RNA–Protein interactions for RNA: ENST00000474272.1

TMEM50B-208, Transcript of transmembrane protein 50B, human

TSL 3

Gene TMEM50B, Length 518 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM50B-208	ENST00000474272	ACSS2	Q9NR19	701 aa		5.25	□□□□□ -1.57
TMEM50B-208	ENST00000474272	TMA7	Q9Y2S6	64 aa	Known RBP	5.25	□□□□□ -1.57
TMEM50B-208	ENST00000474272	TNPO3	Q9Y5L0	923 aa	Known RBP	5.25	□□□□□ -1.57
TMEM50B-208	ENST00000474272	GOLGA6L6	A8MZA4	724 aa		5.24	□□□□□ -1.57
TMEM50B-208	ENST00000474272	IL12RB1	P42701	662 aa		5.24	□□□□□ -1.57
TMEM50B-208	ENST00000474272	KIR2DL3	P43628	341 aa		5.24	□□□□□ -1.57
TMEM50B-208	ENST00000474272	NPEPPS	P55786	919 aa		5.24	□□□□□ -1.57
TMEM50B-208	ENST00000474272	SQSTM1	Q13501	440 aa		5.24	□□□□□ -1.57
TMEM50B-208	ENST00000474272	RHOU	Q7L0Q8	258 aa		5.24	□□□□□ -1.57
TMEM50B-208	ENST00000474272	BMP8A	Q7Z5Y6	402 aa		5.24	□□□□□ -1.57
TMEM50B-208	ENST00000474272	CMTM4	Q8IZR5	234 aa		5.24	□□□□□ -1.57
TMEM50B-208	ENST00000474272	THAP3	Q8WTV1	239 aa	Predicted RBP	5.24	□□□□□ -1.57
TMEM50B-208	ENST00000474272	ST8SIA2	Q92186	375 aa		5.24	□□□□□ -1.57
TMEM50B-208	ENST00000474272	MYL10	Q9BUA6	226 aa		5.24	□□□□□ -1.57
TMEM50B-208	ENST00000474272	ZNF768	Q9H5H4	540 aa	Known RBP	5.24	□□□□□ -1.57
TMEM50B-208	ENST00000474272	ING3	Q9NXR8	418 aa		5.24	□□□□□ -1.57
TMEM50B-208	ENST00000474272		A0A0A6YYK5	440 aa	Predicted RBP	5.23	□□□□□ -1.57
TMEM50B-208	ENST00000474272		H7C1D1	291 aa		5.23	□□□□□ -1.57
TMEM50B-208	ENST00000474272	ZFP36	P26651	326 aa	Known RBP	5.23	□□□□□ -1.57
TMEM50B-208	ENST00000474272	ADRA1B	P35368	520 aa		5.23	□□□□□ -1.57
TMEM50B-208	ENST00000474272	SPIDR	Q14159	915 aa		5.23	□□□□□ -1.57
TMEM50B-208	ENST00000474272	PIK3R6	Q5UE93	754 aa		5.23	□□□□□ -1.57
TMEM50B-208	ENST00000474272	SDE2	Q6IQ49	451 aa		5.23	□□□□□ -1.57
TMEM50B-208	ENST00000474272	MFSD5	Q6N075	450 aa		5.23	□□□□□ -1.57
TMEM50B-208	ENST00000474272	ESRP1	Q6NXG1	681 aa	Known RBP	5.23	□□□□□ -1.57
TMEM50B-208	ENST00000474272	HTR3D	Q70Z44	454 aa		5.23	□□□□□ -1.57
TMEM50B-208	ENST00000474272	SYNE4	Q8N205	404 aa		5.23	□□□□□ -1.57
TMEM50B-208	ENST00000474272	LENG9	Q96B70	501 aa		5.23	□□□□□ -1.57
TMEM50B-208	ENST00000474272	ELF4	Q99607	663 aa	Predicted RBP	5.23	□□□□□ -1.57
TMEM50B-208	ENST00000474272	SOX7	Q9BT81	388 aa		5.23	□□□□□ -1.57
TMEM50B-208	ENST00000474272	POFUT1	Q9H488	388 aa		5.23	□□□□□ -1.57
TMEM50B-208	ENST00000474272	MTG2	Q9H4K7	406 aa		5.23	□□□□□ -1.57
TMEM50B-208	ENST00000474272	SHROOM4	Q9ULL8	1493 aa		5.22	□□□□□ -1.57
TMEM50B-208	ENST00000474272	OPA1	O60313	960 aa		5.22	□□□□□ -1.57
TMEM50B-208	ENST00000474272	DNAJC8	O75937	253 aa	Predicted RBP	5.22	□□□□□ -1.57
TMEM50B-208	ENST00000474272	IPO13	O94829	963 aa	Known RBP	5.22	□□□□□ -1.57
TMEM50B-208	ENST00000474272	PRPF6	O94906	941 aa	Known RBP	5.22	□□□□□ -1.57
TMEM50B-208	ENST00000474272	SCAF4	O95104	1147 aa	Known RBP	5.22	□□□□□ -1.57
TMEM50B-208	ENST00000474272	ABHD16A	O95870	558 aa		5.22	□□□□□ -1.57
TMEM50B-208	ENST00000474272	CYP17A1	P05093	508 aa		5.22	□□□□□ -1.57
TMEM50B-208	ENST00000474272	GNAT2	P19087	354 aa		5.22	□□□□□ -1.57
TMEM50B-208	ENST00000474272	BCAR1	P56945	870 aa		5.22	□□□□□ -1.57
TMEM50B-208	ENST00000474272	ADCY2	Q08462	1091 aa		5.22	□□□□□ -1.57
TMEM50B-208	ENST00000474272	PTPA	Q15257	358 aa		5.22	□□□□□ -1.57
TMEM50B-208	ENST00000474272	ZNF174	Q15697	407 aa		5.22	□□□□□ -1.57
TMEM50B-208	ENST00000474272	RTF1	Q92541	710 aa	Known RBP	5.22	□□□□□ -1.57
TMEM50B-208	ENST00000474272	RPGR	Q92834	1020 aa	Known RBP	5.22	□□□□□ -1.57
TMEM50B-208	ENST00000474272	UIMC1	Q96RL1	719 aa		5.22	□□□□□ -1.57
TMEM50B-208	ENST00000474272	HAPLN2	Q9GZV7	340 aa		5.22	□□□□□ -1.57
TMEM50B-208	ENST00000474272	EPC1	Q9H2F5	836 aa		5.22	□□□□□ -1.57
TMEM50B-208	ENST00000474272	C14orf93	Q9H972	538 aa	Known RBP	5.22	□□□□□ -1.57
TMEM50B-208	ENST00000474272	H2AFY2	Q9P0M6	372 aa	Predicted RBP	5.22	□□□□□ -1.57
TMEM50B-208	ENST00000474272	FZD1	Q9UP38	647 aa		5.22	□□□□□ -1.57
TMEM50B-208	ENST00000474272		A0A0A6YYJ9	748 aa		5.21	□□□□□ -1.58
TMEM50B-208	ENST00000474272	CCDC163	A0A0D9SF12	145 aa		5.21	□□□□□ -1.58
TMEM50B-208	ENST00000474272	ENPP3	O14638	875 aa		5.21	□□□□□ -1.58
TMEM50B-208	ENST00000474272	PLD2	O14939	933 aa		5.21	□□□□□ -1.58
TMEM50B-208	ENST00000474272	LPXN	O60711	386 aa		5.21	□□□□□ -1.58
TMEM50B-208	ENST00000474272	ITGB1	P05556	798 aa		5.21	□□□□□ -1.58
TMEM50B-208	ENST00000474272	IGFALS	P35858	605 aa		5.21	□□□□□ -1.58
TMEM50B-208	ENST00000474272	EPHA7	Q15375	998 aa		5.21	□□□□□ -1.58
TMEM50B-208	ENST00000474272	LY6G5C	Q5SRR4	150 aa		5.21	□□□□□ -1.58
TMEM50B-208	ENST00000474272	KCNV1	Q6PIU1	500 aa		5.21	□□□□□ -1.58
TMEM50B-208	ENST00000474272	VOPP1	Q96AW1	172 aa		5.21	□□□□□ -1.58
TMEM50B-208	ENST00000474272	CPPED1	Q9BRF8	314 aa	Predicted RBP	5.21	□□□□□ -1.58
TMEM50B-208	ENST00000474272	NOL10	Q9BSC4	688 aa	Known RBP	5.21	□□□□□ -1.58
TMEM50B-208	ENST00000474272	CABP5	Q9NP86	173 aa		5.21	□□□□□ -1.58
TMEM50B-208	ENST00000474272	TOMM22	Q9NS69	142 aa		5.21	□□□□□ -1.58
TMEM50B-208	ENST00000474272	TMEM260	Q9NX78	707 aa		5.21	□□□□□ -1.58
TMEM50B-208	ENST00000474272	ZNHIT2	Q9UHR6	403 aa		5.21	□□□□□ -1.58
TMEM50B-208	ENST00000474272	SYNPO2	Q9UMS6	1093 aa		5.21	□□□□□ -1.58
TMEM50B-208	ENST00000474272	CADPS	Q9ULU8	1353 aa		5.2	□□□□□ -1.58
TMEM50B-208	ENST00000474272	GRID2IP	A4D2P6	1211 aa		5.2	□□□□□ -1.58
TMEM50B-208	ENST00000474272	HOXA3	O43365	443 aa	Predicted RBP	5.2	□□□□□ -1.58
TMEM50B-208	ENST00000474272	LMNA	P02545	664 aa	Known RBP	5.2	□□□□□ -1.58
TMEM50B-208	ENST00000474272	SDS	P20132	328 aa		5.2	□□□□□ -1.58
TMEM50B-208	ENST00000474272	CASR	P41180	1078 aa		5.2	□□□□□ -1.58
TMEM50B-208	ENST00000474272	FAM189B	P81408	668 aa		5.2	□□□□□ -1.58
TMEM50B-208	ENST00000474272	HNRNPA0	Q13151	305 aa	Known RBP	5.2	□□□□□ -1.58
TMEM50B-208	ENST00000474272	KANSL1	Q7Z3B3	1105 aa		5.2	□□□□□ -1.58
TMEM50B-208	ENST00000474272	FAM177A1	Q8N128	213 aa	Predicted RBP	5.2	□□□□□ -1.58
TMEM50B-208	ENST00000474272	PIK3C3	Q8NEB9	887 aa		5.2	□□□□□ -1.58
TMEM50B-208	ENST00000474272	FAM193B	Q96PV7	902 aa	Predicted RBP	5.2	□□□□□ -1.58
TMEM50B-208	ENST00000474272	CPEB1	Q9BZB8	566 aa	Known RBP	5.2	□□□□□ -1.58
TMEM50B-208	ENST00000474272	PITHD1	Q9GZP4	211 aa	Predicted RBP	5.2	□□□□□ -1.58
TMEM50B-208	ENST00000474272	RIOX1	Q9H6W3	641 aa		5.2	□□□□□ -1.58
TMEM50B-208	ENST00000474272	FANCL	Q9NW38	375 aa		5.2	□□□□□ -1.58
TMEM50B-208	ENST00000474272	PACSIN3	Q9UKS6	424 aa		5.2	□□□□□ -1.58
TMEM50B-208	ENST00000474272	AHRR	A9YTQ3	701 aa		5.19	□□□□□ -1.58
TMEM50B-208	ENST00000474272		B4E1Z4	1266 aa		5.19	□□□□□ -1.58
TMEM50B-208	ENST00000474272	PPP1R12A	O14974	1030 aa	Predicted RBP	5.19	□□□□□ -1.58
TMEM50B-208	ENST00000474272	OPHN1	O60890	802 aa		5.19	□□□□□ -1.58
TMEM50B-208	ENST00000474272	PCDH8	O95206	1070 aa		5.19	□□□□□ -1.58
TMEM50B-208	ENST00000474272	ASL	P04424	464 aa		5.19	□□□□□ -1.58
TMEM50B-208	ENST00000474272	JMJD7	P0C870	316 aa		5.19	□□□□□ -1.58
TMEM50B-208	ENST00000474272	GAA	P10253	952 aa		5.19	□□□□□ -1.58
TMEM50B-208	ENST00000474272	CD69	Q07108	199 aa		5.19	□□□□□ -1.58
TMEM50B-208	ENST00000474272	TIGD2	Q4W5G0	525 aa		5.19	□□□□□ -1.58
TMEM50B-208	ENST00000474272	CREB3L3	Q68CJ9	461 aa		5.19	□□□□□ -1.58
TMEM50B-208	ENST00000474272	CDCA2	Q69YH5	1023 aa	Predicted RBP	5.19	□□□□□ -1.58

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