RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 METAP2P50579 478 aaKnown RBP eCLIP10.56□□□□□ -0.72
VCL-204ENST00000472585 GPC3P51654 580 aa10.56□□□□□ -0.72
VCL-204ENST00000472585 BCAR1P56945 870 aa10.56□□□□□ -0.72
VCL-204ENST00000472585 UGCGQ16739 394 aa10.56□□□□□ -0.72
VCL-204ENST00000472585 PPP1R18Q6NYC8 613 aa10.56□□□□□ -0.72
VCL-204ENST00000472585 SKAP1Q86WV1 359 aa10.56□□□□□ -0.72
VCL-204ENST00000472585 RNF169Q8NCN4 708 aa10.56□□□□□ -0.72
VCL-204ENST00000472585 LPPQ93052 612 aa10.56□□□□□ -0.72
VCL-204ENST00000472585 CEP89Q96ST8 783 aa10.56□□□□□ -0.72
VCL-204ENST00000472585 ESYT1Q9BSJ8 1104 aa10.56□□□□□ -0.72
VCL-204ENST00000472585 ZNF577Q9BSK1 485 aa10.56□□□□□ -0.72
VCL-204ENST00000472585 DUSP12Q9UNI6 340 aa10.56□□□□□ -0.72
VCL-204ENST00000472585 PCDHA10Q9Y5I2 948 aa10.56□□□□□ -0.72
VCL-204ENST00000472585 DENND4AQ7Z401 1863 aa10.55□□□□□ -0.72
VCL-204ENST00000472585 TMEM150BA6NC51 233 aa10.55□□□□□ -0.72
VCL-204ENST00000472585 DARSP14868 501 aaKnown RBP10.55□□□□□ -0.72
VCL-204ENST00000472585 AFF1P51825 1210 aaKnown RBP10.55□□□□□ -0.72
VCL-204ENST00000472585 TBC1D8BQ0IIM8 1120 aa10.55□□□□□ -0.72
VCL-204ENST00000472585 AP3B2Q13367 1082 aa10.55□□□□□ -0.72
VCL-204ENST00000472585 NONOQ15233 471 aaKnown RBP eCLIP10.55□□□□□ -0.72
VCL-204ENST00000472585 ST3GAL2Q16842 350 aa10.55□□□□□ -0.72
VCL-204ENST00000472585 LONRF3Q496Y0 759 aa10.55□□□□□ -0.72
VCL-204ENST00000472585 ZNF746Q6NUN9 644 aaPredicted RBP10.55□□□□□ -0.72
VCL-204ENST00000472585 CCDC149Q6ZUS6 474 aa10.55□□□□□ -0.72
VCL-204ENST00000472585 CABP7Q86V35 215 aa10.55□□□□□ -0.72
VCL-204ENST00000472585 CKAP2LQ8IYA6 745 aa10.55□□□□□ -0.72
VCL-204ENST00000472585 VPS52Q8N1B4 723 aa10.55□□□□□ -0.72
VCL-204ENST00000472585 LRRC43Q8N309 656 aa10.55□□□□□ -0.72
VCL-204ENST00000472585 DCLK2Q8N568 766 aa10.55□□□□□ -0.72
VCL-204ENST00000472585 SH2D3AQ9BRG2 576 aa10.55□□□□□ -0.72
VCL-204ENST00000472585 ZBP1Q9H171 429 aa10.55□□□□□ -0.72
VCL-204ENST00000472585 KCNK12Q9HB15 430 aa10.55□□□□□ -0.72
VCL-204ENST00000472585 AKT3Q9Y243 479 aa10.55□□□□□ -0.72
VCL-204ENST00000472585 BAHCC1Q9P281 2608 aa10.55□□□□□ -0.72
VCL-204ENST00000472585 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.54□□□□□ -0.72
VCL-204ENST00000472585 LILRB3O75022 631 aa10.54□□□□□ -0.72
VCL-204ENST00000472585 N4BP1O75113 896 aaKnown RBP10.54□□□□□ -0.72
VCL-204ENST00000472585 GALTP07902 379 aa10.54□□□□□ -0.72
VCL-204ENST00000472585 CFHP08603 1231 aa10.54□□□□□ -0.72
VCL-204ENST00000472585 CPA1P15085 419 aa10.54□□□□□ -0.72
VCL-204ENST00000472585 ZSCAN20P17040 1043 aaPredicted RBP10.54□□□□□ -0.72
VCL-204ENST00000472585 CIITAP33076 1130 aa10.54□□□□□ -0.72
VCL-204ENST00000472585 ALDH7A1P49419 539 aaKnown RBP10.54□□□□□ -0.72
VCL-204ENST00000472585 TARBP2Q15633 366 aaKnown RBP10.54□□□□□ -0.72
VCL-204ENST00000472585 RTN1Q16799 776 aa10.54□□□□□ -0.72
VCL-204ENST00000472585 PFKFB3Q16875 520 aaPredicted RBP10.54□□□□□ -0.72
VCL-204ENST00000472585 SPECC1Q5M775 1068 aa10.54□□□□□ -0.72
VCL-204ENST00000472585 KIAA0319Q5VV43 1072 aa10.54□□□□□ -0.72
VCL-204ENST00000472585 TMC5Q6UXY8 1006 aa10.54□□□□□ -0.72
VCL-204ENST00000472585 TMEM169Q96HH4 297 aa10.54□□□□□ -0.72
VCL-204ENST00000472585 ZMYND12Q9H0C1 365 aa10.54□□□□□ -0.72
VCL-204ENST00000472585 NRDE2Q9H7Z3 1164 aa10.54□□□□□ -0.72
VCL-204ENST00000472585 TBC1D22BQ9NU19 505 aa10.54□□□□□ -0.72
VCL-204ENST00000472585 RBM28Q9NW13 759 aaKnown RBP10.54□□□□□ -0.72
VCL-204ENST00000472585 IGSF9Q9P2J2 1179 aa10.54□□□□□ -0.72
VCL-204ENST00000472585 NCDNQ9UBB6 729 aa10.54□□□□□ -0.72
VCL-204ENST00000472585 WNT16Q9UBV4 365 aa10.54□□□□□ -0.72
VCL-204ENST00000472585 DNAJB4Q9UDY4 337 aa10.54□□□□□ -0.72
VCL-204ENST00000472585 IRAK3Q9Y616 596 aa10.54□□□□□ -0.72
VCL-204ENST00000472585 CACNA1IQ9P0X4 2223 aa10.54□□□□□ -0.72
VCL-204ENST00000472585 MSH4O15457 936 aa10.53□□□□□ -0.72
VCL-204ENST00000472585 MAGEB2O15479 319 aa10.53□□□□□ -0.72
VCL-204ENST00000472585 ZBTB43O43298 467 aa10.53□□□□□ -0.72
VCL-204ENST00000472585 KINO60870 393 aaKnown RBP10.53□□□□□ -0.72
VCL-204ENST00000472585 PSAPP07602 524 aa10.53□□□□□ -0.72
VCL-204ENST00000472585 SP9P0CG40 484 aa10.53□□□□□ -0.72
VCL-204ENST00000472585 PHKA2P46019 1235 aa10.53□□□□□ -0.72
VCL-204ENST00000472585 IRX6P78412 446 aaPredicted RBP10.53□□□□□ -0.72
VCL-204ENST00000472585 GIT2Q14161 759 aa10.53□□□□□ -0.72
VCL-204ENST00000472585 PRR16Q569H4 304 aa10.53□□□□□ -0.72
VCL-204ENST00000472585 POTEGQ6S5H5 508 aa10.53□□□□□ -0.72
VCL-204ENST00000472585 ZNF280BQ86YH2 543 aa10.53□□□□□ -0.72
VCL-204ENST00000472585 TEX2Q8IWB9 1127 aa10.53□□□□□ -0.72
VCL-204ENST00000472585 SMAP1Q8IYB5 467 aaPredicted RBP10.53□□□□□ -0.72
VCL-204ENST00000472585 GPR161Q8N6U8 529 aaKnown RBP10.53□□□□□ -0.72
VCL-204ENST00000472585 SECISBP2LQ93073 1101 aaKnown RBP10.53□□□□□ -0.72
VCL-204ENST00000472585 IGSF21Q96ID5 467 aa10.53□□□□□ -0.72
VCL-204ENST00000472585 CHAMP1Q96JM3 812 aa10.53□□□□□ -0.72
VCL-204ENST00000472585 YTHDC1Q96MU7 727 aaKnown RBP10.53□□□□□ -0.72
VCL-204ENST00000472585 DISC1Q9NRI5 854 aa10.53□□□□□ -0.72
VCL-204ENST00000472585 TBC1D13Q9NVG8 400 aa10.53□□□□□ -0.72
VCL-204ENST00000472585 C2orf16Q68DN1 1984 aa10.53□□□□□ -0.72
VCL-204ENST00000472585 IGKV6-21A0A0C4DH24 114 aa10.52□□□□□ -0.73
VCL-204ENST00000472585 KLF18A0A0U1RQI7 1052 aa10.52□□□□□ -0.73
VCL-204ENST00000472585 GOLGA8AA7E2F4 631 aa10.52□□□□□ -0.73
VCL-204ENST00000472585 GOLGA8BA8MQT2 603 aa10.52□□□□□ -0.73
VCL-204ENST00000472585 hCG_1984214I3L0E3 225 aa10.52□□□□□ -0.73
VCL-204ENST00000472585 SNPHO15079 494 aa10.52□□□□□ -0.73
VCL-204ENST00000472585 NARSO43776 548 aaKnown RBP10.52□□□□□ -0.73
VCL-204ENST00000472585 ZC3H11AO75152 810 aaKnown RBP eCLIP10.52□□□□□ -0.73
VCL-204ENST00000472585 OFD1O75665 1012 aa10.52□□□□□ -0.73
VCL-204ENST00000472585 DDHD2O94830 711 aa10.52□□□□□ -0.73
VCL-204ENST00000472585 OATP04181 439 aa10.52□□□□□ -0.73
VCL-204ENST00000472585 CTSAP10619 480 aa10.52□□□□□ -0.73
VCL-204ENST00000472585 SLC11A1P49279 550 aa10.52□□□□□ -0.73
VCL-204ENST00000472585 PRKCEQ02156 737 aa10.52□□□□□ -0.73
VCL-204ENST00000472585 PTPN14Q15678 1187 aa10.52□□□□□ -0.73
VCL-204ENST00000472585 B3GNT9Q6UX72 402 aa10.52□□□□□ -0.73
VCL-204ENST00000472585 DHX32Q7L7V1 743 aaKnown RBP10.52□□□□□ -0.73
VCL-204ENST00000472585 TAS1R1Q7RTX1 841 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms