RNA–Protein interactions for RNA: ENST00000463455.1

RTCB-202, Transcript of RNA 2',3'-cyclic phosphate and 5'-OH ligase, humanhuman

TSL 2

Gene RTCB, Length 628 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCB-202ENST00000463455 SLITRK3O94933 977 aa13.28□□□□□ -0.28
RTCB-202ENST00000463455 FGFR1P11362 822 aa13.28□□□□□ -0.28
RTCB-202ENST00000463455 TRAPPC10P48553 1259 aa13.28□□□□□ -0.28
RTCB-202ENST00000463455 GATMP50440 423 aa13.28□□□□□ -0.28
RTCB-202ENST00000463455 NPEPPSP55786 919 aa13.28□□□□□ -0.28
RTCB-202ENST00000463455 HYAL1Q12794 435 aa13.28□□□□□ -0.28
RTCB-202ENST00000463455 MXD4Q14582 209 aaPredicted RBP13.28□□□□□ -0.28
RTCB-202ENST00000463455 EMC2Q15006 297 aa13.28□□□□□ -0.28
RTCB-202ENST00000463455 RABEP1Q15276 862 aa13.28□□□□□ -0.28
RTCB-202ENST00000463455 PTCRAQ6ISU1 281 aaPredicted RBP13.28□□□□□ -0.28
RTCB-202ENST00000463455 CCDC83Q8IWF9 413 aa13.28□□□□□ -0.28
RTCB-202ENST00000463455 EFHBQ8N7U6 833 aa13.28□□□□□ -0.28
RTCB-202ENST00000463455 FBXO18Q8NFZ0 1043 aa13.28□□□□□ -0.28
RTCB-202ENST00000463455 DDX27Q96GQ7 796 aaKnown RBP13.28□□□□□ -0.28
RTCB-202ENST00000463455 DYDC2Q96IM9 177 aa13.28□□□□□ -0.28
RTCB-202ENST00000463455 NLRP4Q96MN2 994 aa13.28□□□□□ -0.28
RTCB-202ENST00000463455 MTRQ99707 1265 aa13.28□□□□□ -0.28
RTCB-202ENST00000463455 CWH43Q9H720 699 aa13.28□□□□□ -0.28
RTCB-202ENST00000463455 IFT122Q9HBG6 1241 aa13.28□□□□□ -0.28
RTCB-202ENST00000463455 TLR9Q9NR96 1032 aa13.28□□□□□ -0.28
RTCB-202ENST00000463455 RNF19AQ9NV58 838 aa13.28□□□□□ -0.28
RTCB-202ENST00000463455 TYW1Q9NV66 732 aaKnown RBP13.28□□□□□ -0.28
RTCB-202ENST00000463455 CLDND1Q9NY35 253 aa13.28□□□□□ -0.28
RTCB-202ENST00000463455 RGL1Q9NZL6 768 aa13.28□□□□□ -0.28
RTCB-202ENST00000463455 DAXXQ9UER7 740 aaPredicted RBP13.28□□□□□ -0.28
RTCB-202ENST00000463455 ARID2Q68CP9 1835 aa13.27□□□□□ -0.28
RTCB-202ENST00000463455 DGAT1O75907 488 aa13.27□□□□□ -0.29
RTCB-202ENST00000463455 FGF18O76093 207 aa13.27□□□□□ -0.29
RTCB-202ENST00000463455 DNAJB1P25685 340 aa13.27□□□□□ -0.29
RTCB-202ENST00000463455 PHKA2P46019 1235 aa13.27□□□□□ -0.29
RTCB-202ENST00000463455 LAMTOR4Q0VGL1 99 aa13.27□□□□□ -0.29
RTCB-202ENST00000463455 XKR9Q5GH70 373 aa13.27□□□□□ -0.29
RTCB-202ENST00000463455 TWF2Q6IBS0 349 aaKnown RBP13.27□□□□□ -0.29
RTCB-202ENST00000463455 CATSPER4Q7RTX7 472 aa13.27□□□□□ -0.29
RTCB-202ENST00000463455 TPH2Q8IWU9 490 aa13.27□□□□□ -0.29
RTCB-202ENST00000463455 FAM178BQ8IXR5 827 aa13.27□□□□□ -0.29
RTCB-202ENST00000463455 THNSL1Q8IYQ7 743 aa13.27□□□□□ -0.29
RTCB-202ENST00000463455 SH2D3AQ9BRG2 576 aa13.27□□□□□ -0.29
RTCB-202ENST00000463455 C1QTNF1Q9BXJ1 281 aa13.27□□□□□ -0.29
RTCB-202ENST00000463455 AGPAT5Q9NUQ2 364 aa13.27□□□□□ -0.29
RTCB-202ENST00000463455 PUF60Q9UHX1 559 aaKnown RBP13.27□□□□□ -0.29
RTCB-202ENST00000463455 PIN4Q9Y237 131 aaKnown RBP13.27□□□□□ -0.29
RTCB-202ENST00000463455 KIF3AQ9Y496 699 aa13.27□□□□□ -0.29
RTCB-202ENST00000463455 DTNBO60941 627 aa13.26□□□□□ -0.29
RTCB-202ENST00000463455 ATF7P17544 494 aaPredicted RBP13.26□□□□□ -0.29
RTCB-202ENST00000463455 MUTP22033 750 aa13.26□□□□□ -0.29
RTCB-202ENST00000463455 AXLP30530 894 aa13.26□□□□□ -0.29
RTCB-202ENST00000463455 LTBRP36941 435 aa13.26□□□□□ -0.29
RTCB-202ENST00000463455 CYP4A11Q02928 519 aa13.26□□□□□ -0.29
RTCB-202ENST00000463455 KRT17Q04695 432 aa13.26□□□□□ -0.29
RTCB-202ENST00000463455 ADAM15Q13444 863 aa13.26□□□□□ -0.29
RTCB-202ENST00000463455 TFDP1Q14186 410 aa13.26□□□□□ -0.29
RTCB-202ENST00000463455 CTTNQ14247 550 aaKnown RBP13.26□□□□□ -0.29
RTCB-202ENST00000463455 E2F4Q16254 413 aa13.26□□□□□ -0.29
RTCB-202ENST00000463455 CLLU1OSQ5K130 101 aa13.26□□□□□ -0.29
RTCB-202ENST00000463455 KCNT2Q6UVM3 1135 aa13.26□□□□□ -0.29
RTCB-202ENST00000463455 FERMT3Q86UX7 667 aa13.26□□□□□ -0.29
RTCB-202ENST00000463455 FAM184AQ8NB25 1140 aa13.26□□□□□ -0.29
RTCB-202ENST00000463455 ERMNQ8TAM6 284 aa13.26□□□□□ -0.29
RTCB-202ENST00000463455 PRPF31Q8WWY3 499 aaKnown RBP13.26□□□□□ -0.29
RTCB-202ENST00000463455 MRPS27Q92552 414 aaKnown RBP13.26□□□□□ -0.29
RTCB-202ENST00000463455 PGBD4Q96DM1 585 aa13.26□□□□□ -0.29
RTCB-202ENST00000463455 CCDC51Q96ER9 411 aa13.26□□□□□ -0.29
RTCB-202ENST00000463455 ZNF668Q96K58 619 aaPredicted RBP13.26□□□□□ -0.29
RTCB-202ENST00000463455 ZNF558Q96NG5 402 aa13.26□□□□□ -0.29
RTCB-202ENST00000463455 NECAB3Q96P71 396 aaPredicted RBP13.26□□□□□ -0.29
RTCB-202ENST00000463455 NFKBIZQ9BYH8 718 aa13.26□□□□□ -0.29
RTCB-202ENST00000463455 UPF2Q9HAU5 1272 aaKnown RBP13.26□□□□□ -0.29
RTCB-202ENST00000463455 PLXNA4Q9HCM2 1894 aa13.26□□□□□ -0.29
RTCB-202ENST00000463455 TUFT1Q9NNX1 390 aa13.26□□□□□ -0.29
RTCB-202ENST00000463455 NGRNQ9NPE2 291 aaKnown RBP13.26□□□□□ -0.29
RTCB-202ENST00000463455 FAM105AQ9NUU6 356 aa13.26□□□□□ -0.29
RTCB-202ENST00000463455 STK39Q9UEW8 545 aa13.26□□□□□ -0.29
RTCB-202ENST00000463455 CNTNAP2Q9UHC6 1331 aa13.25□□□□□ -0.29
RTCB-202ENST00000463455 H3BQ06 376 aaPredicted RBP13.25□□□□□ -0.29
RTCB-202ENST00000463455 FSCN2O14926 492 aa13.25□□□□□ -0.29
RTCB-202ENST00000463455 ST18O60284 1047 aa13.25□□□□□ -0.29
RTCB-202ENST00000463455 IBSPP21815 317 aaPredicted RBP13.25□□□□□ -0.29
RTCB-202ENST00000463455 FGFR4P22455 802 aa13.25□□□□□ -0.29
RTCB-202ENST00000463455 MCM7P33993 719 aa13.25□□□□□ -0.29
RTCB-202ENST00000463455 TXKP42681 527 aa13.25□□□□□ -0.29
RTCB-202ENST00000463455 RARRES1P49788 294 aa13.25□□□□□ -0.29
RTCB-202ENST00000463455 SMAD4Q13485 552 aaKnown RBP13.25□□□□□ -0.29
RTCB-202ENST00000463455 GLB1LQ6UWU2 654 aa13.25□□□□□ -0.29
RTCB-202ENST00000463455 LRRC55Q6ZSA7 311 aa13.25□□□□□ -0.29
RTCB-202ENST00000463455 NOSTRINQ8IVI9 506 aa13.25□□□□□ -0.29
RTCB-202ENST00000463455 RNF149Q8NC42 400 aa13.25□□□□□ -0.29
RTCB-202ENST00000463455 CNNM3Q8NE01 707 aa13.25□□□□□ -0.29
RTCB-202ENST00000463455 TMEM143Q96AN5 459 aa13.25□□□□□ -0.29
RTCB-202ENST00000463455 CCDC43Q96MW1 224 aaKnown RBP13.25□□□□□ -0.29
RTCB-202ENST00000463455 POP1Q99575 1024 aaKnown RBP13.25□□□□□ -0.29
RTCB-202ENST00000463455 POLR3CQ9BUI4 534 aaPredicted RBP13.25□□□□□ -0.29
RTCB-202ENST00000463455 SPG21Q9NZD8 308 aa13.25□□□□□ -0.29
RTCB-202ENST00000463455 DBR1Q9UK59 544 aaKnown RBP13.25□□□□□ -0.29
RTCB-202ENST00000463455 NOL7Q9UMY1 257 aaKnown RBP13.25□□□□□ -0.29
RTCB-202ENST00000463455 WNT7AO00755 349 aa13.24□□□□□ -0.29
RTCB-202ENST00000463455 TBX10O75333 385 aa13.24□□□□□ -0.29
RTCB-202ENST00000463455 CSDE1O75534 798 aaKnown RBP13.24□□□□□ -0.29
RTCB-202ENST00000463455 EYA4O95677 639 aa13.24□□□□□ -0.29
RTCB-202ENST00000463455 OR52Z1P0C646 297 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms