RNA–Protein interactions for RNA: ENST00000465245.1

TRA2B-208, Transcript of transformer 2 beta homolog, human

TSL 3

Gene TRA2B, Length 634 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRA2B-208	ENST00000465245	PIN4	Q9Y237	131 aa	Known RBP	13.57	□□□□□ -0.24
TRA2B-208	ENST00000465245		R4GN57	208 aa		13.57	□□□□□ -0.24
TRA2B-208	ENST00000465245	CACNA1B	Q00975	2339 aa		13.57	□□□□□ -0.24
TRA2B-208	ENST00000465245	NCOR2	Q9Y618	2525 aa		13.56	□□□□□ -0.24
TRA2B-208	ENST00000465245	OTOGL	Q3ZCN5	2332 aa		13.56	□□□□□ -0.24
TRA2B-208	ENST00000465245	KRBA1	A5PL33	1030 aa		13.56	□□□□□ -0.24
TRA2B-208	ENST00000465245	GOLGA8A	A7E2F4	631 aa		13.56	□□□□□ -0.24
TRA2B-208	ENST00000465245	MEIS3P2	A8K0S8	358 aa		13.56	□□□□□ -0.24
TRA2B-208	ENST00000465245	GOLGA8B	A8MQT2	603 aa		13.56	□□□□□ -0.24
TRA2B-208	ENST00000465245	GBP2	P32456	591 aa	Predicted RBP	13.56	□□□□□ -0.24
TRA2B-208	ENST00000465245	DRP2	Q13474	957 aa		13.56	□□□□□ -0.24
TRA2B-208	ENST00000465245	NONO	Q15233	471 aa	Known RBP eCLIP	13.56	□□□□□ -0.24
TRA2B-208	ENST00000465245	UGCG	Q16739	394 aa		13.56	□□□□□ -0.24
TRA2B-208	ENST00000465245	REXO1	Q8N1G1	1221 aa	Known RBP	13.56	□□□□□ -0.24
TRA2B-208	ENST00000465245	RIN2	Q8WYP3	895 aa	Predicted RBP	13.56	□□□□□ -0.24
TRA2B-208	ENST00000465245	TRAIP	Q9BWF2	469 aa		13.56	□□□□□ -0.24
TRA2B-208	ENST00000465245	WNT16	Q9UBV4	365 aa		13.56	□□□□□ -0.24
TRA2B-208	ENST00000465245	STK39	Q9UEW8	545 aa		13.56	□□□□□ -0.24
TRA2B-208	ENST00000465245	CA14	Q9ULX7	337 aa		13.56	□□□□□ -0.24
TRA2B-208	ENST00000465245	TDRD15	B5MCY1	1934 aa	Known RBP	13.55	□□□□□ -0.24
TRA2B-208	ENST00000465245		A0A087WZ62	844 aa		13.55	□□□□□ -0.24
TRA2B-208	ENST00000465245	ADAMTS3	O15072	1205 aa		13.55	□□□□□ -0.24
TRA2B-208	ENST00000465245	CHMP2A	O43633	222 aa		13.55	□□□□□ -0.24
TRA2B-208	ENST00000465245	N4BP1	O75113	896 aa	Known RBP	13.55	□□□□□ -0.24
TRA2B-208	ENST00000465245	CNP	P09543	421 aa	Known RBP	13.55	□□□□□ -0.24
TRA2B-208	ENST00000465245	RAB27A	P51159	221 aa		13.55	□□□□□ -0.24
TRA2B-208	ENST00000465245	NECTIN1	Q15223	517 aa		13.55	□□□□□ -0.24
TRA2B-208	ENST00000465245	PFKFB3	Q16875	520 aa	Predicted RBP	13.55	□□□□□ -0.24
TRA2B-208	ENST00000465245	MTERF2	Q49AM1	385 aa		13.55	□□□□□ -0.24
TRA2B-208	ENST00000465245	SPECC1	Q5M775	1068 aa		13.55	□□□□□ -0.24
TRA2B-208	ENST00000465245	ZC3H14	Q6PJT7	736 aa	Known RBP	13.55	□□□□□ -0.24
TRA2B-208	ENST00000465245	URGCP	Q8TCY9	931 aa		13.55	□□□□□ -0.24
TRA2B-208	ENST00000465245	RSAD2	Q8WXG1	361 aa		13.55	□□□□□ -0.24
TRA2B-208	ENST00000465245	LENG9	Q96B70	501 aa		13.55	□□□□□ -0.24
TRA2B-208	ENST00000465245	TCEANC2	Q96MN5	208 aa		13.55	□□□□□ -0.24
TRA2B-208	ENST00000465245	YTHDC1	Q96MU7	727 aa	Known RBP	13.55	□□□□□ -0.24
TRA2B-208	ENST00000465245	FDXACB1	Q9BRP7	624 aa	Predicted RBP	13.55	□□□□□ -0.24
TRA2B-208	ENST00000465245	TBC1D17	Q9HA65	648 aa		13.55	□□□□□ -0.24
TRA2B-208	ENST00000465245	MAN1C1	Q9NR34	630 aa		13.55	□□□□□ -0.24
TRA2B-208	ENST00000465245	MRPL17	Q9NRX2	175 aa	Known RBP	13.55	□□□□□ -0.24
TRA2B-208	ENST00000465245	FAM105A	Q9NUU6	356 aa		13.55	□□□□□ -0.24
TRA2B-208	ENST00000465245	SEPT9	Q9UHD8	586 aa	Predicted RBP	13.55	□□□□□ -0.24
TRA2B-208	ENST00000465245	BRPF3	Q9ULD4	1205 aa		13.55	□□□□□ -0.24
TRA2B-208	ENST00000465245	MYH15	Q9Y2K3	1946 aa		13.54	□□□□□ -0.24
TRA2B-208	ENST00000465245	CCDC195	A0A1B0GUA6	201 aa		13.54	□□□□□ -0.24
TRA2B-208	ENST00000465245	ESYT2	A0FGR8	921 aa		13.54	□□□□□ -0.24
TRA2B-208	ENST00000465245	C2CD2L	O14523	706 aa		13.54	□□□□□ -0.24
TRA2B-208	ENST00000465245	B4GALT3	O60512	393 aa		13.54	□□□□□ -0.24
TRA2B-208	ENST00000465245	GAS7	O60861	476 aa		13.54	□□□□□ -0.24
TRA2B-208	ENST00000465245	OFD1	O75665	1012 aa		13.54	□□□□□ -0.24
TRA2B-208	ENST00000465245	SRF	P11831	508 aa		13.54	□□□□□ -0.24
TRA2B-208	ENST00000465245	CDC27	P30260	824 aa		13.54	□□□□□ -0.24
TRA2B-208	ENST00000465245	JAK3	P52333	1124 aa		13.54	□□□□□ -0.24
TRA2B-208	ENST00000465245	CDC42EP1	Q00587	391 aa		13.54	□□□□□ -0.24
TRA2B-208	ENST00000465245	PUM1	Q14671	1186 aa	Known RBP eCLIP	13.54	□□□□□ -0.24	4e-6	■□□□□ 8.5
TRA2B-208	ENST00000465245	TARBP2	Q15633	366 aa	Known RBP	13.54	□□□□□ -0.24
TRA2B-208	ENST00000465245	CATSPER4	Q7RTX7	472 aa		13.54	□□□□□ -0.24
TRA2B-208	ENST00000465245	ZNF410	Q86VK4	478 aa		13.54	□□□□□ -0.24
TRA2B-208	ENST00000465245	ZNF280B	Q86YH2	543 aa		13.54	□□□□□ -0.24
TRA2B-208	ENST00000465245	CMAS	Q8NFW8	434 aa	Predicted RBP	13.54	□□□□□ -0.24
TRA2B-208	ENST00000465245	CCDC12	Q8WUD4	166 aa	Predicted RBP	13.54	□□□□□ -0.24
TRA2B-208	ENST00000465245	STAM	Q92783	540 aa		13.54	□□□□□ -0.24
TRA2B-208	ENST00000465245	PGBD4	Q96DM1	585 aa		13.54	□□□□□ -0.24
TRA2B-208	ENST00000465245	INO80B	Q9C086	356 aa	Predicted RBP	13.54	□□□□□ -0.24
TRA2B-208	ENST00000465245	ZMYND12	Q9H0C1	365 aa		13.54	□□□□□ -0.24
TRA2B-208	ENST00000465245	C6orf50	Q9HD87	102 aa		13.54	□□□□□ -0.24
TRA2B-208	ENST00000465245	ANO2	Q9NQ90	1003 aa		13.54	□□□□□ -0.24
TRA2B-208	ENST00000465245	CLUH	O75153	1309 aa		13.54	□□□□□ -0.24
TRA2B-208	ENST00000465245	CACNA1I	Q9P0X4	2223 aa		13.54	□□□□□ -0.24
TRA2B-208	ENST00000465245	EPG5	Q9HCE0	2579 aa		13.53	□□□□□ -0.24
TRA2B-208	ENST00000465245	KLF18	A0A0U1RQI7	1052 aa		13.53	□□□□□ -0.24
TRA2B-208	ENST00000465245	MSH4	O15457	936 aa		13.53	□□□□□ -0.24
TRA2B-208	ENST00000465245	LILRB3	O75022	631 aa		13.53	□□□□□ -0.24
TRA2B-208	ENST00000465245	UROD	P06132	367 aa		13.53	□□□□□ -0.24
TRA2B-208	ENST00000465245	ADH1A	P07327	375 aa		13.53	□□□□□ -0.24
TRA2B-208	ENST00000465245	DCN	P07585	359 aa	Known RBP	13.53	□□□□□ -0.24
TRA2B-208	ENST00000465245	SFN	P31947	248 aa		13.53	□□□□□ -0.24
TRA2B-208	ENST00000465245	CIITA	P33076	1130 aa		13.53	□□□□□ -0.24
TRA2B-208	ENST00000465245	DNM2	P50570	870 aa		13.53	□□□□□ -0.24
TRA2B-208	ENST00000465245	AK2	P54819	239 aa		13.53	□□□□□ -0.24
TRA2B-208	ENST00000465245	ELMSAN1	Q6PJG2	1045 aa		13.53	□□□□□ -0.24
TRA2B-208	ENST00000465245	RHPN2	Q8IUC4	686 aa		13.53	□□□□□ -0.24
TRA2B-208	ENST00000465245	SLC44A3	Q8N4M1	653 aa		13.53	□□□□□ -0.24
TRA2B-208	ENST00000465245	FAM193B	Q96PV7	902 aa	Predicted RBP	13.53	□□□□□ -0.24
TRA2B-208	ENST00000465245	ESYT1	Q9BSJ8	1104 aa		13.53	□□□□□ -0.24
TRA2B-208	ENST00000465245	TEKT3	Q9BXF9	490 aa		13.53	□□□□□ -0.24
TRA2B-208	ENST00000465245	UNC45A	Q9H3U1	944 aa		13.53	□□□□□ -0.24
TRA2B-208	ENST00000465245	WDR6	Q9NNW5	1121 aa	Known RBP	13.53	□□□□□ -0.24
TRA2B-208	ENST00000465245	FAM217B	Q9NTX9	383 aa	Predicted RBP	13.53	□□□□□ -0.24
TRA2B-208	ENST00000465245	EPS15L1	Q9UBC2	864 aa		13.53	□□□□□ -0.24
TRA2B-208	ENST00000465245	DPP7	Q9UHL4	492 aa		13.53	□□□□□ -0.24
TRA2B-208	ENST00000465245	NAP1L2	Q9ULW6	460 aa	Predicted RBP	13.53	□□□□□ -0.24
TRA2B-208	ENST00000465245	PATJ	Q8NI35	1801 aa		13.53	□□□□□ -0.24
TRA2B-208	ENST00000465245	TMEM150B	A6NC51	233 aa		13.52	□□□□□ -0.25
TRA2B-208	ENST00000465245	INPPL1	O15357	1258 aa		13.52	□□□□□ -0.25
TRA2B-208	ENST00000465245	ZNF623	O75123	536 aa		13.52	□□□□□ -0.25
TRA2B-208	ENST00000465245	DDHD2	O94830	711 aa		13.52	□□□□□ -0.25
TRA2B-208	ENST00000465245	SOD2	P04179	222 aa		13.52	□□□□□ -0.25
TRA2B-208	ENST00000465245	ALDH2	P05091	517 aa		13.52	□□□□□ -0.25
TRA2B-208	ENST00000465245	GNA11	P29992	359 aa		13.52	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 155.4 ms