RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 MYL3P08590 195 aa10.86□□□□□ -0.67
PTPRD-207ENST00000463477 PNMA6AP0CW24 399 aaPredicted RBP10.86□□□□□ -0.67
PTPRD-207ENST00000463477 HOXD8P13378 290 aaPredicted RBP10.86□□□□□ -0.67
PTPRD-207ENST00000463477 UBA1P22314 1058 aaKnown RBP10.86□□□□□ -0.67
PTPRD-207ENST00000463477 DMTNQ08495 405 aa10.86□□□□□ -0.67
PTPRD-207ENST00000463477 FAAP100Q0VG06 881 aa10.86□□□□□ -0.67
PTPRD-207ENST00000463477 EDRF1Q3B7T1 1238 aa10.86□□□□□ -0.67
PTPRD-207ENST00000463477 HSDL1Q3SXM5 330 aa10.86□□□□□ -0.67
PTPRD-207ENST00000463477 METTL7BQ6UX53 244 aa10.86□□□□□ -0.67
PTPRD-207ENST00000463477 ERMNQ8TAM6 284 aa10.86□□□□□ -0.67
PTPRD-207ENST00000463477 RPGRIP1Q96KN7 1286 aa10.86□□□□□ -0.67
PTPRD-207ENST00000463477 MXRA8Q9BRK3 442 aa10.86□□□□□ -0.67
PTPRD-207ENST00000463477 NUCKS1Q9H1E3 243 aaKnown RBP10.86□□□□□ -0.67
PTPRD-207ENST00000463477 NHEJ1Q9H9Q4 299 aaPredicted RBP10.86□□□□□ -0.67
PTPRD-207ENST00000463477 AGPAT5Q9NUQ2 364 aa10.86□□□□□ -0.67
PTPRD-207ENST00000463477 PANK4Q9NVE7 773 aa10.86□□□□□ -0.67
PTPRD-207ENST00000463477 PRKAG2Q9UGJ0 569 aa10.86□□□□□ -0.67
PTPRD-207ENST00000463477 ZMYND8Q9ULU4 1186 aaPredicted RBP10.86□□□□□ -0.67
PTPRD-207ENST00000463477 MYH11P35749 1972 aa10.86□□□□□ -0.67
PTPRD-207ENST00000463477 MEIS1O00470 390 aa10.85□□□□□ -0.67
PTPRD-207ENST00000463477 PQBP1O60828 265 aaKnown RBP10.85□□□□□ -0.67
PTPRD-207ENST00000463477 CLTBP09497 229 aa10.85□□□□□ -0.67
PTPRD-207ENST00000463477 PLA2G4BP0C869 781 aa10.85□□□□□ -0.67
PTPRD-207ENST00000463477 IDEP14735 1019 aa10.85□□□□□ -0.67
PTPRD-207ENST00000463477 SYN1P17600 705 aa10.85□□□□□ -0.67
PTPRD-207ENST00000463477 RPA1P27694 616 aa10.85□□□□□ -0.67
PTPRD-207ENST00000463477 VAV2P52735 878 aa10.85□□□□□ -0.67
PTPRD-207ENST00000463477 MTMR1Q13613 665 aa10.85□□□□□ -0.67
PTPRD-207ENST00000463477 CEP55Q53EZ4 464 aa10.85□□□□□ -0.67
PTPRD-207ENST00000463477 TEX35Q5T0J7 233 aa10.85□□□□□ -0.67
PTPRD-207ENST00000463477 PAPD7Q5XG87 772 aaKnown RBP10.85□□□□□ -0.67
PTPRD-207ENST00000463477 CC2D1AQ6P1N0 951 aaPredicted RBP10.85□□□□□ -0.67
PTPRD-207ENST00000463477 TRAPPC11Q7Z392 1133 aa10.85□□□□□ -0.67
PTPRD-207ENST00000463477 FAM126BQ8IXS8 530 aa10.85□□□□□ -0.67
PTPRD-207ENST00000463477 SYN2Q92777 582 aaPredicted RBP10.85□□□□□ -0.67
PTPRD-207ENST00000463477 HPS3Q969F9 1004 aa10.85□□□□□ -0.67
PTPRD-207ENST00000463477 LENG9Q96B70 501 aa10.85□□□□□ -0.67
PTPRD-207ENST00000463477 SPATA33Q96N06 139 aa10.85□□□□□ -0.67
PTPRD-207ENST00000463477 GDF15Q99988 308 aa10.85□□□□□ -0.67
PTPRD-207ENST00000463477 PRO3102Q9H379 93 aa10.85□□□□□ -0.67
PTPRD-207ENST00000463477 PDLIM7Q9NR12 457 aa10.85□□□□□ -0.67
PTPRD-207ENST00000463477 MYO6Q9UM54 1294 aa10.85□□□□□ -0.67
PTPRD-207ENST00000463477 COL4A3BPQ9Y5P4 624 aa10.85□□□□□ -0.67
PTPRD-207ENST00000463477 TRIM43BA6NCK2 446 aa10.85□□□□□ -0.67
PTPRD-207ENST00000463477 KIAA0355O15063 1070 aa10.85□□□□□ -0.67
PTPRD-207ENST00000463477 ATP9AO75110 1047 aa10.85□□□□□ -0.67
PTPRD-207ENST00000463477 CD4P01730 458 aa10.85□□□□□ -0.67
PTPRD-207ENST00000463477 KCNA2P16389 499 aa10.85□□□□□ -0.67
PTPRD-207ENST00000463477 CYP11B2P19099 503 aa10.85□□□□□ -0.67
PTPRD-207ENST00000463477 BMP8BP34820 402 aa10.85□□□□□ -0.67
PTPRD-207ENST00000463477 SLC12A3P55017 1021 aa10.85□□□□□ -0.67
PTPRD-207ENST00000463477 PSMC6P62333 389 aa10.85□□□□□ -0.67
PTPRD-207ENST00000463477 PTPN11Q06124 597 aaPredicted RBP10.85□□□□□ -0.67
PTPRD-207ENST00000463477 NFRKBQ6P4R8 1299 aa10.85□□□□□ -0.67
PTPRD-207ENST00000463477 CYFIP1Q7L576 1253 aa10.85□□□□□ -0.67
PTPRD-207ENST00000463477 NIPA1Q7RTP0 329 aa10.85□□□□□ -0.67
PTPRD-207ENST00000463477 TXLNBQ8N3L3 684 aa10.85□□□□□ -0.67
PTPRD-207ENST00000463477 KAT2BQ92831 832 aa10.85□□□□□ -0.67
PTPRD-207ENST00000463477 JAKMIP2Q96AA8 810 aa10.85□□□□□ -0.67
PTPRD-207ENST00000463477 TRIM43Q96BQ3 446 aaPredicted RBP10.85□□□□□ -0.67
PTPRD-207ENST00000463477 POLR3CQ9BUI4 534 aaPredicted RBP10.85□□□□□ -0.67
PTPRD-207ENST00000463477 PARD6BQ9BYG5 372 aa10.85□□□□□ -0.67
PTPRD-207ENST00000463477 UBXN6Q9BZV1 441 aa10.85□□□□□ -0.67
PTPRD-207ENST00000463477 BCAS3Q9H6U6 928 aa10.85□□□□□ -0.67
PTPRD-207ENST00000463477 ARFGAP3Q9NP61 516 aa10.85□□□□□ -0.67
PTPRD-207ENST00000463477 KCNH7Q9NS40 1196 aa10.85□□□□□ -0.67
PTPRD-207ENST00000463477 KIAA1024Q9UPX6 916 aa10.85□□□□□ -0.67
PTPRD-207ENST00000463477 SSU72P8A0A1W2PR75 194 aa10.84□□□□□ -0.67
PTPRD-207ENST00000463477 CTAGE15A4D2H0 777 aa10.84□□□□□ -0.67
PTPRD-207ENST00000463477 TLR3O15455 904 aaKnown RBP10.84□□□□□ -0.67
PTPRD-207ENST00000463477 ABL1P00519 1130 aa10.84□□□□□ -0.67
PTPRD-207ENST00000463477 CTAGE8P0CG41 777 aa10.84□□□□□ -0.67
PTPRD-207ENST00000463477 MUTP22033 750 aa10.84□□□□□ -0.67
PTPRD-207ENST00000463477 NBPF20Q3BBV1 942 aa10.84□□□□□ -0.67
PTPRD-207ENST00000463477 CCDC122Q5T0U0 273 aa10.84□□□□□ -0.67
PTPRD-207ENST00000463477 KIAA1328Q86T90 577 aa10.84□□□□□ -0.67
PTPRD-207ENST00000463477 CTAGE6Q86UF2 777 aa10.84□□□□□ -0.67
PTPRD-207ENST00000463477 GPBP1Q86WP2 473 aa10.84□□□□□ -0.67
PTPRD-207ENST00000463477 CTAGE4Q8IX94 777 aa10.84□□□□□ -0.67
PTPRD-207ENST00000463477 SYT2Q8N9I0 419 aaPredicted RBP10.84□□□□□ -0.67
PTPRD-207ENST00000463477 CYP2W1Q8TAV3 490 aa10.84□□□□□ -0.67
PTPRD-207ENST00000463477 CCDC42Q96M95 316 aa10.84□□□□□ -0.67
PTPRD-207ENST00000463477 PCMTD1Q96MG8 357 aaPredicted RBP10.84□□□□□ -0.67
PTPRD-207ENST00000463477 KCTD10Q9H3F6 313 aa10.84□□□□□ -0.67
PTPRD-207ENST00000463477 TMEM39AQ9NV64 488 aa10.84□□□□□ -0.67
PTPRD-207ENST00000463477 COLQQ9Y215 455 aaPredicted RBP10.84□□□□□ -0.67
PTPRD-207ENST00000463477 POTEB3A0JP26 581 aa10.83□□□□□ -0.68
PTPRD-207ENST00000463477 E9PMD0 336 aa10.83□□□□□ -0.68
PTPRD-207ENST00000463477 FAM86B1E9PN63 330 aa10.83□□□□□ -0.68
PTPRD-207ENST00000463477 HAS3O00219 553 aa10.83□□□□□ -0.68
PTPRD-207ENST00000463477 PJA2O43164 708 aa10.83□□□□□ -0.68
PTPRD-207ENST00000463477 USO1O60763 962 aaKnown RBP10.83□□□□□ -0.68
PTPRD-207ENST00000463477 MED24O75448 989 aa10.83□□□□□ -0.68
PTPRD-207ENST00000463477 F2P00734 622 aa10.83□□□□□ -0.68
PTPRD-207ENST00000463477 FAM86B2P0C5J1 330 aa10.83□□□□□ -0.68
PTPRD-207ENST00000463477 SUPT20HL2P0C7V6 817 aa10.83□□□□□ -0.68
PTPRD-207ENST00000463477 ZNF76P36508 570 aa10.83□□□□□ -0.68
PTPRD-207ENST00000463477 KLK7P49862 253 aa10.83□□□□□ -0.68
PTPRD-207ENST00000463477 SPA17Q15506 151 aa10.83□□□□□ -0.68
PTPRD-207ENST00000463477 BMT2Q1RMZ1 405 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms