RNA–Protein interactions for RNA: ENST00000465132.1

CPSF4-209, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 927 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-209ENST00000465132 SMAD2Q15796 467 aaKnown RBP19.38■□□□□ 0.69
CPSF4-209ENST00000465132 CLUL1Q15846 466 aa19.38■□□□□ 0.69
CPSF4-209ENST00000465132 ATG2AQ2TAZ0 1938 aa19.38■□□□□ 0.69
CPSF4-209ENST00000465132 PAN2Q504Q3 1202 aaKnown RBP19.38■□□□□ 0.69
CPSF4-209ENST00000465132 HYIQ5T013 277 aa19.38■□□□□ 0.69
CPSF4-209ENST00000465132 SPPL3Q8TCT6 385 aa19.38■□□□□ 0.69
CPSF4-209ENST00000465132 LRRC27Q9C0I9 530 aa19.38■□□□□ 0.69
CPSF4-209ENST00000465132 CUEDC2Q9H467 287 aa19.38■□□□□ 0.69
CPSF4-209ENST00000465132 IGFLR1Q9H665 355 aa19.38■□□□□ 0.69
CPSF4-209ENST00000465132 MAGEB2O15479 319 aa19.37■□□□□ 0.69
CPSF4-209ENST00000465132 LINC01565O15544 149 aa19.37■□□□□ 0.69
CPSF4-209ENST00000465132 TBX10O75333 385 aa19.37■□□□□ 0.69
CPSF4-209ENST00000465132 PTMSP20962 102 aa19.37■□□□□ 0.69
CPSF4-209ENST00000465132 YWHABP31946 246 aaKnown RBP19.37■□□□□ 0.69
CPSF4-209ENST00000465132 ADAM15Q13444 863 aa19.37■□□□□ 0.69
CPSF4-209ENST00000465132 CTTNQ14247 550 aaKnown RBP19.37■□□□□ 0.69
CPSF4-209ENST00000465132 ZRSR1Q15695 479 aaKnown RBP19.37■□□□□ 0.69
CPSF4-209ENST00000465132 RRAGBQ5VZM2 374 aa19.37■□□□□ 0.69
CPSF4-209ENST00000465132 IQUBQ8NA54 791 aa19.37■□□□□ 0.69
CPSF4-209ENST00000465132 KLHL23Q8NBE8 558 aa19.37■□□□□ 0.69
CPSF4-209ENST00000465132 TMEM87AQ8NBN3 555 aa19.37■□□□□ 0.69
CPSF4-209ENST00000465132 CLIC6Q96NY7 704 aa19.37■□□□□ 0.69
CPSF4-209ENST00000465132 NIFKQ9BYG3 293 aaKnown RBP19.37■□□□□ 0.69
CPSF4-209ENST00000465132 RGL1Q9NZL6 768 aa19.37■□□□□ 0.69
CPSF4-209ENST00000465132 STK17AQ9UEE5 414 aa19.37■□□□□ 0.69
CPSF4-209ENST00000465132 USP25Q9UHP3 1055 aa19.37■□□□□ 0.69
CPSF4-209ENST00000465132 DBR1Q9UK59 544 aaKnown RBP19.37■□□□□ 0.69
CPSF4-209ENST00000465132 LRFN2Q9ULH4 789 aa19.37■□□□□ 0.69
CPSF4-209ENST00000465132 KIAA1024Q9UPX6 916 aa19.37■□□□□ 0.69
CPSF4-209ENST00000465132 MBTPS2O43462 519 aa19.36■□□□□ 0.69
CPSF4-209ENST00000465132 SPATA31C1P0DKV0 1188 aa19.36■□□□□ 0.69
CPSF4-209ENST00000465132 RFC5P40937 340 aa19.36■□□□□ 0.69
CPSF4-209ENST00000465132 GATMP50440 423 aa19.36■□□□□ 0.69
CPSF4-209ENST00000465132 NFX1Q12986 1120 aaKnown RBP19.36■□□□□ 0.69
CPSF4-209ENST00000465132 SMAD4Q13485 552 aaKnown RBP19.36■□□□□ 0.69
CPSF4-209ENST00000465132 AXDND1Q5T1B0 1012 aaPredicted RBP19.36■□□□□ 0.69
CPSF4-209ENST00000465132 RESP18Q5W5W9 173 aa19.36■□□□□ 0.69
CPSF4-209ENST00000465132 FAM43BQ6ZT52 329 aaPredicted RBP19.36■□□□□ 0.69
CPSF4-209ENST00000465132 KIAA0319LQ8IZA0 1049 aa19.36■□□□□ 0.69
CPSF4-209ENST00000465132 ZNF710Q8N1W2 664 aa19.36■□□□□ 0.69
CPSF4-209ENST00000465132 MRPS27Q92552 414 aaKnown RBP19.36■□□□□ 0.69
CPSF4-209ENST00000465132 PPP2R3CQ969Q6 453 aa19.36■□□□□ 0.69
CPSF4-209ENST00000465132 MAGEF1Q9HAY2 307 aa19.36■□□□□ 0.69
CPSF4-209ENST00000465132 ERVK-5Q9HDB9 667 aa19.36■□□□□ 0.69
CPSF4-209ENST00000465132 DDX19AQ9NUU7 478 aaKnown RBP19.36■□□□□ 0.69
CPSF4-209ENST00000465132 SEPT9Q9UHD8 586 aaPredicted RBP19.36■□□□□ 0.69
CPSF4-209ENST00000465132 ZBTB42B2RXF5 422 aa19.35■□□□□ 0.69
CPSF4-209ENST00000465132 GAS2O43903 313 aaKnown RBP19.35■□□□□ 0.69
CPSF4-209ENST00000465132 MGEA5O60502 916 aa19.35■□□□□ 0.69
CPSF4-209ENST00000465132 MED24O75448 989 aa19.35■□□□□ 0.69
CPSF4-209ENST00000465132 TMOD1P28289 359 aa19.35■□□□□ 0.69
CPSF4-209ENST00000465132 IRS1P35568 1242 aa19.35■□□□□ 0.69
CPSF4-209ENST00000465132 STAT6P42226 847 aa19.35■□□□□ 0.69
CPSF4-209ENST00000465132 SARSP49591 514 aaKnown RBP19.35■□□□□ 0.69
CPSF4-209ENST00000465132 DNM2P50570 870 aa19.35■□□□□ 0.69
CPSF4-209ENST00000465132 SLC7A3Q8WY07 619 aa19.35■□□□□ 0.69
CPSF4-209ENST00000465132 CEP170P1Q96L14 293 aa19.35■□□□□ 0.69
CPSF4-209ENST00000465132 CDHR5Q9HBB8 845 aa19.35■□□□□ 0.69
CPSF4-209ENST00000465132 KCND2Q9NZV8 630 aa19.35■□□□□ 0.69
CPSF4-209ENST00000465132 CD207Q9UJ71 328 aa19.35■□□□□ 0.69
CPSF4-209ENST00000465132 GINS2Q9Y248 185 aa19.35■□□□□ 0.69
CPSF4-209ENST00000465132 NOC2LQ9Y3T9 749 aaKnown RBP19.35■□□□□ 0.69
CPSF4-209ENST00000465132 ARHGEF35A5YM69 484 aa19.34■□□□□ 0.69
CPSF4-209ENST00000465132 RPS6KA5O75582 802 aa19.34■□□□□ 0.69
CPSF4-209ENST00000465132 EYA4O95677 639 aa19.34■□□□□ 0.69
CPSF4-209ENST00000465132 ATP4AP20648 1035 aa19.34■□□□□ 0.69
CPSF4-209ENST00000465132 UBE2HP62256 183 aa19.34■□□□□ 0.69
CPSF4-209ENST00000465132 AMPD3Q01432 767 aa19.34■□□□□ 0.69
CPSF4-209ENST00000465132 TBC1D8BQ0IIM8 1120 aa19.34■□□□□ 0.69
CPSF4-209ENST00000465132 XKR9Q5GH70 373 aa19.34■□□□□ 0.69
CPSF4-209ENST00000465132 ADGRD2Q7Z7M1 963 aa19.34■□□□□ 0.69
CPSF4-209ENST00000465132 POF1BQ8WVV4 589 aa19.34■□□□□ 0.69
CPSF4-209ENST00000465132 TMEM40Q8WWA1 233 aa19.34■□□□□ 0.69
CPSF4-209ENST00000465132 EPSTI1Q96J88 318 aa19.34■□□□□ 0.69
CPSF4-209ENST00000465132 POP1Q99575 1024 aaKnown RBP19.34■□□□□ 0.69
CPSF4-209ENST00000465132 MMTAG2Q9BU76 263 aaKnown RBP19.34■□□□□ 0.69
CPSF4-209ENST00000465132 GDPD2Q9HCC8 539 aa19.34■□□□□ 0.69
CPSF4-209ENST00000465132 BMP2KQ9NSY1 1161 aaPredicted RBP19.34■□□□□ 0.69
CPSF4-209ENST00000465132 KCNG1Q9UIX4 513 aa19.34■□□□□ 0.69
CPSF4-209ENST00000465132 KCNH3Q9ULD8 1083 aa19.34■□□□□ 0.69
CPSF4-209ENST00000465132 PCDHB7Q9Y5E2 793 aa19.34■□□□□ 0.69
CPSF4-209ENST00000465132 PP2D1A8MPX8 630 aa19.33■□□□□ 0.68
CPSF4-209ENST00000465132 ZNF862O60290 1169 aa19.33■□□□□ 0.68
CPSF4-209ENST00000465132 DGAT1O75907 488 aa19.33■□□□□ 0.68
CPSF4-209ENST00000465132 IBSPP21815 317 aaPredicted RBP19.33■□□□□ 0.68
CPSF4-209ENST00000465132 CDC25AP30304 524 aa19.33■□□□□ 0.68
CPSF4-209ENST00000465132 NDUFV1P49821 464 aa19.33■□□□□ 0.68
CPSF4-209ENST00000465132 CDC42EP1Q00587 391 aa19.33■□□□□ 0.68
CPSF4-209ENST00000465132 GRIN1Q05586 938 aa19.33■□□□□ 0.68
CPSF4-209ENST00000465132 UGCGQ16739 394 aa19.33■□□□□ 0.68
CPSF4-209ENST00000465132 KANK3Q6NY19 840 aa19.33■□□□□ 0.68
CPSF4-209ENST00000465132 POTEGQ6S5H5 508 aa19.33■□□□□ 0.68
CPSF4-209ENST00000465132 SHC4Q6S5L8 630 aa19.33■□□□□ 0.68
CPSF4-209ENST00000465132 CEP57L1Q8IYX8 460 aa19.33■□□□□ 0.68
CPSF4-209ENST00000465132 EFHBQ8N7U6 833 aa19.33■□□□□ 0.68
CPSF4-209ENST00000465132 MSLNLQ96KJ4 702 aa19.33■□□□□ 0.68
CPSF4-209ENST00000465132 ADAM2Q99965 735 aa19.33■□□□□ 0.68
CPSF4-209ENST00000465132 TIPINQ9BVW5 301 aa19.33■□□□□ 0.68
CPSF4-209ENST00000465132 CYP26B1Q9NR63 512 aa19.33■□□□□ 0.68
CPSF4-209ENST00000465132 RGS18Q9NS28 235 aa19.33■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms