RNA–Protein interactions for RNA: ENST00000469778.1

SPTLC1-204, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 2

Gene SPTLC1, Length 490 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-204ENST00000469778 LRRC15Q8TF66 581 aa13.94□□□□□ -0.18
SPTLC1-204ENST00000469778 EVPLQ92817 2033 aa13.94□□□□□ -0.18
SPTLC1-204ENST00000469778 CCDC47Q96A33 483 aaKnown RBP13.94□□□□□ -0.18
SPTLC1-204ENST00000469778 DNAJC19Q96DA6 116 aa13.94□□□□□ -0.18
SPTLC1-204ENST00000469778 PAGE5Q96GU1 130 aa13.94□□□□□ -0.18
SPTLC1-204ENST00000469778 TRIM9Q9C026 710 aa13.94□□□□□ -0.18
SPTLC1-204ENST00000469778 ST6GALNAC4Q9H4F1 302 aa13.94□□□□□ -0.18
SPTLC1-204ENST00000469778 CDHR5Q9HBB8 845 aa13.94□□□□□ -0.18
SPTLC1-204ENST00000469778 ERVK-5Q9HDB9 667 aa13.94□□□□□ -0.18
SPTLC1-204ENST00000469778 GPRC5CQ9NQ84 441 aa13.94□□□□□ -0.18
SPTLC1-204ENST00000469778 KMT5AQ9NQR1 393 aa13.94□□□□□ -0.18
SPTLC1-204ENST00000469778 OLFML3Q9NRN5 406 aa13.94□□□□□ -0.18
SPTLC1-204ENST00000469778 C1orf112Q9NSG2 853 aa13.94□□□□□ -0.18
SPTLC1-204ENST00000469778 ST3GAL5Q9UNP4 418 aa13.94□□□□□ -0.18
SPTLC1-204ENST00000469778 NOC2LQ9Y3T9 749 aaKnown RBP13.94□□□□□ -0.18
SPTLC1-204ENST00000469778 FRMD3A2A2Y4 597 aa13.93□□□□□ -0.18
SPTLC1-204ENST00000469778 CCDC169A6NNP5 214 aa13.93□□□□□ -0.18
SPTLC1-204ENST00000469778 GTPBP6O43824 516 aaPredicted RBP13.93□□□□□ -0.18
SPTLC1-204ENST00000469778 TRAK2O60296 914 aa13.93□□□□□ -0.18
SPTLC1-204ENST00000469778 KINO60870 393 aaKnown RBP13.93□□□□□ -0.18
SPTLC1-204ENST00000469778 ERLIN2O94905 339 aa13.93□□□□□ -0.18
SPTLC1-204ENST00000469778 NFX1Q12986 1120 aaKnown RBP13.93□□□□□ -0.18
SPTLC1-204ENST00000469778 PSMD2Q13200 908 aa13.93□□□□□ -0.18
SPTLC1-204ENST00000469778 SNW1Q13573 536 aaKnown RBP13.93□□□□□ -0.18
SPTLC1-204ENST00000469778 TMEM240Q5SV17 173 aa13.93□□□□□ -0.18
SPTLC1-204ENST00000469778 PPP4R3CPQ6ZMV5 832 aa13.93□□□□□ -0.18
SPTLC1-204ENST00000469778 ZNF365Q70YC5 407 aa13.93□□□□□ -0.18
SPTLC1-204ENST00000469778 C16orf59Q7L2K0 433 aa13.93□□□□□ -0.18
SPTLC1-204ENST00000469778 APBB1IPQ7Z5R6 666 aaPredicted RBP13.93□□□□□ -0.18
SPTLC1-204ENST00000469778 DEFB128Q7Z7B8 93 aa13.93□□□□□ -0.18
SPTLC1-204ENST00000469778 RSPH1Q8WYR4 309 aa13.93□□□□□ -0.18
SPTLC1-204ENST00000469778 FZD8Q9H461 694 aa13.93□□□□□ -0.18
SPTLC1-204ENST00000469778 AGO3Q9H9G7 860 aaKnown RBP13.93□□□□□ -0.18
SPTLC1-204ENST00000469778 ARHGAP28Q9P2N2 729 aa13.93□□□□□ -0.18
SPTLC1-204ENST00000469778 SERTAD1Q9UHV2 236 aa13.93□□□□□ -0.18
SPTLC1-204ENST00000469778 ARID2Q68CP9 1835 aa13.92□□□□□ -0.18
SPTLC1-204ENST00000469778 INO80B-WBP1J3KQ70 363 aa13.92□□□□□ -0.18
SPTLC1-204ENST00000469778 ACKR2O00590 384 aa13.92□□□□□ -0.18
SPTLC1-204ENST00000469778 PTMSP20962 102 aa13.92□□□□□ -0.18
SPTLC1-204ENST00000469778 CD52P31358 61 aa13.92□□□□□ -0.18
SPTLC1-204ENST00000469778 STRN3Q13033 797 aa13.92□□□□□ -0.18
SPTLC1-204ENST00000469778 HERC4Q5GLZ8 1057 aaPredicted RBP13.92□□□□□ -0.18
SPTLC1-204ENST00000469778 RASIP1Q5U651 963 aa13.92□□□□□ -0.18
SPTLC1-204ENST00000469778 UNC13DQ70J99 1090 aa13.92□□□□□ -0.18
SPTLC1-204ENST00000469778 DYMQ7RTS9 669 aa13.92□□□□□ -0.18
SPTLC1-204ENST00000469778 CATSPER4Q7RTX7 472 aa13.92□□□□□ -0.18
SPTLC1-204ENST00000469778 FAM228AQ86W67 206 aa13.92□□□□□ -0.18
SPTLC1-204ENST00000469778 FAM178BQ8IXR5 827 aa13.92□□□□□ -0.18
SPTLC1-204ENST00000469778 TMEM40Q8WWA1 233 aa13.92□□□□□ -0.18
SPTLC1-204ENST00000469778 BSNDQ8WZ55 320 aa13.92□□□□□ -0.18
SPTLC1-204ENST00000469778 HVCN1Q96D96 273 aa13.92□□□□□ -0.18
SPTLC1-204ENST00000469778 VWCEQ96DN2 955 aa13.92□□□□□ -0.18
SPTLC1-204ENST00000469778 TSPYL2Q9H2G4 693 aaPredicted RBP13.92□□□□□ -0.18
SPTLC1-204ENST00000469778 GOLPH3LQ9H4A5 285 aa13.92□□□□□ -0.18
SPTLC1-204ENST00000469778 RGS18Q9NS28 235 aa13.92□□□□□ -0.18
SPTLC1-204ENST00000469778 PANK4Q9NVE7 773 aa13.92□□□□□ -0.18
SPTLC1-204ENST00000469778 PCDHB13Q9Y5F0 798 aa13.92□□□□□ -0.18
SPTLC1-204ENST00000469778 SFI1A8K8P3 1242 aa13.91□□□□□ -0.18
SPTLC1-204ENST00000469778 ENPP3O14638 875 aa13.91□□□□□ -0.18
SPTLC1-204ENST00000469778 SMC2O95347 1197 aa13.91□□□□□ -0.18
SPTLC1-204ENST00000469778 AMHP03971 560 aa13.91□□□□□ -0.18
SPTLC1-204ENST00000469778 IDEP14735 1019 aa13.91□□□□□ -0.18
SPTLC1-204ENST00000469778 KCNJ6P48051 423 aa13.91□□□□□ -0.18
SPTLC1-204ENST00000469778 RAB27AP51159 221 aa13.91□□□□□ -0.18
SPTLC1-204ENST00000469778 NCKAP1LP55160 1127 aa13.91□□□□□ -0.18
SPTLC1-204ENST00000469778 ASIC1P78348 528 aa13.91□□□□□ -0.18
SPTLC1-204ENST00000469778 FAM189BP81408 668 aa13.91□□□□□ -0.18
SPTLC1-204ENST00000469778 MBTD1Q05BQ5 628 aa13.91□□□□□ -0.18
SPTLC1-204ENST00000469778 SLC24A5Q71RS6 500 aa13.91□□□□□ -0.18
SPTLC1-204ENST00000469778 ZNF720Q7Z2F6 126 aa13.91□□□□□ -0.18
SPTLC1-204ENST00000469778 HAUS6Q7Z4H7 955 aa13.91□□□□□ -0.18
SPTLC1-204ENST00000469778 TMEM161BQ8NDZ6 487 aa13.91□□□□□ -0.18
SPTLC1-204ENST00000469778 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.91□□□□□ -0.181e-6■■■□□ 17.6
SPTLC1-204ENST00000469778 PRO3102Q9H379 93 aa13.91□□□□□ -0.18
SPTLC1-204ENST00000469778 ZHX3Q9H4I2 956 aa13.91□□□□□ -0.18
SPTLC1-204ENST00000469778 AGPAT5Q9NUQ2 364 aa13.91□□□□□ -0.18
SPTLC1-204ENST00000469778 CEP290O15078 2479 aa13.9□□□□□ -0.18
SPTLC1-204ENST00000469778 NPHP3-ACAD11A0A0J9YXS1 232 aa13.9□□□□□ -0.18
SPTLC1-204ENST00000469778 A0A1B0GUA9 196 aa13.9□□□□□ -0.18
SPTLC1-204ENST00000469778 DENND3A2RUS2 1198 aa13.9□□□□□ -0.18
SPTLC1-204ENST00000469778 ZNF623O75123 536 aa13.9□□□□□ -0.18
SPTLC1-204ENST00000469778 KIF20AO95235 890 aa13.9□□□□□ -0.18
SPTLC1-204ENST00000469778 EOMESO95936 686 aa13.9□□□□□ -0.18
SPTLC1-204ENST00000469778 STAG3L1P0CL83 205 aa13.9□□□□□ -0.18
SPTLC1-204ENST00000469778 ACRP10323 421 aa13.9□□□□□ -0.18
SPTLC1-204ENST00000469778 AFMP43652 599 aa13.9□□□□□ -0.18
SPTLC1-204ENST00000469778 EPHB4P54760 987 aa13.9□□□□□ -0.18
SPTLC1-204ENST00000469778 GTF2BQ00403 316 aa13.9□□□□□ -0.18
SPTLC1-204ENST00000469778 RAD51AP2Q09MP3 1159 aa13.9□□□□□ -0.18
SPTLC1-204ENST00000469778 PRPF4BQ13523 1007 aaKnown RBP13.9□□□□□ -0.18
SPTLC1-204ENST00000469778 DSC3Q14574 896 aa13.9□□□□□ -0.18
SPTLC1-204ENST00000469778 NOTUMQ6P988 496 aa13.9□□□□□ -0.18
SPTLC1-204ENST00000469778 ZPBP2Q6X784 338 aa13.9□□□□□ -0.18
SPTLC1-204ENST00000469778 TDHQ8IZJ6 230 aa13.9□□□□□ -0.18
SPTLC1-204ENST00000469778 GSDMAQ96QA5 445 aa13.9□□□□□ -0.18
SPTLC1-204ENST00000469778 PPP1R16BQ96T49 567 aa13.9□□□□□ -0.18
SPTLC1-204ENST00000469778 SLC9A7Q96T83 725 aa13.9□□□□□ -0.18
SPTLC1-204ENST00000469778 CCDC113Q9H0I3 377 aa13.9□□□□□ -0.18
SPTLC1-204ENST00000469778 ELAC1Q9H777 363 aaKnown RBP13.9□□□□□ -0.18
SPTLC1-204ENST00000469778 MRPL44Q9H9J2 332 aaKnown RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms