RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 ATG2AQ2TAZ0 1938 aa19.57■□□□□ 0.72
COL7A1-206ENST00000466591 BDP1A6H8Y1 2624 aa19.56■□□□□ 0.72
COL7A1-206ENST00000466591 SPDYE4A6NLX3 237 aa19.56■□□□□ 0.72
COL7A1-206ENST00000466591 NEMFO60524 1076 aa19.56■□□□□ 0.72
COL7A1-206ENST00000466591 STBD1O95210 358 aa19.56■□□□□ 0.72
COL7A1-206ENST00000466591 CTDNEP1O95476 244 aa19.56■□□□□ 0.72
COL7A1-206ENST00000466591 EMC2Q15006 297 aa19.56■□□□□ 0.72
COL7A1-206ENST00000466591 DUSP6Q16828 381 aa19.56■□□□□ 0.72
COL7A1-206ENST00000466591 LRRC55Q6ZSA7 311 aa19.56■□□□□ 0.72
COL7A1-206ENST00000466591 C4orf19Q8IY42 314 aa19.56■□□□□ 0.72
COL7A1-206ENST00000466591 DIS3L2Q8IYB7 885 aaKnown RBP19.56■□□□□ 0.72
COL7A1-206ENST00000466591 PRPF31Q8WWY3 499 aaKnown RBP19.56■□□□□ 0.72
COL7A1-206ENST00000466591 LPPQ93052 612 aa19.56■□□□□ 0.72
COL7A1-206ENST00000466591 FAM105AQ9NUU6 356 aa19.56■□□□□ 0.72
COL7A1-206ENST00000466591 MYO7AQ13402 2215 aa19.56■□□□□ 0.72
COL7A1-206ENST00000466591 ATP2B1P20020 1258 aa19.55■□□□□ 0.72
COL7A1-206ENST00000466591 TECP42680 631 aa19.55■□□□□ 0.72
COL7A1-206ENST00000466591 TXKP42681 527 aa19.55■□□□□ 0.72
COL7A1-206ENST00000466591 BCAR1P56945 870 aa19.55■□□□□ 0.72
COL7A1-206ENST00000466591 COASYQ13057 564 aa19.55■□□□□ 0.72
COL7A1-206ENST00000466591 TFDP1Q14186 410 aa19.55■□□□□ 0.72
COL7A1-206ENST00000466591 RNF149Q8NC42 400 aa19.55■□□□□ 0.72
COL7A1-206ENST00000466591 SMRP1Q8NCR6 262 aa19.55■□□□□ 0.72
COL7A1-206ENST00000466591 MSLNLQ96KJ4 702 aa19.55■□□□□ 0.72
COL7A1-206ENST00000466591 CLEC1BQ9P126 229 aa19.55■□□□□ 0.72
COL7A1-206ENST00000466591 USP15Q9Y4E8 981 aaPredicted RBP19.55■□□□□ 0.72
COL7A1-206ENST00000466591 FAM205CA6NFA0 338 aa19.54■□□□□ 0.72
COL7A1-206ENST00000466591 PRR33A8MZF0 331 aa19.54■□□□□ 0.72
COL7A1-206ENST00000466591 NT5C1B-RDH14C9J2C7 533 aa19.54■□□□□ 0.72
COL7A1-206ENST00000466591 ASAP2O43150 1006 aa19.54■□□□□ 0.72
COL7A1-206ENST00000466591 LARGE1O95461 756 aa19.54■□□□□ 0.72
COL7A1-206ENST00000466591 LAMTOR4Q0VGL1 99 aa19.54■□□□□ 0.72
COL7A1-206ENST00000466591 NOMO2Q5JPE7 1267 aa19.54■□□□□ 0.72
COL7A1-206ENST00000466591 SRGAP1Q7Z6B7 1085 aa19.54■□□□□ 0.72
COL7A1-206ENST00000466591 NSUN7Q8NE18 718 aaKnown RBP19.54■□□□□ 0.72
COL7A1-206ENST00000466591 HAS1Q92839 578 aa19.54■□□□□ 0.72
COL7A1-206ENST00000466591 RPGRIP1Q96KN7 1286 aa19.54■□□□□ 0.72
COL7A1-206ENST00000466591 APOL5Q9BWW9 433 aa19.54■□□□□ 0.72
COL7A1-206ENST00000466591 TTC12Q9H892 705 aaPredicted RBP19.54■□□□□ 0.72
COL7A1-206ENST00000466591 AGPAT5Q9NUQ2 364 aa19.54■□□□□ 0.72
COL7A1-206ENST00000466591 RNF19AQ9NV58 838 aa19.54■□□□□ 0.72
COL7A1-206ENST00000466591 MUTYHQ9UIF7 546 aa19.54■□□□□ 0.72
COL7A1-206ENST00000466591 C19orf67A6NJJ6 358 aa19.53■□□□□ 0.72
COL7A1-206ENST00000466591 BTBD18B2RXH4 712 aa19.53■□□□□ 0.72
COL7A1-206ENST00000466591 FSCN2O14926 492 aa19.53■□□□□ 0.72
COL7A1-206ENST00000466591 JAK2O60674 1132 aa19.53■□□□□ 0.72
COL7A1-206ENST00000466591 EYA4O95677 639 aa19.53■□□□□ 0.72
COL7A1-206ENST00000466591 FDPSP14324 419 aaKnown RBP19.53■□□□□ 0.72
COL7A1-206ENST00000466591 MXD4Q14582 209 aaPredicted RBP19.53■□□□□ 0.72
COL7A1-206ENST00000466591 EARS2Q5JPH6 523 aaKnown RBP19.53■□□□□ 0.72
COL7A1-206ENST00000466591 ZNF598Q86UK7 904 aaKnown RBP19.53■□□□□ 0.72
COL7A1-206ENST00000466591 RNF135Q8IUD6 432 aa19.53■□□□□ 0.72
COL7A1-206ENST00000466591 SLC39A11Q8N1S5 342 aa19.53■□□□□ 0.72
COL7A1-206ENST00000466591 CASP10Q92851 521 aa19.53■□□□□ 0.72
COL7A1-206ENST00000466591 CEP89Q96ST8 783 aa19.53■□□□□ 0.72
COL7A1-206ENST00000466591 EIF2AK1Q9BQI3 630 aaKnown RBP19.53■□□□□ 0.72
COL7A1-206ENST00000466591 TRIM6Q9C030 488 aaPredicted RBP19.53■□□□□ 0.72
COL7A1-206ENST00000466591 DHX33Q9H6R0 707 aaKnown RBP19.53■□□□□ 0.72
COL7A1-206ENST00000466591 PCDHB2Q9Y5E7 798 aa19.53■□□□□ 0.72
COL7A1-206ENST00000466591 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.52■□□□□ 0.72
COL7A1-206ENST00000466591 HIDE1A8MVS5 230 aa19.52■□□□□ 0.72
COL7A1-206ENST00000466591 CXCL14O95715 111 aa19.52■□□□□ 0.72
COL7A1-206ENST00000466591 GLP2RO95838 553 aa19.52■□□□□ 0.72
COL7A1-206ENST00000466591 ATF7P17544 494 aaPredicted RBP19.52■□□□□ 0.72
COL7A1-206ENST00000466591 PLA2G5P39877 138 aa19.52■□□□□ 0.72
COL7A1-206ENST00000466591 RBM10P98175 930 aaKnown RBP19.52■□□□□ 0.72
COL7A1-206ENST00000466591 GUCY1B3Q02153 619 aa19.52■□□□□ 0.72
COL7A1-206ENST00000466591 TPRNQ4KMQ1 711 aa19.52■□□□□ 0.72
COL7A1-206ENST00000466591 CES5AQ6NT32 575 aa19.52■□□□□ 0.72
COL7A1-206ENST00000466591 ZBTB33Q86T24 672 aa19.52■□□□□ 0.72
COL7A1-206ENST00000466591 HACE1Q8IYU2 909 aa19.52■□□□□ 0.72
COL7A1-206ENST00000466591 ZNF579Q8NAF0 562 aaKnown RBP19.52■□□□□ 0.72
COL7A1-206ENST00000466591 FAM184AQ8NB25 1140 aa19.52■□□□□ 0.72
COL7A1-206ENST00000466591 TRAIPQ9BWF2 469 aa19.52■□□□□ 0.72
COL7A1-206ENST00000466591 WRAP73Q9P2S5 460 aaPredicted RBP19.52■□□□□ 0.72
COL7A1-206ENST00000466591 INO80B-WBP1J3KQ70 363 aa19.51■□□□□ 0.71
COL7A1-206ENST00000466591 MCM7P33993 719 aa19.51■□□□□ 0.71
COL7A1-206ENST00000466591 TMEM132AQ24JP5 1023 aa19.51■□□□□ 0.71
COL7A1-206ENST00000466591 ANKRD54Q6NXT1 300 aa19.51■□□□□ 0.71
COL7A1-206ENST00000466591 FERMT3Q86UX7 667 aa19.51■□□□□ 0.71
COL7A1-206ENST00000466591 VPS52Q8N1B4 723 aa19.51■□□□□ 0.71
COL7A1-206ENST00000466591 C8orf76Q96K31 380 aa19.51■□□□□ 0.71
COL7A1-206ENST00000466591 PHF7Q9BWX1 381 aaPredicted RBP19.51■□□□□ 0.71
COL7A1-206ENST00000466591 RSAD1Q9HA92 442 aa19.51■□□□□ 0.71
COL7A1-206ENST00000466591 IFT122Q9HBG6 1241 aa19.51■□□□□ 0.71
COL7A1-206ENST00000466591 TSHZ2Q9NRE2 1034 aa19.51■□□□□ 0.71
COL7A1-206ENST00000466591 TBC1D13Q9NVG8 400 aa19.51■□□□□ 0.71
COL7A1-206ENST00000466591 LIMCH1Q9UPQ0 1083 aa19.51■□□□□ 0.71
COL7A1-206ENST00000466591 CNTNAP2Q9UHC6 1331 aa19.51■□□□□ 0.71
COL7A1-206ENST00000466591 DGAT1O75907 488 aa19.5■□□□□ 0.71
COL7A1-206ENST00000466591 SLITRK3O94933 977 aa19.5■□□□□ 0.71
COL7A1-206ENST00000466591 HOXB8P17481 243 aaPredicted RBP19.5■□□□□ 0.71
COL7A1-206ENST00000466591 GIT2Q14161 759 aa19.5■□□□□ 0.71
COL7A1-206ENST00000466591 CCDC83Q8IWF9 413 aa19.5■□□□□ 0.71
COL7A1-206ENST00000466591 CNNM3Q8NE01 707 aa19.5■□□□□ 0.71
COL7A1-206ENST00000466591 ERMNQ8TAM6 284 aa19.5■□□□□ 0.71
COL7A1-206ENST00000466591 C11orf16Q9NQ32 467 aa19.5■□□□□ 0.71
COL7A1-206ENST00000466591 KANSL3Q9P2N6 904 aa19.5■□□□□ 0.71
COL7A1-206ENST00000466591 ZNF623O75123 536 aa19.49■□□□□ 0.71
COL7A1-206ENST00000466591 NR1I2O75469 434 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms