RNA–Protein interactions for RNA: ENST00000461394.5

MSH2-204, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-204ENST00000461394 METTL7BQ6UX53 244 aa7.42□□□□□ -1.22
MSH2-204ENST00000461394 PLEKHH3Q7Z736 793 aa7.42□□□□□ -1.22
MSH2-204ENST00000461394 XXYLT1Q8NBI6 393 aa7.42□□□□□ -1.22
MSH2-204ENST00000461394 SCFD2Q8WU76 684 aa7.42□□□□□ -1.22
MSH2-204ENST00000461394 COPS5Q92905 334 aa7.42□□□□□ -1.22
MSH2-204ENST00000461394 TMEM143Q96AN5 459 aa7.42□□□□□ -1.22
MSH2-204ENST00000461394 MKNK1Q9BUB5 465 aa7.42□□□□□ -1.22
MSH2-204ENST00000461394 EDEM3Q9BZQ6 932 aa7.42□□□□□ -1.22
MSH2-204ENST00000461394 NUCKS1Q9H1E3 243 aaKnown RBP7.42□□□□□ -1.22
MSH2-204ENST00000461394 NHEJ1Q9H9Q4 299 aaPredicted RBP7.42□□□□□ -1.22
MSH2-204ENST00000461394 C17orf75Q9HAS0 396 aa7.42□□□□□ -1.22
MSH2-204ENST00000461394 SLC5A4Q9NY91 659 aa7.42□□□□□ -1.22
MSH2-204ENST00000461394 GCNT4Q9P109 453 aa7.42□□□□□ -1.22
MSH2-204ENST00000461394 KCNG1Q9UIX4 513 aa7.42□□□□□ -1.22
MSH2-204ENST00000461394 DDX41Q9UJV9 622 aaKnown RBP7.42□□□□□ -1.22
MSH2-204ENST00000461394 TBX20Q9UMR3 447 aa7.42□□□□□ -1.22
MSH2-204ENST00000461394 ADGRG1Q9Y653 693 aa7.42□□□□□ -1.22
MSH2-204ENST00000461394 EPN1Q9Y6I3 576 aaPredicted RBP7.42□□□□□ -1.22
MSH2-204ENST00000461394 DNAJC25-GNG10A0A024R161 153 aa7.41□□□□□ -1.22
MSH2-204ENST00000461394 LOC102724159A0A0B4J2E5 919 aa7.41□□□□□ -1.22
MSH2-204ENST00000461394 RASSF10A6NK89 507 aa7.41□□□□□ -1.22
MSH2-204ENST00000461394 TTLL13PA6NNM8 815 aa7.41□□□□□ -1.22
MSH2-204ENST00000461394 TISP43B9A030 160 aa7.41□□□□□ -1.22
MSH2-204ENST00000461394 HNRNPDLO14979 420 aaKnown RBP7.41□□□□□ -1.22
MSH2-204ENST00000461394 EPHB6O15197 1021 aa7.41□□□□□ -1.22
MSH2-204ENST00000461394 STRNO43815 780 aa7.41□□□□□ -1.22
MSH2-204ENST00000461394 EVI5O60447 810 aa7.41□□□□□ -1.22
MSH2-204ENST00000461394 N4BP1O75113 896 aaKnown RBP7.41□□□□□ -1.22
MSH2-204ENST00000461394 URI1O94763 535 aaPredicted RBP7.41□□□□□ -1.22
MSH2-204ENST00000461394 ATG7O95352 703 aa7.41□□□□□ -1.22
MSH2-204ENST00000461394 ARIH2O95376 493 aa7.41□□□□□ -1.22
MSH2-204ENST00000461394 GH1P01241 217 aa7.41□□□□□ -1.22
MSH2-204ENST00000461394 ACTN1P12814 892 aa7.41□□□□□ -1.22
MSH2-204ENST00000461394 SLC9A1P19634 815 aa7.41□□□□□ -1.22
MSH2-204ENST00000461394 MAPK4P31152 587 aa7.41□□□□□ -1.22
MSH2-204ENST00000461394 ABCD1P33897 745 aa7.41□□□□□ -1.22
MSH2-204ENST00000461394 EIF4A3P38919 411 aaKnown RBP7.41□□□□□ -1.22
MSH2-204ENST00000461394 VAMP7P51809 220 aa7.41□□□□□ -1.22
MSH2-204ENST00000461394 TERF1P54274 439 aa7.41□□□□□ -1.22
MSH2-204ENST00000461394 SNRPFP62306 86 aaKnown RBP7.41□□□□□ -1.22
MSH2-204ENST00000461394 ETF1P62495 437 aaKnown RBP7.41□□□□□ -1.22
MSH2-204ENST00000461394 GTF2BQ00403 316 aa7.41□□□□□ -1.22
MSH2-204ENST00000461394 KCNMA1Q12791 1236 aa7.41□□□□□ -1.22
MSH2-204ENST00000461394 GRM1Q13255 1194 aa7.41□□□□□ -1.22
MSH2-204ENST00000461394 MYBPC2Q14324 1141 aa7.41□□□□□ -1.22
MSH2-204ENST00000461394 PWP2Q15269 919 aaKnown RBP7.41□□□□□ -1.22
MSH2-204ENST00000461394 SLC9C1Q4G0N8 1177 aa7.41□□□□□ -1.22
MSH2-204ENST00000461394 ZNF569Q5MCW4 686 aa7.41□□□□□ -1.22
MSH2-204ENST00000461394 GPR142Q7Z601 462 aa7.41□□□□□ -1.22
MSH2-204ENST00000461394 EXOC8Q8IYI6 725 aa7.41□□□□□ -1.22
MSH2-204ENST00000461394 CCDC170Q8IYT3 715 aa7.41□□□□□ -1.22
MSH2-204ENST00000461394 TXLNBQ8N3L3 684 aa7.41□□□□□ -1.22
MSH2-204ENST00000461394 MYRIPQ8NFW9 859 aa7.41□□□□□ -1.22
MSH2-204ENST00000461394 SPIRE2Q8WWL2 714 aa7.41□□□□□ -1.22
MSH2-204ENST00000461394 BSNDQ8WZ55 320 aa7.41□□□□□ -1.22
MSH2-204ENST00000461394 POMGNT1Q8WZA1 660 aa7.41□□□□□ -1.22
MSH2-204ENST00000461394 JAKMIP2Q96AA8 810 aa7.41□□□□□ -1.22
MSH2-204ENST00000461394 SAAL1Q96ER3 474 aa7.41□□□□□ -1.22
MSH2-204ENST00000461394 MS4A3Q96HJ5 214 aa7.41□□□□□ -1.22
MSH2-204ENST00000461394 CALR3Q96L12 384 aaKnown RBP7.41□□□□□ -1.22
MSH2-204ENST00000461394 FGD4Q96M96 766 aa7.41□□□□□ -1.22
MSH2-204ENST00000461394 FIZ1Q96SL8 496 aa7.41□□□□□ -1.22
MSH2-204ENST00000461394 GPR20Q99678 358 aa7.41□□□□□ -1.22
MSH2-204ENST00000461394 CBWD1Q9BRT8 395 aa7.41□□□□□ -1.22
MSH2-204ENST00000461394 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.41□□□□□ -1.22
MSH2-204ENST00000461394 TTYH3Q9C0H2 523 aa7.41□□□□□ -1.22
MSH2-204ENST00000461394 ST6GALNAC4Q9H4F1 302 aa7.41□□□□□ -1.22
MSH2-204ENST00000461394 SUGCTQ9HAC7 445 aa7.41□□□□□ -1.22
MSH2-204ENST00000461394 VTA1Q9NP79 307 aa7.41□□□□□ -1.22
MSH2-204ENST00000461394 LUC7LQ9NQ29 371 aaKnown RBP7.41□□□□□ -1.22
MSH2-204ENST00000461394 PDGFCQ9NRA1 345 aa7.41□□□□□ -1.22
MSH2-204ENST00000461394 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.41□□□□□ -1.22
MSH2-204ENST00000461394 HSPBP1Q9NZL4 362 aa7.41□□□□□ -1.22
MSH2-204ENST00000461394 MORF4L1Q9UBU8 362 aa7.41□□□□□ -1.22
MSH2-204ENST00000461394 CPA4Q9UI42 421 aa7.41□□□□□ -1.22
MSH2-204ENST00000461394 ZHX1Q9UKY1 873 aaPredicted RBP7.41□□□□□ -1.22
MSH2-204ENST00000461394 GUCA1BQ9UMX6 200 aa7.41□□□□□ -1.22
MSH2-204ENST00000461394 MAFBQ9Y5Q3 323 aaPredicted RBP7.41□□□□□ -1.22
MSH2-204ENST00000461394 PHLPP2Q6ZVD8 1323 aa7.41□□□□□ -1.22
MSH2-204ENST00000461394 SIP14410 1827 aa7.41□□□□□ -1.22
MSH2-204ENST00000461394 MANSC4A6NHS7 340 aaPredicted RBP7.4□□□□□ -1.22
MSH2-204ENST00000461394 K7ERI5 159 aa7.4□□□□□ -1.22
MSH2-204ENST00000461394 SOCS7O14512 581 aa7.4□□□□□ -1.22
MSH2-204ENST00000461394 KRT86O43790 486 aa7.4□□□□□ -1.22
MSH2-204ENST00000461394 STBD1O95210 358 aa7.4□□□□□ -1.22
MSH2-204ENST00000461394 SERPING1P05155 500 aa7.4□□□□□ -1.22
MSH2-204ENST00000461394 HARSP12081 509 aaKnown RBP7.4□□□□□ -1.22
MSH2-204ENST00000461394 ATP4AP20648 1035 aa7.4□□□□□ -1.22
MSH2-204ENST00000461394 FMO5P49326 533 aa7.4□□□□□ -1.22
MSH2-204ENST00000461394 CHMP4BP1P59074 171 aa7.4□□□□□ -1.22
MSH2-204ENST00000461394 IGBP1P78318 339 aa7.4□□□□□ -1.22
MSH2-204ENST00000461394 APBA1Q02410 837 aa7.4□□□□□ -1.22
MSH2-204ENST00000461394 KLHL30Q0D2K2 578 aa7.4□□□□□ -1.22
MSH2-204ENST00000461394 BFSP1Q12934 665 aa7.4□□□□□ -1.22
MSH2-204ENST00000461394 LAMC2Q13753 1193 aa7.4□□□□□ -1.22
MSH2-204ENST00000461394 HSP90AA2PQ14568 343 aaPredicted RBP7.4□□□□□ -1.22
MSH2-204ENST00000461394 FAM110CQ1W6H9 321 aa7.4□□□□□ -1.22
MSH2-204ENST00000461394 ZNF792Q3KQV3 632 aa7.4□□□□□ -1.22
MSH2-204ENST00000461394 CCDC122Q5T0U0 273 aa7.4□□□□□ -1.22
MSH2-204ENST00000461394 WDR59Q6PJI9 974 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 147.2 ms