RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 CLEC2LP0C7M8 214 aa5.55□□□□□ -1.52
CLK1-208ENST00000464454 MTHFD2P13995 350 aa5.55□□□□□ -1.52
CLK1-208ENST00000464454 RPS19P39019 145 aaKnown RBP5.55□□□□□ -1.52
CLK1-208ENST00000464454 HGFACQ04756 655 aa5.55□□□□□ -1.52
CLK1-208ENST00000464454 TCIRG1Q13488 830 aa5.55□□□□□ -1.52
CLK1-208ENST00000464454 TBR1Q16650 682 aa5.55□□□□□ -1.52
CLK1-208ENST00000464454 GAGE13Q4V321 117 aa5.55□□□□□ -1.52
CLK1-208ENST00000464454 PITRM1Q5JRX3 1037 aa5.55□□□□□ -1.52
CLK1-208ENST00000464454 ODR4Q5SWX8 454 aa5.55□□□□□ -1.52
CLK1-208ENST00000464454 CLEC14AQ86T13 490 aa5.55□□□□□ -1.52
CLK1-208ENST00000464454 UNC5BQ8IZJ1 945 aa5.55□□□□□ -1.52
CLK1-208ENST00000464454 PLA2G15Q8NCC3 412 aa5.55□□□□□ -1.52
CLK1-208ENST00000464454 GIMAP8Q8ND71 665 aaPredicted RBP5.55□□□□□ -1.52
CLK1-208ENST00000464454 PPP1R14CQ8TAE6 165 aa5.55□□□□□ -1.52
CLK1-208ENST00000464454 LMBR1Q8WVP7 490 aa5.55□□□□□ -1.52
CLK1-208ENST00000464454 RABGGTAQ92696 567 aa5.55□□□□□ -1.52
CLK1-208ENST00000464454 MTMR8Q96EF0 704 aa5.55□□□□□ -1.52
CLK1-208ENST00000464454 SAMD11Q96NU1 681 aa5.55□□□□□ -1.52
CLK1-208ENST00000464454 UIMC1Q96RL1 719 aa5.55□□□□□ -1.52
CLK1-208ENST00000464454 RBM15Q96T37 977 aaKnown RBP eCLIP5.55□□□□□ -1.52
CLK1-208ENST00000464454 ASPSCR1Q9BZE9 553 aa5.55□□□□□ -1.52
CLK1-208ENST00000464454 NELFAQ9H3P2 528 aa5.55□□□□□ -1.52
CLK1-208ENST00000464454 C14orf119Q9NWQ9 140 aa5.55□□□□□ -1.52
CLK1-208ENST00000464454 SPEF1Q9Y4P9 236 aa5.55□□□□□ -1.52
CLK1-208ENST00000464454 RBM8AQ9Y5S9 174 aaKnown RBP5.55□□□□□ -1.52
CLK1-208ENST00000464454 A0A0A6YYK5 440 aaPredicted RBP5.54□□□□□ -1.52
CLK1-208ENST00000464454 KRTAP9-7A8MTY7 169 aa5.54□□□□□ -1.52
CLK1-208ENST00000464454 MTSS1O43312 755 aa5.54□□□□□ -1.52
CLK1-208ENST00000464454 ALDH1L1O75891 902 aa5.54□□□□□ -1.52
CLK1-208ENST00000464454 SCAND1P57086 179 aa5.54□□□□□ -1.52
CLK1-208ENST00000464454 MRPS9P82933 396 aaKnown RBP5.54□□□□□ -1.52
CLK1-208ENST00000464454 CT83Q5H943 113 aa5.54□□□□□ -1.52
CLK1-208ENST00000464454 SYDE2Q5VT97 1194 aa5.54□□□□□ -1.52
CLK1-208ENST00000464454 TAX1BP1Q86VP1 789 aa5.54□□□□□ -1.52
CLK1-208ENST00000464454 TTC9BQ8N6N2 239 aa5.54□□□□□ -1.52
CLK1-208ENST00000464454 CFHR4Q92496 578 aa5.54□□□□□ -1.52
CLK1-208ENST00000464454 ORAI2Q96SN7 254 aa5.54□□□□□ -1.52
CLK1-208ENST00000464454 DPYSL5Q9BPU6 564 aa5.54□□□□□ -1.52
CLK1-208ENST00000464454 SOX7Q9BT81 388 aa5.54□□□□□ -1.52
CLK1-208ENST00000464454 TRIM8Q9BZR9 551 aa5.54□□□□□ -1.52
CLK1-208ENST00000464454 CCDC8Q9H0W5 538 aaPredicted RBP5.54□□□□□ -1.52
CLK1-208ENST00000464454 KCTD10Q9H3F6 313 aa5.54□□□□□ -1.52
CLK1-208ENST00000464454 VTA1Q9NP79 307 aa5.54□□□□□ -1.52
CLK1-208ENST00000464454 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.54□□□□□ -1.52
CLK1-208ENST00000464454 KLHL42Q9P2K6 505 aa5.54□□□□□ -1.52
CLK1-208ENST00000464454 TRHDEQ9UKU6 1024 aa5.54□□□□□ -1.52
CLK1-208ENST00000464454 TMPRSS11EQ9UL52 423 aa5.54□□□□□ -1.52
CLK1-208ENST00000464454 G3BP2Q9UN86 482 aaKnown RBP5.54□□□□□ -1.52
CLK1-208ENST00000464454 CDY2AQ9Y6F7 541 aa5.54□□□□□ -1.52
CLK1-208ENST00000464454 C2orf78A6NCI8 922 aa5.53□□□□□ -1.52
CLK1-208ENST00000464454 JUNP05412 331 aaKnown RBP5.53□□□□□ -1.52
CLK1-208ENST00000464454 VSIG10L2P0DP72 767 aa5.53□□□□□ -1.52
CLK1-208ENST00000464454 HNRNPLP14866 589 aaKnown RBP eCLIP5.53□□□□□ -1.52
CLK1-208ENST00000464454 ADCY7P51828 1080 aa5.53□□□□□ -1.52
CLK1-208ENST00000464454 BPIFB4P59827 614 aa5.53□□□□□ -1.52
CLK1-208ENST00000464454 ERVK-21P61565 698 aa5.53□□□□□ -1.52
CLK1-208ENST00000464454 MEF2AQ02078 507 aaPredicted RBP5.53□□□□□ -1.52
CLK1-208ENST00000464454 GJC2Q5T442 439 aaPredicted RBP5.53□□□□□ -1.52
CLK1-208ENST00000464454 KRT40Q6A162 431 aa5.53□□□□□ -1.52
CLK1-208ENST00000464454 LIMS2Q7Z4I7 341 aa5.53□□□□□ -1.52
CLK1-208ENST00000464454 AMOTL1Q8IY63 956 aa5.53□□□□□ -1.52
CLK1-208ENST00000464454 SHCBP1Q8NEM2 672 aa5.53□□□□□ -1.52
CLK1-208ENST00000464454 AUTS2Q8WXX7 1259 aa5.53□□□□□ -1.52
CLK1-208ENST00000464454 JDP2Q8WYK2 163 aa5.53□□□□□ -1.52
CLK1-208ENST00000464454 EAF2Q96CJ1 260 aaPredicted RBP5.53□□□□□ -1.52
CLK1-208ENST00000464454 SSBP3Q9BWW4 388 aaPredicted RBP5.53□□□□□ -1.52
CLK1-208ENST00000464454 MATN2O00339 956 aa5.52□□□□□ -1.53
CLK1-208ENST00000464454 NRP1O14786 923 aa5.52□□□□□ -1.53
CLK1-208ENST00000464454 GPR42O15529 346 aa5.52□□□□□ -1.53
CLK1-208ENST00000464454 RAD17O75943 681 aa5.52□□□□□ -1.53
CLK1-208ENST00000464454 TOX4O94842 621 aa5.52□□□□□ -1.53
CLK1-208ENST00000464454 LPLP06858 475 aa5.52□□□□□ -1.53
CLK1-208ENST00000464454 GAAP10253 952 aa5.52□□□□□ -1.53
CLK1-208ENST00000464454 KIR2DL3P43628 341 aa5.52□□□□□ -1.53
CLK1-208ENST00000464454 LGALS4P56470 323 aa5.52□□□□□ -1.53
CLK1-208ENST00000464454 ATP2C1P98194 919 aaPredicted RBP5.52□□□□□ -1.53
CLK1-208ENST00000464454 MGAT5Q09328 741 aa5.52□□□□□ -1.53
CLK1-208ENST00000464454 KLF1Q13351 362 aaPredicted RBP5.52□□□□□ -1.53
CLK1-208ENST00000464454 TRIM25Q14258 630 aaKnown RBP5.52□□□□□ -1.53
CLK1-208ENST00000464454 TTF1Q15361 905 aaPredicted RBP5.52□□□□□ -1.53
CLK1-208ENST00000464454 HS1BP3Q53T59 392 aa5.52□□□□□ -1.53
CLK1-208ENST00000464454 LYSMD2Q8IV50 215 aa5.52□□□□□ -1.53
CLK1-208ENST00000464454 SLC41A1Q8IVJ1 513 aa5.52□□□□□ -1.53
CLK1-208ENST00000464454 ANKRD53Q8N9V6 530 aa5.52□□□□□ -1.53
CLK1-208ENST00000464454 CHST13Q8NET6 341 aa5.52□□□□□ -1.53
CLK1-208ENST00000464454 LOXL4Q96JB6 756 aa5.52□□□□□ -1.53
CLK1-208ENST00000464454 SMAD5Q99717 465 aaKnown RBP5.52□□□□□ -1.53
CLK1-208ENST00000464454 PTPN18Q99952 460 aa5.52□□□□□ -1.53
CLK1-208ENST00000464454 EVLQ9UI08 416 aaPredicted RBP5.52□□□□□ -1.53
CLK1-208ENST00000464454 ZFR2Q9UPR6 939 aaKnown RBP5.52□□□□□ -1.53
CLK1-208ENST00000464454 SLC30A1Q9Y6M5 507 aa5.52□□□□□ -1.53
CLK1-208ENST00000464454 A0A1W2PRX2 142 aa5.51□□□□□ -1.53
CLK1-208ENST00000464454 PATE3B3GLJ2 98 aa5.51□□□□□ -1.53
CLK1-208ENST00000464454 GABRDO14764 452 aa5.51□□□□□ -1.53
CLK1-208ENST00000464454 MARCH6O60337 910 aa5.51□□□□□ -1.53
CLK1-208ENST00000464454 LY86O95711 162 aa5.51□□□□□ -1.53
CLK1-208ENST00000464454 CFBP00751 764 aa5.51□□□□□ -1.53
CLK1-208ENST00000464454 NEK2P51955 445 aa5.51□□□□□ -1.53
CLK1-208ENST00000464454 SLC5A3P53794 718 aa5.51□□□□□ -1.53
CLK1-208ENST00000464454 EPHB1P54762 984 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms