RNA–Protein interactions for RNA: ENST00000472490.1

BRCA1-211, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-211ENST00000472490 RCOR1Q9UKL0 485 aa15.71■□□□□ 0.11
BRCA1-211ENST00000472490 YBX2Q9Y2T7 364 aaKnown RBP15.71■□□□□ 0.11
BRCA1-211ENST00000472490 ZDHHC9Q9Y397 364 aa15.71■□□□□ 0.11
BRCA1-211ENST00000472490 A0A0U1RQF3 1178 aa15.7■□□□□ 0.1
BRCA1-211ENST00000472490 C9IYK1 514 aa15.7■□□□□ 0.1
BRCA1-211ENST00000472490 HOXA2O43364 376 aa15.7■□□□□ 0.1
BRCA1-211ENST00000472490 MGEA5O60502 916 aa15.7■□□□□ 0.1
BRCA1-211ENST00000472490 HIP1RO75146 1068 aa15.7■□□□□ 0.1
BRCA1-211ENST00000472490 DGKIO75912 1065 aa15.7■□□□□ 0.1
BRCA1-211ENST00000472490 EOMESO95936 686 aa15.7■□□□□ 0.1
BRCA1-211ENST00000472490 MYOGP15173 224 aa15.7■□□□□ 0.1
BRCA1-211ENST00000472490 STAT6P42226 847 aa15.7■□□□□ 0.1
BRCA1-211ENST00000472490 RAB27AP51159 221 aa15.7■□□□□ 0.1
BRCA1-211ENST00000472490 SMTNP53814 917 aa15.7■□□□□ 0.1
BRCA1-211ENST00000472490 FAM189BP81408 668 aa15.7■□□□□ 0.1
BRCA1-211ENST00000472490 MAPK6Q16659 721 aa15.7■□□□□ 0.1
BRCA1-211ENST00000472490 CDCA2Q69YH5 1023 aaPredicted RBP15.7■□□□□ 0.1
BRCA1-211ENST00000472490 RSPH1Q8WYR4 309 aa15.7■□□□□ 0.1
BRCA1-211ENST00000472490 CCDC51Q96ER9 411 aa15.7■□□□□ 0.1
BRCA1-211ENST00000472490 SPATA32Q96LK8 384 aa15.7■□□□□ 0.1
BRCA1-211ENST00000472490 PYM1Q9BRP8 204 aaKnown RBP15.7■□□□□ 0.1
BRCA1-211ENST00000472490 RUSC1Q9BVN2 902 aa15.7■□□□□ 0.1
BRCA1-211ENST00000472490 SEMA6BQ9H3T3 888 aa15.7■□□□□ 0.1
BRCA1-211ENST00000472490 BLOC1S4Q9NUP1 217 aa15.7■□□□□ 0.1
BRCA1-211ENST00000472490 PRMT7Q9NVM4 692 aaPredicted RBP15.7■□□□□ 0.1
BRCA1-211ENST00000472490 FAM13BQ9NYF5 915 aa15.7■□□□□ 0.1
BRCA1-211ENST00000472490 LARSQ9P2J5 1176 aaKnown RBP15.7■□□□□ 0.1
BRCA1-211ENST00000472490 ODF2LQ9ULJ1 636 aa15.7■□□□□ 0.1
BRCA1-211ENST00000472490 RBM19Q9Y4C8 960 aaKnown RBP15.7■□□□□ 0.1
BRCA1-211ENST00000472490 KRT18P05783 430 aaKnown RBP15.69■□□□□ 0.1
BRCA1-211ENST00000472490 SCP2P22307 547 aa15.69■□□□□ 0.1
BRCA1-211ENST00000472490 MBTD1Q05BQ5 628 aa15.69■□□□□ 0.1
BRCA1-211ENST00000472490 DHX8Q14562 1220 aaKnown RBP15.69■□□□□ 0.1
BRCA1-211ENST00000472490 NOTUMQ6P988 496 aa15.69■□□□□ 0.1
BRCA1-211ENST00000472490 USP49Q70CQ1 688 aa15.69■□□□□ 0.1
BRCA1-211ENST00000472490 GPBP1Q86WP2 473 aa15.69■□□□□ 0.1
BRCA1-211ENST00000472490 LRRC27Q9C0I9 530 aa15.69■□□□□ 0.1
BRCA1-211ENST00000472490 CUEDC2Q9H467 287 aa15.69■□□□□ 0.1
BRCA1-211ENST00000472490 MINDY3Q9H8M7 445 aa15.69■□□□□ 0.1
BRCA1-211ENST00000472490 CIZ1Q9ULV3 898 aaPredicted RBP15.69■□□□□ 0.1
BRCA1-211ENST00000472490 WDR81Q562E7 1941 aa15.68■□□□□ 0.1
BRCA1-211ENST00000472490 CCDC169A6NNP5 214 aa15.68■□□□□ 0.1
BRCA1-211ENST00000472490 H0YCG3 227 aa15.68■□□□□ 0.1
BRCA1-211ENST00000472490 PLS3P13797 630 aa15.68■□□□□ 0.1
BRCA1-211ENST00000472490 ABCD1P33897 745 aa15.68■□□□□ 0.1
BRCA1-211ENST00000472490 PEX3P56589 373 aa15.68■□□□□ 0.1
BRCA1-211ENST00000472490 MCM6Q14566 821 aa15.68■□□□□ 0.1
BRCA1-211ENST00000472490 FAM187BQ17R55 369 aa15.68■□□□□ 0.1
BRCA1-211ENST00000472490 SV2BQ7L1I2 683 aa15.68■□□□□ 0.1
BRCA1-211ENST00000472490 ECHDC2Q86YB7 292 aa15.68■□□□□ 0.1
BRCA1-211ENST00000472490 ABI1Q8IZP0 508 aa15.68■□□□□ 0.1
BRCA1-211ENST00000472490 CRIPAKQ8N1N5 446 aa15.68■□□□□ 0.1
BRCA1-211ENST00000472490 IQUBQ8NA54 791 aa15.68■□□□□ 0.1
BRCA1-211ENST00000472490 CNNM3Q8NE01 707 aa15.68■□□□□ 0.1
BRCA1-211ENST00000472490 SP7Q8TDD2 431 aaPredicted RBP15.68■□□□□ 0.1
BRCA1-211ENST00000472490 PGBD4Q96DM1 585 aa15.68■□□□□ 0.1
BRCA1-211ENST00000472490 SAMD11Q96NU1 681 aa15.68■□□□□ 0.1
BRCA1-211ENST00000472490 KMT5AQ9NQR1 393 aa15.68■□□□□ 0.1
BRCA1-211ENST00000472490 FAM105AQ9NUU6 356 aa15.68■□□□□ 0.1
BRCA1-211ENST00000472490 PCDHA7Q9UN72 937 aa15.68■□□□□ 0.1
BRCA1-211ENST00000472490 RWDD3Q9Y3V2 267 aa15.68■□□□□ 0.1
BRCA1-211ENST00000472490 LAMA3Q16787 3333 aa15.68■□□□□ 0.1
BRCA1-211ENST00000472490 ADGRA3Q8IWK6 1321 aa15.68■□□□□ 0.1
BRCA1-211ENST00000472490 K7ERI5 159 aa15.67■□□□□ 0.1
BRCA1-211ENST00000472490 TSPAN1O60635 241 aa15.67■□□□□ 0.1
BRCA1-211ENST00000472490 TBCAO75347 108 aaKnown RBP15.67■□□□□ 0.1
BRCA1-211ENST00000472490 IBSPP21815 317 aaPredicted RBP15.67■□□□□ 0.1
BRCA1-211ENST00000472490 NPTX2P47972 431 aa15.67■□□□□ 0.1
BRCA1-211ENST00000472490 AMPD3Q01432 767 aa15.67■□□□□ 0.1
BRCA1-211ENST00000472490 TAP1Q03518 808 aa15.67■□□□□ 0.1
BRCA1-211ENST00000472490 RAD51AP2Q09MP3 1159 aa15.67■□□□□ 0.1
BRCA1-211ENST00000472490 BTG3Q14201 252 aaPredicted RBP15.67■□□□□ 0.1
BRCA1-211ENST00000472490 TMEM132AQ24JP5 1023 aa15.67■□□□□ 0.1
BRCA1-211ENST00000472490 AXDND1Q5T1B0 1012 aaPredicted RBP15.67■□□□□ 0.1
BRCA1-211ENST00000472490 SHC4Q6S5L8 630 aa15.67■□□□□ 0.1
BRCA1-211ENST00000472490 APBB1IPQ7Z5R6 666 aaPredicted RBP15.67■□□□□ 0.1
BRCA1-211ENST00000472490 CMTR2Q8IYT2 770 aaKnown RBP15.67■□□□□ 0.1
BRCA1-211ENST00000472490 HACE1Q8IYU2 909 aa15.67■□□□□ 0.1
BRCA1-211ENST00000472490 FIBCD1Q8N539 461 aa15.67■□□□□ 0.1
BRCA1-211ENST00000472490 LEO1Q8WVC0 666 aaPredicted RBP15.67■□□□□ 0.1
BRCA1-211ENST00000472490 SPIRE2Q8WWL2 714 aa15.67■□□□□ 0.1
BRCA1-211ENST00000472490 BSNDQ8WZ55 320 aa15.67■□□□□ 0.1
BRCA1-211ENST00000472490 ZNF689Q96CS4 500 aaPredicted RBP15.67■□□□□ 0.1
BRCA1-211ENST00000472490 FAM161BQ96MY7 647 aa15.67■□□□□ 0.1
BRCA1-211ENST00000472490 TGS1Q96RS0 853 aaKnown RBP15.67■□□□□ 0.1
BRCA1-211ENST00000472490 NTPCRQ9BSD7 190 aaKnown RBP15.67■□□□□ 0.1
BRCA1-211ENST00000472490 TRIM6Q9C030 488 aaPredicted RBP15.67■□□□□ 0.1
BRCA1-211ENST00000472490 TTYH1Q9H313 450 aaPredicted RBP15.67■□□□□ 0.1
BRCA1-211ENST00000472490 FZD8Q9H461 694 aa15.67■□□□□ 0.1
BRCA1-211ENST00000472490 PARVGQ9HBI0 331 aa15.67■□□□□ 0.1
BRCA1-211ENST00000472490 MTMR10Q9NXD2 777 aa15.67■□□□□ 0.1
BRCA1-211ENST00000472490 SIP14410 1827 aa15.66■□□□□ 0.1
BRCA1-211ENST00000472490 LINC01553A4QN01 128 aa15.66■□□□□ 0.1
BRCA1-211ENST00000472490 ACKR2O00590 384 aa15.66■□□□□ 0.1
BRCA1-211ENST00000472490 ZNF623O75123 536 aa15.66■□□□□ 0.1
BRCA1-211ENST00000472490 FAM13AO94988 1023 aa15.66■□□□□ 0.1
BRCA1-211ENST00000472490 HOXA11P31270 313 aaPredicted RBP15.66■□□□□ 0.1
BRCA1-211ENST00000472490 MAPK7Q13164 816 aa15.66■□□□□ 0.1
BRCA1-211ENST00000472490 PRPF4BQ13523 1007 aaKnown RBP15.66■□□□□ 0.1
BRCA1-211ENST00000472490 ARSHQ5FYA8 562 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms