RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 XPAP23025 273 aaPredicted RBP7.65□□□□□ -1.18
CLK1-209ENST00000472679 SESN2P58004 480 aaPredicted RBP7.65□□□□□ -1.18
CLK1-209ENST00000472679 NFYCQ13952 458 aa7.65□□□□□ -1.18
CLK1-209ENST00000472679 SPIDRQ14159 915 aa7.65□□□□□ -1.18
CLK1-209ENST00000472679 CLUL1Q15846 466 aa7.65□□□□□ -1.18
CLK1-209ENST00000472679 PTPN21Q16825 1174 aa7.65□□□□□ -1.18
CLK1-209ENST00000472679 CCDC178Q5BJE1 867 aa7.65□□□□□ -1.18
CLK1-209ENST00000472679 ARHGEF18Q6ZSZ5 1173 aa7.65□□□□□ -1.18
CLK1-209ENST00000472679 IFT122Q9HBG6 1241 aa7.65□□□□□ -1.18
CLK1-209ENST00000472679 A0A1W2PR48 441 aa7.64□□□□□ -1.19
CLK1-209ENST00000472679 SHTN1A0MZ66 631 aa7.64□□□□□ -1.19
CLK1-209ENST00000472679 PPM1GO15355 546 aaPredicted RBP7.64□□□□□ -1.19
CLK1-209ENST00000472679 NRP2O60462 931 aa7.64□□□□□ -1.19
CLK1-209ENST00000472679 FSBPO95073 299 aa7.64□□□□□ -1.19
CLK1-209ENST00000472679 AGXTP21549 392 aa7.64□□□□□ -1.19
CLK1-209ENST00000472679 MAN2A1Q16706 1144 aa7.64□□□□□ -1.19
CLK1-209ENST00000472679 TBC1D10BQ4KMP7 808 aaPredicted RBP7.64□□□□□ -1.19
CLK1-209ENST00000472679 ZFYVE27Q5T4F4 411 aa7.64□□□□□ -1.19
CLK1-209ENST00000472679 TTLL10Q6ZVT0 673 aa7.64□□□□□ -1.19
CLK1-209ENST00000472679 PLEKHH3Q7Z736 793 aa7.64□□□□□ -1.19
CLK1-209ENST00000472679 AMOTL1Q8IY63 956 aa7.64□□□□□ -1.19
CLK1-209ENST00000472679 PLA2G15Q8NCC3 412 aa7.64□□□□□ -1.19
CLK1-209ENST00000472679 GCDHQ92947 438 aaPredicted RBP7.64□□□□□ -1.19
CLK1-209ENST00000472679 NEIL1Q96FI4 390 aaPredicted RBP7.64□□□□□ -1.19
CLK1-209ENST00000472679 C20orf173Q96LM9 149 aa7.64□□□□□ -1.19
CLK1-209ENST00000472679 MEGF9Q9H1U4 602 aa7.64□□□□□ -1.19
CLK1-209ENST00000472679 ZNF277Q9NRM2 450 aaPredicted RBP7.64□□□□□ -1.19
CLK1-209ENST00000472679 GPR45Q9Y5Y3 372 aa7.64□□□□□ -1.19
CLK1-209ENST00000472679 DAPK3O43293 454 aa7.63□□□□□ -1.19
CLK1-209ENST00000472679 LAMTOR5O43504 91 aa7.63□□□□□ -1.19
CLK1-209ENST00000472679 TMEM127O75204 238 aa7.63□□□□□ -1.19
CLK1-209ENST00000472679 CFBP00751 764 aa7.63□□□□□ -1.19
CLK1-209ENST00000472679 ADCY7P51828 1080 aa7.63□□□□□ -1.19
CLK1-209ENST00000472679 EPHB4P54760 987 aa7.63□□□□□ -1.19
CLK1-209ENST00000472679 NRG3P56975 720 aa7.63□□□□□ -1.19
CLK1-209ENST00000472679 TCIRG1Q13488 830 aa7.63□□□□□ -1.19
CLK1-209ENST00000472679 PLEKHG6Q3KR16 790 aa7.63□□□□□ -1.19
CLK1-209ENST00000472679 ZNF568Q3ZCX4 644 aa7.63□□□□□ -1.19
CLK1-209ENST00000472679 UBXN11Q5T124 520 aa7.63□□□□□ -1.19
CLK1-209ENST00000472679 LMBR1LQ6UX01 489 aa7.63□□□□□ -1.19
CLK1-209ENST00000472679 GLB1L2Q8IW92 636 aa7.63□□□□□ -1.19
CLK1-209ENST00000472679 JADE3Q92613 823 aa7.63□□□□□ -1.19
CLK1-209ENST00000472679 SLC7A6OSQ96CW6 309 aaPredicted RBP7.63□□□□□ -1.19
CLK1-209ENST00000472679 LRRC37BQ96QE4 947 aa7.63□□□□□ -1.19
CLK1-209ENST00000472679 DPYSL5Q9BPU6 564 aa7.63□□□□□ -1.19
CLK1-209ENST00000472679 PPP4R1LQ9P1A2 415 aa7.63□□□□□ -1.19
CLK1-209ENST00000472679 ALDH1L1O75891 902 aa7.62□□□□□ -1.19
CLK1-209ENST00000472679 MTHFD2P13995 350 aa7.62□□□□□ -1.19
CLK1-209ENST00000472679 BPIFB4P59827 614 aa7.62□□□□□ -1.19
CLK1-209ENST00000472679 ADAM8P78325 824 aa7.62□□□□□ -1.19
CLK1-209ENST00000472679 SAFB2Q14151 953 aaKnown RBP eCLIP7.62□□□□□ -1.19
CLK1-209ENST00000472679 ODF1Q14990 250 aa7.62□□□□□ -1.19
CLK1-209ENST00000472679 ACAP2Q15057 778 aa7.62□□□□□ -1.19
CLK1-209ENST00000472679 ADRM1Q16186 407 aa7.62□□□□□ -1.19
CLK1-209ENST00000472679 FBLN7Q53RD9 439 aa7.62□□□□□ -1.19
CLK1-209ENST00000472679 UNC5BQ8IZJ1 945 aa7.62□□□□□ -1.19
CLK1-209ENST00000472679 MSL3Q8N5Y2 521 aaKnown RBP7.62□□□□□ -1.19
CLK1-209ENST00000472679 ANKRD53Q8N9V6 530 aa7.62□□□□□ -1.19
CLK1-209ENST00000472679 RPL10LQ96L21 214 aaKnown RBP7.62□□□□□ -1.19
CLK1-209ENST00000472679 TEPSINQ96N21 525 aa7.62□□□□□ -1.19
CLK1-209ENST00000472679 UIMC1Q96RL1 719 aa7.62□□□□□ -1.19
CLK1-209ENST00000472679 LMF1Q96S06 567 aa7.62□□□□□ -1.19
CLK1-209ENST00000472679 JADE2Q9NQC1 790 aa7.62□□□□□ -1.19
CLK1-209ENST00000472679 ING3Q9NXR8 418 aa7.62□□□□□ -1.19
CLK1-209ENST00000472679 ZNF536O15090 1300 aa7.61□□□□□ -1.19
CLK1-209ENST00000472679 XPOTO43592 962 aaKnown RBP7.61□□□□□ -1.19
CLK1-209ENST00000472679 TOX4O94842 621 aa7.61□□□□□ -1.19
CLK1-209ENST00000472679 PLATP00750 562 aa7.61□□□□□ -1.19
CLK1-209ENST00000472679 RAC3P60763 192 aa7.61□□□□□ -1.19
CLK1-209ENST00000472679 UBE3CQ15386 1083 aa7.61□□□□□ -1.19
CLK1-209ENST00000472679 ABHD15Q6UXT9 468 aa7.61□□□□□ -1.19
CLK1-209ENST00000472679 LPPQ93052 612 aa7.61□□□□□ -1.19
CLK1-209ENST00000472679 GNRHR2Q96P88 292 aa7.61□□□□□ -1.19
CLK1-209ENST00000472679 CEP89Q96ST8 783 aa7.61□□□□□ -1.19
CLK1-209ENST00000472679 GPHA2Q96T91 129 aa7.61□□□□□ -1.19
CLK1-209ENST00000472679 ACE2Q9BYF1 805 aaPredicted RBP7.61□□□□□ -1.19
CLK1-209ENST00000472679 SLC6A15Q9H2J7 730 aa7.61□□□□□ -1.19
CLK1-209ENST00000472679 AGO3Q9H9G7 860 aaKnown RBP7.61□□□□□ -1.19
CLK1-209ENST00000472679 SEC61A2Q9H9S3 476 aa7.61□□□□□ -1.19
CLK1-209ENST00000472679 DMRT3Q9NQL9 472 aa7.61□□□□□ -1.19
CLK1-209ENST00000472679 RTEL1Q9NZ71 1219 aa7.61□□□□□ -1.19
CLK1-209ENST00000472679 PUF60Q9UHX1 559 aaKnown RBP7.61□□□□□ -1.19
CLK1-209ENST00000472679 OAZ3Q9UMX2 235 aa7.61□□□□□ -1.19
CLK1-209ENST00000472679 KLHL33A6NCF5 533 aa7.6□□□□□ -1.19
CLK1-209ENST00000472679 ALDH1A2O94788 518 aa7.6□□□□□ -1.19
CLK1-209ENST00000472679 KIR2DL3P43628 341 aa7.6□□□□□ -1.19
CLK1-209ENST00000472679 NEK2P51955 445 aa7.6□□□□□ -1.19
CLK1-209ENST00000472679 TTF1Q15361 905 aaPredicted RBP7.6□□□□□ -1.19
CLK1-209ENST00000472679 SURF1Q15526 300 aa7.6□□□□□ -1.19
CLK1-209ENST00000472679 LCE3BQ5TA77 95 aa7.6□□□□□ -1.19
CLK1-209ENST00000472679 TAS1R1Q7RTX1 841 aa7.6□□□□□ -1.19
CLK1-209ENST00000472679 LIMS2Q7Z4I7 341 aa7.6□□□□□ -1.19
CLK1-209ENST00000472679 RAVER1Q8IY67 606 aaKnown RBP7.6□□□□□ -1.19
CLK1-209ENST00000472679 GPR135Q8IZ08 494 aa7.6□□□□□ -1.19
CLK1-209ENST00000472679 PPM1NQ8N819 430 aa7.6□□□□□ -1.19
CLK1-209ENST00000472679 GLB1L3Q8NCI6 653 aaPredicted RBP7.6□□□□□ -1.19
CLK1-209ENST00000472679 SLC13A1Q9BZW2 595 aa7.6□□□□□ -1.19
CLK1-209ENST00000472679 C12orf65Q9H3J6 166 aaKnown RBP7.6□□□□□ -1.19
CLK1-209ENST00000472679 SCOCQ9UIL1 159 aa7.6□□□□□ -1.19
CLK1-209ENST00000472679 THRAP3Q9Y2W1 955 aaKnown RBP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms