RNA–Protein interactions for RNA: ENST00000474721.1

PIKFYVE-208, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, human

TSL 4

Gene PIKFYVE, Length 538 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PIKFYVE-208	ENST00000474721	TNPO3	Q9Y5L0	923 aa	Known RBP	4.97	□□□□□ -1.61
PIKFYVE-208	ENST00000474721	MTSS1	O43312	755 aa		4.96	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	OPA1	O60313	960 aa		4.96	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	SCAF4	O95104	1147 aa	Known RBP	4.96	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	LMNA	P02545	664 aa	Known RBP	4.96	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	HK1	P19367	917 aa		4.96	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	ADRA1B	P35368	520 aa		4.96	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	FLT3	P36888	993 aa		4.96	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	RBL2	Q08999	1139 aa		4.96	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	TIGD2	Q4W5G0	525 aa		4.96	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	C2orf27A	Q580R0	203 aa		4.96	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	UBE2R2	Q712K3	238 aa	Predicted RBP	4.96	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	RHOU	Q7L0Q8	258 aa		4.96	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	PHYKPL	Q8IUZ5	450 aa		4.96	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	C7orf31	Q8N865	590 aa		4.96	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	VOPP1	Q96AW1	172 aa		4.96	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	MLST8	Q9BVC4	326 aa		4.96	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	OSBPL6	Q9BZF3	934 aa		4.96	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	CYP4F11	Q9HBI6	524 aa		4.96	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	PTCH2	Q9Y6C5	1203 aa		4.96	□□□□□ -1.62
PIKFYVE-208	ENST00000474721		A0A0A6YYJ9	748 aa		4.95	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	NRP1	O14786	923 aa		4.95	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	TRIM24	O15164	1050 aa		4.95	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	B3GALT2	O43825	422 aa		4.95	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	RAPGEF3	O95398	923 aa		4.95	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	ASL	P04424	464 aa		4.95	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	GYPE	P15421	78 aa		4.95	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	PROZ	P22891	400 aa		4.95	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	LMO1	P25800	156 aa		4.95	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	PTX3	P26022	381 aa	Predicted RBP	4.95	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	MYBPC3	Q14896	1274 aa		4.95	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	C1QL3	Q5VWW1	255 aa		4.95	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	LRRC55	Q6ZSA7	311 aa		4.95	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	HIST1H2AH	Q96KK5	128 aa		4.95	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	HIST1H2AJ	Q99878	128 aa		4.95	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	CPPED1	Q9BRF8	314 aa	Predicted RBP	4.95	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	HAPLN2	Q9GZV7	340 aa		4.95	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	MTG2	Q9H4K7	406 aa		4.95	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	EIF2B4	Q9UI10	523 aa	Known RBP	4.95	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	HDAC5	Q9UQL6	1122 aa		4.95	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	TNFRSF18	Q9Y5U5	241 aa		4.95	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	HOXA3	O43365	443 aa	Predicted RBP	4.94	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	LAG3	P18627	525 aa		4.94	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	SLC9A1	P19634	815 aa		4.94	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	MRPS21	P82921	87 aa	Known RBP	4.94	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	TAP1	Q03518	808 aa		4.94	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	CCDC142	Q17RM4	750 aa		4.94	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	FNDC3B	Q53EP0	1204 aa	Known RBP	4.94	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	PLEKHG4	Q58EX7	1191 aa		4.94	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	FAM83A	Q86UY5	434 aa		4.94	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	ZZZ3	Q8IYH5	903 aa		4.94	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	NOL10	Q9BSC4	688 aa	Known RBP	4.94	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	PITHD1	Q9GZP4	211 aa	Predicted RBP	4.94	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	PTGFRN	Q9P2B2	879 aa		4.94	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	GRXCR1	A8MXD5	290 aa		4.93	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	STC2	O76061	302 aa		4.93	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	PRPF6	O94906	941 aa	Known RBP	4.93	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	NR4A1	P22736	598 aa		4.93	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	HECTD2	Q5U5R9	776 aa		4.93	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	PIK3R6	Q5UE93	754 aa		4.93	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	STRIP1	Q5VSL9	837 aa		4.93	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	IQSEC1	Q6DN90	963 aa		4.93	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	KIAA1841	Q6NSI8	718 aa		4.93	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	KANSL1	Q7Z3B3	1105 aa		4.93	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	GLB1L3	Q8NCI6	653 aa	Predicted RBP	4.93	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	OR5M3	Q8NGP4	307 aa		4.93	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	ELF4	Q99607	663 aa	Predicted RBP	4.93	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	TOR3A	Q9H497	397 aa		4.93	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	TOMM22	Q9NS69	142 aa		4.93	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	B4GALT6	Q9UBX8	382 aa		4.93	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	ZAR1L	A6NP61	321 aa		4.92	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	OPHN1	O60890	802 aa		4.92	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	ALDH1A2	O94788	518 aa		4.92	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	FBL	P22087	321 aa	Known RBP	4.92	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	USP14	P54578	494 aa		4.92	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	FAM214A	Q32MH5	1076 aa		4.92	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	METTL24	Q5JXM2	366 aa		4.92	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	CLUHP3	Q96NS8	147 aa		4.92	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	PDCD2L	Q9BRP1	358 aa		4.92	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	MYL10	Q9BUA6	226 aa		4.92	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	POFUT1	Q9H488	388 aa		4.92	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	ING3	Q9NXR8	418 aa		4.92	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	ZKSCAN5	Q9Y2L8	839 aa		4.92	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	SPO11	Q9Y5K1	396 aa		4.92	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	HS3ST4	Q9Y661	456 aa		4.92	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	DNAJC6	O75061	913 aa		4.91	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	GAA	P10253	952 aa		4.91	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	SUPT20H	Q8NEM7	779 aa		4.91	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	PMFBP1	Q8TBY8	1022 aa		4.91	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	C8orf37	Q96NL8	207 aa		4.91	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	SLC46A2	Q9BY10	475 aa		4.91	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	KCNH6	Q9H252	994 aa		4.91	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	PCSK5	Q92824	1860 aa		4.91	□□□□□ -1.62
PIKFYVE-208	ENST00000474721	COL4A3	Q01955	1670 aa		4.9	□□□□□ -1.62
PIKFYVE-208	ENST00000474721		A0A0A6YYK5	440 aa	Predicted RBP	4.9	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	GRID2IP	A4D2P6	1211 aa		4.9	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	MASP2	O00187	686 aa		4.9	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	CBX4	O00257	560 aa		4.9	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	PCDH8	O95206	1070 aa		4.9	□□□□□ -1.63
PIKFYVE-208	ENST00000474721	JMJD7	P0C870	316 aa		4.9	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms