RNA–Protein interactions for RNA: ENST00000462604.1

COL8A1-204, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-204ENST00000462604 TRIM49P0CI25 452 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 TRIM49CP0CI26 452 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 SPATA31C1P0DKV0 1188 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 ALAS1P13196 640 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 VCAM1P19320 739 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 MUTP22033 750 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 CTNNA2P26232 953 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 CIITAP33076 1130 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 MAN1A1P33908 653 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 HOXD13P35453 343 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 CASP4P49662 377 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 PDE6CP51160 858 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 CYP2J2P51589 502 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 ZNF131P52739 623 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 CLNS1AP54105 237 aaKnown RBP3.79□□□□□ -1.8
COL8A1-204ENST00000462604 PSMC6P62333 389 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 GPC5P78333 572 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 GTF2IP78347 998 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 ELF3P78545 371 aaPredicted RBP3.79□□□□□ -1.8
COL8A1-204ENST00000462604 LACTBP83111 547 aaPredicted RBP3.79□□□□□ -1.8
COL8A1-204ENST00000462604 POU5F1Q01860 360 aaKnown RBP3.79□□□□□ -1.8
COL8A1-204ENST00000462604 CYP4A11Q02928 519 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 ICA1Q05084 483 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 PPATQ06203 517 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 SPIRE1Q08AE8 756 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 ZNF211Q13398 564 aaPredicted RBP3.79□□□□□ -1.8
COL8A1-204ENST00000462604 ALCAMQ13740 583 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 CTTNQ14247 550 aaKnown RBP3.79□□□□□ -1.8
COL8A1-204ENST00000462604 MYBPC2Q14324 1141 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 PLS1Q14651 629 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 TCEAL1Q15170 157 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 PPP1R7Q15435 360 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 SLC15A2Q16348 729 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 TRAPPC3LQ5T215 181 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 DCAF8Q5TAQ9 597 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 SYDE2Q5VT97 1194 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 DCAF12L1Q5VU92 463 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 MFSD5Q6N075 450 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 ZDHHC24Q6UX98 284 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 CEP128Q6ZU80 1094 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 SYDE1Q6ZW31 735 aaPredicted RBP3.79□□□□□ -1.8
COL8A1-204ENST00000462604 SMIM5Q71RC9 77 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 TRMT10CQ7L0Y3 403 aaKnown RBP3.79□□□□□ -1.8
COL8A1-204ENST00000462604 CYFIP1Q7L576 1253 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 TRPM8Q7Z2W7 1104 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 ADAT2Q7Z6V5 191 aaKnown RBP3.79□□□□□ -1.8
COL8A1-204ENST00000462604 DNAAF5Q86Y56 855 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 CLEC10AQ8IUN9 316 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 FAM178BQ8IXR5 827 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 CCDC105Q8IYK2 499 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 LRRC34Q8IZ02 419 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 SYCP3Q8IZU3 236 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 PROCA1Q8NCQ7 364 aaPredicted RBP3.79□□□□□ -1.8
COL8A1-204ENST00000462604 GMCL1P1Q8NEA9 526 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 TBC1D16Q8TBP0 767 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 MDM1Q8TC05 714 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 FBXO25Q8TCJ0 367 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 CERKQ8TCT0 537 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 GRK7Q8WTQ7 553 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 MAIP1Q8WWC4 291 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 ATXN2LQ8WWM7 1075 aaKnown RBP3.79□□□□□ -1.8
COL8A1-204ENST00000462604 CCT6BQ92526 530 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 ART4Q93070 314 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 TEKT1Q969V4 418 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 ARHGEF26Q96DR7 871 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 HOOK2Q96ED9 719 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 BORCS6Q96GS4 357 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 GMCL1Q96IK5 515 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 RSRC1Q96IZ7 334 aaKnown RBP3.79□□□□□ -1.8
COL8A1-204ENST00000462604 ZNF317Q96PQ6 595 aaPredicted RBP3.79□□□□□ -1.8
COL8A1-204ENST00000462604 UIMC1Q96RL1 719 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 RPS6KC1Q96S38 1066 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 AGPAT1Q99943 283 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 SYT11Q9BT88 431 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 RUSC1Q9BVN2 902 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 OSBPL7Q9BZF2 842 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 ROPN1BQ9BZX4 212 aaPredicted RBP3.79□□□□□ -1.8
COL8A1-204ENST00000462604 CCDC113Q9H0I3 377 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 THAP2Q9H0W7 228 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 WNT8AQ9H1J5 351 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 BHMT2Q9H2M3 363 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 ROPN1Q9HAT0 212 aaPredicted RBP3.79□□□□□ -1.8
COL8A1-204ENST00000462604 NOD2Q9HC29 1040 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 OSGEPQ9NPF4 335 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 AGPAT3Q9NRZ7 376 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP3.79□□□□□ -1.8
COL8A1-204ENST00000462604 GRHL1Q9NZI5 618 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 KCND2Q9NZV8 630 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 PCYOX1Q9UHG3 505 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 BAIAP2L1Q9UHR4 511 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 VAV3Q9UKW4 847 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 PPP1R9AQ9ULJ8 1098 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 TPX2Q9ULW0 747 aaKnown RBP3.79□□□□□ -1.8
COL8A1-204ENST00000462604 SLC12A4Q9UP95 1085 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 SNX24Q9Y343 169 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 AHDC1Q5TGY3 1603 aaPredicted RBP3.79□□□□□ -1.8
COL8A1-204ENST00000462604 A0A1B0GUL6 1792 aa3.79□□□□□ -1.8
COL8A1-204ENST00000462604 MYH3P11055 1940 aa3.78□□□□□ -1.8
COL8A1-204ENST00000462604 COL16A1Q07092 1604 aaPredicted RBP3.78□□□□□ -1.8
COL8A1-204ENST00000462604 AFF2P51816 1311 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms