4 676 aa13.84□□□□□ -0.19
TTC38-206ENST00000475467 FAN1Q9Y2M0 1017 aa13.84□□□□□ -0.19
TTC38-206ENST00000475467 COL4A3BPQ9Y5P4 624 aa13.84□□□□□ -0.19
TTC38-206ENST00000475467 SNX14Q9Y5W7 946 aa13.84□□□□□ -0.19
TTC38-206ENST00000475467 H0Y858 1186 aa13.83□□□□□ -0.2
TTC38-206ENST00000475467 EDIL3O43854 480 aa13.83□□□□□ -0.2
TTC38-206ENST00000475467 CDKL5O76039 1030 aa13.83□□□□□ -0.2
TTC38-206ENST00000475467 ADH1AP07327 375 aa13.83□□□□□ -0.2
TTC38-206ENST00000475467 KLRC2P26717 231 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms