RNA–Protein interactions for RNA: ENST00000465596.1

THBS3-205, Transcript of thrombospondin 3, humanhuman

TSL 5

Gene THBS3, Length 489 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-205ENST00000465596 SLC24A5Q71RS6 500 aa8.56□□□□□ -1.04
THBS3-205ENST00000465596 SRGAP1Q7Z6B7 1085 aa8.56□□□□□ -1.04
THBS3-205ENST00000465596 CABP7Q86V35 215 aa8.56□□□□□ -1.04
THBS3-205ENST00000465596 NPAS4Q8IUM7 802 aa8.56□□□□□ -1.04
THBS3-205ENST00000465596 EXOC8Q8IYI6 725 aa8.56□□□□□ -1.04
THBS3-205ENST00000465596 SYT2Q8N9I0 419 aaPredicted RBP8.56□□□□□ -1.04
THBS3-205ENST00000465596 RNF149Q8NC42 400 aa8.56□□□□□ -1.04
THBS3-205ENST00000465596 MCPH1Q8NEM0 835 aa8.56□□□□□ -1.04
THBS3-205ENST00000465596 NLRP7Q8WX94 980 aa8.56□□□□□ -1.04
THBS3-205ENST00000465596 SYMPKQ92797 1274 aaKnown RBP8.56□□□□□ -1.04
THBS3-205ENST00000465596 FIZ1Q96SL8 496 aa8.56□□□□□ -1.04
THBS3-205ENST00000465596 CDX2Q99626 313 aaPredicted RBP8.56□□□□□ -1.04
THBS3-205ENST00000465596 RAB34Q9BZG1 259 aa8.56□□□□□ -1.04
THBS3-205ENST00000465596 FZD8Q9H461 694 aa8.56□□□□□ -1.04
THBS3-205ENST00000465596 ELAC1Q9H777 363 aaKnown RBP8.56□□□□□ -1.04
THBS3-205ENST00000465596 HCSTQ9UBK5 93 aa8.56□□□□□ -1.04
THBS3-205ENST00000465596 INSL6Q9Y581 213 aa8.56□□□□□ -1.04
THBS3-205ENST00000465596 STK24Q9Y6E0 443 aa8.56□□□□□ -1.04
THBS3-205ENST00000465596 SCN1AP35498 2009 aa8.56□□□□□ -1.04
THBS3-205ENST00000465596 A0A0U1RQF3 1178 aa8.55□□□□□ -1.04
THBS3-205ENST00000465596 ARHGEF35A5YM69 484 aa8.55□□□□□ -1.04
THBS3-205ENST00000465596 ABLIM1O14639 778 aa8.55□□□□□ -1.04
THBS3-205ENST00000465596 B4GALT5O43286 388 aa8.55□□□□□ -1.04
THBS3-205ENST00000465596 B4GALT3O60512 393 aa8.55□□□□□ -1.04
THBS3-205ENST00000465596 ZNF623O75123 536 aa8.55□□□□□ -1.04
THBS3-205ENST00000465596 PPP6R2O75170 966 aa8.55□□□□□ -1.04
THBS3-205ENST00000465596 PDIA4P13667 645 aaKnown RBP8.55□□□□□ -1.04
THBS3-205ENST00000465596 POU3F3P20264 500 aaPredicted RBP8.55□□□□□ -1.04
THBS3-205ENST00000465596 ZNF131P52739 623 aa8.55□□□□□ -1.04
THBS3-205ENST00000465596 CEBPZQ03701 1054 aaKnown RBP8.55□□□□□ -1.04
THBS3-205ENST00000465596 FOXD4L5Q5VV16 416 aaPredicted RBP8.55□□□□□ -1.04
THBS3-205ENST00000465596 PPP2R2DQ66LE6 453 aa8.55□□□□□ -1.04
THBS3-205ENST00000465596 FAM117BQ6P1L5 589 aa8.55□□□□□ -1.04
THBS3-205ENST00000465596 SHC4Q6S5L8 630 aa8.55□□□□□ -1.04
THBS3-205ENST00000465596 ECHDC2Q86YB7 292 aa8.55□□□□□ -1.04
THBS3-205ENST00000465596 FOXD4L4Q8WXT5 416 aaPredicted RBP8.55□□□□□ -1.04
THBS3-205ENST00000465596 MYLIPQ8WY64 445 aa8.55□□□□□ -1.04
THBS3-205ENST00000465596 RAD54LQ92698 747 aa8.55□□□□□ -1.04
THBS3-205ENST00000465596 FAM161BQ96MY7 647 aa8.55□□□□□ -1.04
THBS3-205ENST00000465596 C17orf80Q9BSJ5 609 aa8.55□□□□□ -1.04
THBS3-205ENST00000465596 GCOM2Q9BZD3 368 aaPredicted RBP8.55□□□□□ -1.04
THBS3-205ENST00000465596 NT5C3AQ9H0P0 336 aa8.55□□□□□ -1.04
THBS3-205ENST00000465596 PRDM12Q9H4Q4 367 aa8.55□□□□□ -1.04
THBS3-205ENST00000465596 POLD4Q9HCU8 107 aa8.55□□□□□ -1.04
THBS3-205ENST00000465596 C1orf112Q9NSG2 853 aa8.55□□□□□ -1.04
THBS3-205ENST00000465596 TMEM161AQ9NX61 479 aa8.55□□□□□ -1.04
THBS3-205ENST00000465596 ARHGAP28Q9P2N2 729 aa8.55□□□□□ -1.04
THBS3-205ENST00000465596 TFIP11Q9UBB9 837 aaKnown RBP8.55□□□□□ -1.04
THBS3-205ENST00000465596 MSRAQ9UJ68 235 aa8.55□□□□□ -1.04
THBS3-205ENST00000465596 DNM3Q9UQ16 869 aa8.55□□□□□ -1.04
THBS3-205ENST00000465596 STXBP5LQ9Y2K9 1186 aa8.55□□□□□ -1.04
THBS3-205ENST00000465596 TCF20Q9UGU0 1960 aaKnown RBP8.55□□□□□ -1.04
THBS3-205ENST00000465596 CNTNAP2Q9UHC6 1331 aa8.54□□□□□ -1.04
THBS3-205ENST00000465596 NPHP3-ACAD11A0A0J9YXS1 232 aa8.54□□□□□ -1.04
THBS3-205ENST00000465596 C5orf67F2Z3F1 127 aa8.54□□□□□ -1.04
THBS3-205ENST00000465596 RFXAPO00287 272 aa8.54□□□□□ -1.04
THBS3-205ENST00000465596 INPPL1O15357 1258 aa8.54□□□□□ -1.04
THBS3-205ENST00000465596 HIP1RO75146 1068 aa8.54□□□□□ -1.04
THBS3-205ENST00000465596 UPP2O95045 317 aa8.54□□□□□ -1.04
THBS3-205ENST00000465596 PLA2G4BP0C869 781 aa8.54□□□□□ -1.04
THBS3-205ENST00000465596 SRGAP2CP0DJJ0 459 aa8.54□□□□□ -1.04
THBS3-205ENST00000465596 FGFR1P11362 822 aa8.54□□□□□ -1.04
THBS3-205ENST00000465596 ARF4P18085 180 aaPredicted RBP8.54□□□□□ -1.04
THBS3-205ENST00000465596 SFPQP23246 707 aaKnown RBP eCLIP8.54□□□□□ -1.04
THBS3-205ENST00000465596 NAMPTP43490 491 aa8.54□□□□□ -1.04
THBS3-205ENST00000465596 PHKA2P46019 1235 aa8.54□□□□□ -1.04
THBS3-205ENST00000465596 NPTX2P47972 431 aa8.54□□□□□ -1.04
THBS3-205ENST00000465596 DNM1Q05193 864 aaKnown RBP8.54□□□□□ -1.04
THBS3-205ENST00000465596 PCBP1Q15365 356 aaKnown RBP eCLIP8.54□□□□□ -1.04
THBS3-205ENST00000465596 FAM102BQ5T8I3 360 aa8.54□□□□□ -1.04
THBS3-205ENST00000465596 AGMOQ6ZNB7 445 aa8.54□□□□□ -1.04
THBS3-205ENST00000465596 LRRC55Q6ZSA7 311 aa8.54□□□□□ -1.04
THBS3-205ENST00000465596 MAEAQ7L5Y9 396 aa8.54□□□□□ -1.04
THBS3-205ENST00000465596 MRPL10Q7Z7H8 261 aaKnown RBP8.54□□□□□ -1.04
THBS3-205ENST00000465596 CMTR2Q8IYT2 770 aaKnown RBP8.54□□□□□ -1.04
THBS3-205ENST00000465596 KRI1Q8N9T8 703 aaKnown RBP8.54□□□□□ -1.04
THBS3-205ENST00000465596 SMG8Q8ND04 991 aaKnown RBP8.54□□□□□ -1.04
THBS3-205ENST00000465596 DNAJC19Q96DA6 116 aa8.54□□□□□ -1.04
THBS3-205ENST00000465596 CASD1Q96PB1 797 aa8.54□□□□□ -1.04
THBS3-205ENST00000465596 PLIN2Q99541 437 aa8.54□□□□□ -1.04
THBS3-205ENST00000465596 NTPCRQ9BSD7 190 aaKnown RBP8.54□□□□□ -1.04
THBS3-205ENST00000465596 KIFC3Q9BVG8 833 aa8.54□□□□□ -1.04
THBS3-205ENST00000465596 EIF2AQ9BY44 585 aaKnown RBP8.54□□□□□ -1.04
THBS3-205ENST00000465596 CWH43Q9H720 699 aa8.54□□□□□ -1.04
THBS3-205ENST00000465596 SLC28A3Q9HAS3 691 aa8.54□□□□□ -1.04
THBS3-205ENST00000465596 CHST12Q9NRB3 414 aa8.54□□□□□ -1.04
THBS3-205ENST00000465596 RCOR1Q9UKL0 485 aa8.54□□□□□ -1.04
THBS3-205ENST00000465596 MRPL42Q9Y6G3 142 aaKnown RBP8.54□□□□□ -1.04
THBS3-205ENST00000465596 DOCK6Q96HP0 2047 aa8.54□□□□□ -1.04
THBS3-205ENST00000465596 ZMYM2Q9UBW7 1377 aa8.53□□□□□ -1.04
THBS3-205ENST00000465596 A0A1B0GUA9 196 aa8.53□□□□□ -1.04
THBS3-205ENST00000465596 FRMD3A2A2Y4 597 aa8.53□□□□□ -1.04
THBS3-205ENST00000465596 DENND3A2RUS2 1198 aa8.53□□□□□ -1.04
THBS3-205ENST00000465596 SPTLC2O15270 562 aa8.53□□□□□ -1.04
THBS3-205ENST00000465596 MEFVO15553 781 aaPredicted RBP8.53□□□□□ -1.04
THBS3-205ENST00000465596 UBA7P41226 1012 aa8.53□□□□□ -1.04
THBS3-205ENST00000465596 AFF1P51825 1210 aaKnown RBP8.53□□□□□ -1.04
THBS3-205ENST00000465596 CAMK1Q14012 370 aa8.53□□□□□ -1.04
THBS3-205ENST00000465596 MCM6Q14566 821 aa8.53□□□□□ -1.04
THBS3-205ENST00000465596 EPC2Q52LR7 807 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms