RNA–Protein interactions for RNA: ENST00000460767.5

SCAMP4-206, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 4

Gene SCAMP4, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-206ENST00000460767 IRAK3Q9Y616 596 aa15.34■□□□□ 0.05
SCAMP4-206ENST00000460767 MYO10Q9HD67 2058 aa15.34■□□□□ 0.05
SCAMP4-206ENST00000460767 RIF1Q5UIP0 2472 aaKnown RBP15.34■□□□□ 0.05
SCAMP4-206ENST00000460767 CARNS1A5YM72 827 aa15.33■□□□□ 0.04
SCAMP4-206ENST00000460767 DDX39AO00148 427 aaKnown RBP15.33■□□□□ 0.04
SCAMP4-206ENST00000460767 ZNF862O60290 1169 aa15.33■□□□□ 0.04
SCAMP4-206ENST00000460767 STBD1O95210 358 aa15.33■□□□□ 0.04
SCAMP4-206ENST00000460767 FGFR1P11362 822 aa15.33■□□□□ 0.04
SCAMP4-206ENST00000460767 SP100P23497 879 aaPredicted RBP15.33■□□□□ 0.04
SCAMP4-206ENST00000460767 KLRC1P26715 233 aa15.33■□□□□ 0.04
SCAMP4-206ENST00000460767 SFNP31947 248 aa15.33■□□□□ 0.04
SCAMP4-206ENST00000460767 CRYBB1P53674 252 aaPredicted RBP15.33■□□□□ 0.04
SCAMP4-206ENST00000460767 LRCH2Q5VUJ6 765 aa15.33■□□□□ 0.04
SCAMP4-206ENST00000460767 LLGL2Q6P1M3 1020 aa15.33■□□□□ 0.04
SCAMP4-206ENST00000460767 LRRC55Q6ZSA7 311 aa15.33■□□□□ 0.04
SCAMP4-206ENST00000460767 FAM228AQ86W67 206 aa15.33■□□□□ 0.04
SCAMP4-206ENST00000460767 SLC39A11Q8N1S5 342 aa15.33■□□□□ 0.04
SCAMP4-206ENST00000460767 CASD1Q96PB1 797 aa15.33■□□□□ 0.04
SCAMP4-206ENST00000460767 NAP1L4Q99733 375 aaKnown RBP15.33■□□□□ 0.04
SCAMP4-206ENST00000460767 TSHZ2Q9NRE2 1034 aa15.33■□□□□ 0.04
SCAMP4-206ENST00000460767 GVINP1Q7Z2Y8 2422 aa15.33■□□□□ 0.04
SCAMP4-206ENST00000460767 WDR64B1ANS9 1081 aa15.32■□□□□ 0.04
SCAMP4-206ENST00000460767 GAS7O60861 476 aa15.32■□□□□ 0.04
SCAMP4-206ENST00000460767 CLASP2O75122 1294 aaKnown RBP15.32■□□□□ 0.04
SCAMP4-206ENST00000460767 GUCY1B3Q02153 619 aa15.32■□□□□ 0.04
SCAMP4-206ENST00000460767 MIS18BP1Q6P0N0 1132 aa15.32■□□□□ 0.04
SCAMP4-206ENST00000460767 TMC7Q7Z402 723 aa15.32■□□□□ 0.04
SCAMP4-206ENST00000460767 POTEDQ86YR6 584 aa15.32■□□□□ 0.04
SCAMP4-206ENST00000460767 ZNF710Q8N1W2 664 aa15.32■□□□□ 0.04
SCAMP4-206ENST00000460767 SNX21Q969T3 373 aa15.32■□□□□ 0.04
SCAMP4-206ENST00000460767 CEP89Q96ST8 783 aa15.32■□□□□ 0.04
SCAMP4-206ENST00000460767 RTP3Q9BQQ7 232 aa15.32■□□□□ 0.04
SCAMP4-206ENST00000460767 APOL5Q9BWW9 433 aa15.32■□□□□ 0.04
SCAMP4-206ENST00000460767 MFSD1Q9H3U5 465 aa15.32■□□□□ 0.04
SCAMP4-206ENST00000460767 SMOC2Q9H3U7 446 aa15.32■□□□□ 0.04
SCAMP4-206ENST00000460767 CDHR5Q9HBB8 845 aa15.32■□□□□ 0.04
SCAMP4-206ENST00000460767 DISC1Q9NRI5 854 aa15.32■□□□□ 0.04
SCAMP4-206ENST00000460767 SPG21Q9NZD8 308 aa15.32■□□□□ 0.04
SCAMP4-206ENST00000460767 CDH22Q9UJ99 828 aa15.32■□□□□ 0.04
SCAMP4-206ENST00000460767 CCNT1O60563 726 aaKnown RBP15.31■□□□□ 0.04
SCAMP4-206ENST00000460767 EOMESO95936 686 aa15.31■□□□□ 0.04
SCAMP4-206ENST00000460767 TRAPPC10P48553 1259 aa15.31■□□□□ 0.04
SCAMP4-206ENST00000460767 TOB1P50616 345 aaPredicted RBP15.31■□□□□ 0.04
SCAMP4-206ENST00000460767 JAK3P52333 1124 aa15.31■□□□□ 0.04
SCAMP4-206ENST00000460767 ORC2Q13416 577 aaPredicted RBP15.31■□□□□ 0.04
SCAMP4-206ENST00000460767 TRIM29Q14134 588 aa15.31■□□□□ 0.04
SCAMP4-206ENST00000460767 GIT2Q14161 759 aa15.31■□□□□ 0.04
SCAMP4-206ENST00000460767 UGCGQ16739 394 aa15.31■□□□□ 0.04
SCAMP4-206ENST00000460767 ZNF484Q5JVG2 852 aa15.31■□□□□ 0.04
SCAMP4-206ENST00000460767 SWSAP1Q6NVH7 229 aa15.31■□□□□ 0.04
SCAMP4-206ENST00000460767 NOSTRINQ8IVI9 506 aa15.31■□□□□ 0.04
SCAMP4-206ENST00000460767 TEKT3Q9BXF9 490 aa15.31■□□□□ 0.04
SCAMP4-206ENST00000460767 ZNF302Q9NR11 478 aa15.31■□□□□ 0.04
SCAMP4-206ENST00000460767 CYP26B1Q9NR63 512 aa15.31■□□□□ 0.04
SCAMP4-206ENST00000460767 EVPLQ92817 2033 aa15.31■□□□□ 0.04
SCAMP4-206ENST00000460767 EML1O00423 815 aa15.3■□□□□ 0.04
SCAMP4-206ENST00000460767 GPR32O75388 356 aa15.3■□□□□ 0.04
SCAMP4-206ENST00000460767 C22orf31O95567 290 aa15.3■□□□□ 0.04
SCAMP4-206ENST00000460767 ASGR2P07307 311 aa15.3■□□□□ 0.04
SCAMP4-206ENST00000460767 PSAPP07602 524 aa15.3■□□□□ 0.04
SCAMP4-206ENST00000460767 DMDP11532 3685 aa15.3■□□□□ 0.04
SCAMP4-206ENST00000460767 NPR3P17342 541 aa15.3■□□□□ 0.04
SCAMP4-206ENST00000460767 GJB2P29033 226 aa15.3■□□□□ 0.04
SCAMP4-206ENST00000460767 BMS1Q14692 1282 aaKnown RBP15.3■□□□□ 0.04
SCAMP4-206ENST00000460767 ANGPT1Q15389 498 aa15.3■□□□□ 0.04
SCAMP4-206ENST00000460767 TARBP2Q15633 366 aaKnown RBP15.3■□□□□ 0.04
SCAMP4-206ENST00000460767 ATAT1Q5SQI0 421 aa15.3■□□□□ 0.04
SCAMP4-206ENST00000460767 FAM160B1Q5W0V3 765 aa15.3■□□□□ 0.04
SCAMP4-206ENST00000460767 LINC01465Q8N7H1 131 aa15.3■□□□□ 0.04
SCAMP4-206ENST00000460767 C4orf32Q8N8J7 132 aa15.3■□□□□ 0.04
SCAMP4-206ENST00000460767 FAM184AQ8NB25 1140 aa15.3■□□□□ 0.04
SCAMP4-206ENST00000460767 BBXQ8WY36 941 aaPredicted RBP15.3■□□□□ 0.04
SCAMP4-206ENST00000460767 INTS4Q96HW7 963 aaKnown RBP15.3■□□□□ 0.04
SCAMP4-206ENST00000460767 MRPL9Q9BYD2 267 aaKnown RBP15.3■□□□□ 0.04
SCAMP4-206ENST00000460767 DUSP12Q9UNI6 340 aa15.3■□□□□ 0.04
SCAMP4-206ENST00000460767 GINS2Q9Y248 185 aa15.3■□□□□ 0.04
SCAMP4-206ENST00000460767 FOSBP53539 338 aa15.29■□□□□ 0.04
SCAMP4-206ENST00000460767 POLGP54098 1239 aaPredicted RBP15.29■□□□□ 0.04
SCAMP4-206ENST00000460767 SAFBQ15424 915 aaKnown RBP eCLIP15.29■□□□□ 0.04
SCAMP4-206ENST00000460767 PDXDC2PQ6P474 469 aa15.29■□□□□ 0.04
SCAMP4-206ENST00000460767 ABI1Q8IZP0 508 aa15.29■□□□□ 0.04
SCAMP4-206ENST00000460767 OSMRQ99650 979 aa15.29■□□□□ 0.04
SCAMP4-206ENST00000460767 ZBP1Q9H171 429 aa15.29■□□□□ 0.04
SCAMP4-206ENST00000460767 TMEM60Q9H2L4 133 aa15.29■□□□□ 0.04
SCAMP4-206ENST00000460767 GABBR1Q9UBS5 961 aa15.29■□□□□ 0.04
SCAMP4-206ENST00000460767 DBR1Q9UK59 544 aaKnown RBP15.29■□□□□ 0.04
SCAMP4-206ENST00000460767 FANCMQ8IYD8 2048 aa15.28■□□□□ 0.04
SCAMP4-206ENST00000460767 TDGQ13569 410 aa15.28■□□□□ 0.04
SCAMP4-206ENST00000460767 KIZQ2M2Z5 673 aa15.28■□□□□ 0.04
SCAMP4-206ENST00000460767 CLLU1OSQ5K130 101 aa15.28■□□□□ 0.04
SCAMP4-206ENST00000460767 ZNF598Q86UK7 904 aaKnown RBP15.28■□□□□ 0.04
SCAMP4-206ENST00000460767 ECHDC2Q86YB7 292 aa15.28■□□□□ 0.04
SCAMP4-206ENST00000460767 SLFN12Q8IYM2 578 aa15.28■□□□□ 0.04
SCAMP4-206ENST00000460767 DTWD2Q8NBA8 298 aa15.28■□□□□ 0.04
SCAMP4-206ENST00000460767 SLC22A17Q8WUG5 538 aa15.28■□□□□ 0.04
SCAMP4-206ENST00000460767 NIFKQ9BYG3 293 aaKnown RBP15.28■□□□□ 0.04
SCAMP4-206ENST00000460767 WRAP73Q9P2S5 460 aaPredicted RBP15.28■□□□□ 0.04
SCAMP4-206ENST00000460767 LIMD1Q9UGP4 676 aa15.28■□□□□ 0.04
SCAMP4-206ENST00000460767 KIF3AQ9Y496 699 aa15.28■□□□□ 0.04
SCAMP4-206ENST00000460767 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms