RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 ADGRF4Q8IZF3 695 aa10.83□□□□□ -0.68
APP-213ENST00000464867 MAML2Q8IZL2 1156 aaPredicted RBP10.83□□□□□ -0.68
APP-213ENST00000464867 LRRC43Q8N309 656 aa10.83□□□□□ -0.68
APP-213ENST00000464867 GIMAP8Q8ND71 665 aaPredicted RBP10.83□□□□□ -0.68
APP-213ENST00000464867 GPR152Q8TDT2 470 aa10.83□□□□□ -0.68
APP-213ENST00000464867 AMNQ9BXJ7 453 aa10.83□□□□□ -0.68
APP-213ENST00000464867 TMEM117Q9H0C3 514 aa10.83□□□□□ -0.68
APP-213ENST00000464867 CPVLQ9H3G5 476 aa10.83□□□□□ -0.68
APP-213ENST00000464867 BCAS3Q9H6U6 928 aa10.83□□□□□ -0.68
APP-213ENST00000464867 VAT1LQ9HCJ6 419 aa10.83□□□□□ -0.68
APP-213ENST00000464867 RGS18Q9NS28 235 aa10.83□□□□□ -0.68
APP-213ENST00000464867 TMEM161AQ9NX61 479 aa10.83□□□□□ -0.68
APP-213ENST00000464867 SPATA31C2B4DYI2 1134 aa10.82□□□□□ -0.68
APP-213ENST00000464867 FIBPO43427 364 aa10.82□□□□□ -0.68
APP-213ENST00000464867 FOXD2O60548 495 aaPredicted RBP10.82□□□□□ -0.68
APP-213ENST00000464867 FGFR1P11362 822 aa10.82□□□□□ -0.68
APP-213ENST00000464867 EPCAMP16422 314 aa10.82□□□□□ -0.68
APP-213ENST00000464867 TGM1P22735 817 aa10.82□□□□□ -0.68
APP-213ENST00000464867 FSHRP23945 695 aa10.82□□□□□ -0.68
APP-213ENST00000464867 MARK3P27448 753 aa10.82□□□□□ -0.68
APP-213ENST00000464867 PMLP29590 882 aa10.82□□□□□ -0.68
APP-213ENST00000464867 TCF7P36402 384 aaPredicted RBP10.82□□□□□ -0.68
APP-213ENST00000464867 TMEM266Q2M3C6 531 aa10.82□□□□□ -0.68
APP-213ENST00000464867 NME8Q8N427 588 aa10.82□□□□□ -0.68
APP-213ENST00000464867 ZBTB44Q8NCP5 570 aa10.82□□□□□ -0.68
APP-213ENST00000464867 RSAD2Q8WXG1 361 aa10.82□□□□□ -0.68
APP-213ENST00000464867 TMEM169Q96HH4 297 aa10.82□□□□□ -0.68
APP-213ENST00000464867 TMX1Q9H3N1 280 aa10.82□□□□□ -0.68
APP-213ENST00000464867 PARD6AQ9NPB6 346 aa10.82□□□□□ -0.68
APP-213ENST00000464867 ANAPC4Q9UJX5 808 aa10.82□□□□□ -0.68
APP-213ENST00000464867 ZMIZ1Q9ULJ6 1067 aa10.82□□□□□ -0.68
APP-213ENST00000464867 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.82□□□□□ -0.68
APP-213ENST00000464867 FRYQ5TBA9 3013 aa10.81□□□□□ -0.68
APP-213ENST00000464867 GCOM1H8Y6P7 765 aaPredicted RBP10.81□□□□□ -0.68
APP-213ENST00000464867 GPR182O15218 404 aa10.81□□□□□ -0.68
APP-213ENST00000464867 LRP3O75074 770 aa10.81□□□□□ -0.68
APP-213ENST00000464867 RPS6KA5O75582 802 aa10.81□□□□□ -0.68
APP-213ENST00000464867 POLR2MP0CAP2 368 aa10.81□□□□□ -0.68
APP-213ENST00000464867 HOXA13P31271 388 aaPredicted RBP10.81□□□□□ -0.68
APP-213ENST00000464867 MAGEA9P43362 315 aa10.81□□□□□ -0.68
APP-213ENST00000464867 ALDH7A1P49419 539 aaKnown RBP10.81□□□□□ -0.68
APP-213ENST00000464867 TRAF1Q13077 416 aa10.81□□□□□ -0.68
APP-213ENST00000464867 MARCH8Q5T0T0 291 aa10.81□□□□□ -0.68
APP-213ENST00000464867 ELMSAN1Q6PJG2 1045 aa10.81□□□□□ -0.68
APP-213ENST00000464867 C15orf39Q6ZRI6 1047 aa10.81□□□□□ -0.68
APP-213ENST00000464867 FCHSD1Q86WN1 690 aa10.81□□□□□ -0.68
APP-213ENST00000464867 IL31RAQ8NI17 732 aa10.81□□□□□ -0.68
APP-213ENST00000464867 FAM126AQ9BYI3 521 aaPredicted RBP10.81□□□□□ -0.68
APP-213ENST00000464867 FOXQ1Q9C009 403 aa10.81□□□□□ -0.68
APP-213ENST00000464867 SMARCAD1Q9H4L7 1026 aa10.81□□□□□ -0.68
APP-213ENST00000464867 ELAC1Q9H777 363 aaKnown RBP10.81□□□□□ -0.68
APP-213ENST00000464867 FKBPLQ9UIM3 349 aa10.81□□□□□ -0.68
APP-213ENST00000464867 GINS2Q9Y248 185 aa10.81□□□□□ -0.68
APP-213ENST00000464867 MAP4K5Q9Y4K4 846 aa10.81□□□□□ -0.68
APP-213ENST00000464867 C2orf16Q68DN1 1984 aa10.81□□□□□ -0.68
APP-213ENST00000464867 KDM3AQ9Y4C1 1321 aa10.81□□□□□ -0.68
APP-213ENST00000464867 CARNS1A5YM72 827 aa10.8□□□□□ -0.68
APP-213ENST00000464867 C9IYK1 514 aa10.8□□□□□ -0.68
APP-213ENST00000464867 ZZEF1O43149 2961 aa10.8□□□□□ -0.68
APP-213ENST00000464867 WIPF1O43516 503 aa10.8□□□□□ -0.68
APP-213ENST00000464867 LILRB5O75023 590 aa10.8□□□□□ -0.68
APP-213ENST00000464867 AP1G2O75843 785 aa10.8□□□□□ -0.68
APP-213ENST00000464867 GLULP15104 373 aa10.8□□□□□ -0.68
APP-213ENST00000464867 PBX3P40426 434 aa10.8□□□□□ -0.68
APP-213ENST00000464867 STARD6P59095 220 aa10.8□□□□□ -0.68
APP-213ENST00000464867 GHRHRQ02643 423 aa10.8□□□□□ -0.68
APP-213ENST00000464867 ASPRV1Q53RT3 343 aa10.8□□□□□ -0.68
APP-213ENST00000464867 N4BP2L1Q5TBK1 243 aaPredicted RBP10.8□□□□□ -0.68
APP-213ENST00000464867 LAIR1Q6GTX8 287 aa10.8□□□□□ -0.68
APP-213ENST00000464867 VASH1Q7L8A9 365 aaPredicted RBP10.8□□□□□ -0.68
APP-213ENST00000464867 VPS52Q8N1B4 723 aa10.8□□□□□ -0.68
APP-213ENST00000464867 EPS8L1Q8TE68 723 aa10.8□□□□□ -0.68
APP-213ENST00000464867 SLC22A17Q8WUG5 538 aa10.8□□□□□ -0.68
APP-213ENST00000464867 SEC62Q99442 399 aaKnown RBP10.8□□□□□ -0.68
APP-213ENST00000464867 SENP7Q9BQF6 1050 aa10.8□□□□□ -0.68
APP-213ENST00000464867 LRRCC1Q9C099 1032 aa10.8□□□□□ -0.68
APP-213ENST00000464867 SLC2A4RGQ9NR83 387 aa10.8□□□□□ -0.68
APP-213ENST00000464867 RTEL1Q9NZ71 1219 aa10.8□□□□□ -0.68
APP-213ENST00000464867 NXF1Q9UBU9 619 aaKnown RBP10.8□□□□□ -0.68
APP-213ENST00000464867 PCDHA2Q9Y5H9 948 aa10.8□□□□□ -0.68
APP-213ENST00000464867 PATJQ8NI35 1801 aa10.79□□□□□ -0.68
APP-213ENST00000464867 KANSL1LA0AUZ9 987 aa10.79□□□□□ -0.68
APP-213ENST00000464867 RETP07949 1114 aa10.79□□□□□ -0.68
APP-213ENST00000464867 FGRP09769 529 aa10.79□□□□□ -0.68
APP-213ENST00000464867 INSRRP14616 1297 aa10.79□□□□□ -0.68
APP-213ENST00000464867 NRLP54845 237 aa10.79□□□□□ -0.68
APP-213ENST00000464867 UBXN2BQ14CS0 331 aa10.79□□□□□ -0.68
APP-213ENST00000464867 PDXDC2PQ6P474 469 aa10.79□□□□□ -0.68
APP-213ENST00000464867 LRSAM1Q6UWE0 723 aa10.79□□□□□ -0.68
APP-213ENST00000464867 UNQ6494/PRO21346Q6UXR6 183 aa10.79□□□□□ -0.68
APP-213ENST00000464867 LRRC55Q6ZSA7 311 aa10.79□□□□□ -0.68
APP-213ENST00000464867 NLRX1Q86UT6 975 aa10.79□□□□□ -0.68
APP-213ENST00000464867 SLC39A11Q8N1S5 342 aa10.79□□□□□ -0.68
APP-213ENST00000464867 SEPT1Q8WYJ6 367 aa10.79□□□□□ -0.68
APP-213ENST00000464867 INPP4AQ96PE3 977 aaPredicted RBP10.79□□□□□ -0.68
APP-213ENST00000464867 OCSTAMPQ9BR26 566 aa10.79□□□□□ -0.68
APP-213ENST00000464867 EMILIN2Q9BXX0 1053 aa10.79□□□□□ -0.68
APP-213ENST00000464867 KAT14Q9H8E8 782 aa10.79□□□□□ -0.68
APP-213ENST00000464867 EPS15L1Q9UBC2 864 aa10.79□□□□□ -0.68
APP-213ENST00000464867 ST3GAL5Q9UNP4 418 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms