RNA–Protein interactions for RNA: ENST00000456754.6

TIMP1-205, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 1 (best) BASIC

Gene TIMP1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-205ENST00000456754 CCDC113Q9H0I3 377 aa15.54■□□□□ 0.08
TIMP1-205ENST00000456754 IKZF4Q9H2S9 585 aa15.54■□□□□ 0.08
TIMP1-205ENST00000456754 PRO3102Q9H379 93 aa15.54■□□□□ 0.08
TIMP1-205ENST00000456754 CUEDC2Q9H467 287 aa15.54■□□□□ 0.08
TIMP1-205ENST00000456754 KCND2Q9NZV8 630 aa15.54■□□□□ 0.08
TIMP1-205ENST00000456754 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.53■□□□□ 0.08
TIMP1-205ENST00000456754 ASAP2O43150 1006 aa15.53■□□□□ 0.08
TIMP1-205ENST00000456754 TBCAO75347 108 aaKnown RBP15.53■□□□□ 0.08
TIMP1-205ENST00000456754 FGBP02675 491 aa15.53■□□□□ 0.08
TIMP1-205ENST00000456754 NAMPTP43490 491 aa15.53■□□□□ 0.08
TIMP1-205ENST00000456754 PHKA2P46019 1235 aa15.53■□□□□ 0.08
TIMP1-205ENST00000456754 CASP5P51878 434 aa15.53■□□□□ 0.08
TIMP1-205ENST00000456754 UBE2HP62256 183 aa15.53■□□□□ 0.08
TIMP1-205ENST00000456754 ASIC1P78348 528 aa15.53■□□□□ 0.08
TIMP1-205ENST00000456754 DEFB103AP81534 67 aa15.53■□□□□ 0.08
TIMP1-205ENST00000456754 TFDP1Q14186 410 aa15.53■□□□□ 0.08
TIMP1-205ENST00000456754 ODR4Q5SWX8 454 aa15.53■□□□□ 0.08
TIMP1-205ENST00000456754 FAM109BQ6ICB4 259 aaPredicted RBP15.53■□□□□ 0.08
TIMP1-205ENST00000456754 CNKSR3Q6P9H4 555 aa15.53■□□□□ 0.08
TIMP1-205ENST00000456754 CNNM3Q8NE01 707 aa15.53■□□□□ 0.08
TIMP1-205ENST00000456754 DEPTORQ8TB45 409 aa15.53■□□□□ 0.08
TIMP1-205ENST00000456754 SEPT8Q92599 483 aa15.53■□□□□ 0.08
TIMP1-205ENST00000456754 GBP4Q96PP9 640 aa15.53■□□□□ 0.08
TIMP1-205ENST00000456754 C7orf25Q9BPX7 421 aa15.53■□□□□ 0.08
TIMP1-205ENST00000456754 KMT5AQ9NQR1 393 aa15.53■□□□□ 0.08
TIMP1-205ENST00000456754 ODF2LQ9ULJ1 636 aa15.53■□□□□ 0.08
TIMP1-205ENST00000456754 COLQQ9Y215 455 aaPredicted RBP15.53■□□□□ 0.08
TIMP1-205ENST00000456754 KLRC4O43908 158 aa15.52■□□□□ 0.08
TIMP1-205ENST00000456754 TSPAN1O60635 241 aa15.52■□□□□ 0.08
TIMP1-205ENST00000456754 RPLP2P05387 115 aaKnown RBP15.52■□□□□ 0.08
TIMP1-205ENST00000456754 COASYQ13057 564 aa15.52■□□□□ 0.08
TIMP1-205ENST00000456754 DMP1Q13316 513 aaPredicted RBP15.52■□□□□ 0.08
TIMP1-205ENST00000456754 PNOCQ13519 176 aa15.52■□□□□ 0.08
TIMP1-205ENST00000456754 DSC3Q14574 896 aa15.52■□□□□ 0.08
TIMP1-205ENST00000456754 ZC2HC1CQ53FD0 456 aaPredicted RBP15.52■□□□□ 0.08
TIMP1-205ENST00000456754 CATSPER4Q7RTX7 472 aa15.52■□□□□ 0.08
TIMP1-205ENST00000456754 SRGAP1Q7Z6B7 1085 aa15.52■□□□□ 0.08
TIMP1-205ENST00000456754 IFNLR1Q8IU57 520 aaPredicted RBP15.52■□□□□ 0.08
TIMP1-205ENST00000456754 RPUSD2Q8IZ73 545 aaKnown RBP15.52■□□□□ 0.08
TIMP1-205ENST00000456754 TMEM161BQ8NDZ6 487 aa15.52■□□□□ 0.08
TIMP1-205ENST00000456754 IFT74Q96LB3 600 aa15.52■□□□□ 0.08
TIMP1-205ENST00000456754 TIPINQ9BVW5 301 aa15.52■□□□□ 0.08
TIMP1-205ENST00000456754 PARVGQ9HBI0 331 aa15.52■□□□□ 0.08
TIMP1-205ENST00000456754 PANK4Q9NVE7 773 aa15.52■□□□□ 0.08
TIMP1-205ENST00000456754 DACT1Q9NYF0 836 aa15.52■□□□□ 0.08
TIMP1-205ENST00000456754 ARHGAP28Q9P2N2 729 aa15.52■□□□□ 0.08
TIMP1-205ENST00000456754 GBF1Q92538 1859 aa15.52■□□□□ 0.07
TIMP1-205ENST00000456754 TRIOBPQ9H2D6 2365 aa15.51■□□□□ 0.07
TIMP1-205ENST00000456754 FRMD3A2A2Y4 597 aa15.51■□□□□ 0.07
TIMP1-205ENST00000456754 ZBBXA8MT70 800 aa15.51■□□□□ 0.07
TIMP1-205ENST00000456754 GRXCR1A8MXD5 290 aa15.51■□□□□ 0.07
TIMP1-205ENST00000456754 K7ENM7 598 aa15.51■□□□□ 0.07
TIMP1-205ENST00000456754 MYBP10242 640 aa15.51■□□□□ 0.07
TIMP1-205ENST00000456754 HOXA11P31270 313 aaPredicted RBP15.51■□□□□ 0.07
TIMP1-205ENST00000456754 NCKAP1LP55160 1127 aa15.51■□□□□ 0.07
TIMP1-205ENST00000456754 WDR5P61964 334 aaKnown RBP15.51■□□□□ 0.07
TIMP1-205ENST00000456754 NT5DC1Q5TFE4 455 aa15.51■□□□□ 0.07
TIMP1-205ENST00000456754 PSRC1Q6PGN9 363 aaPredicted RBP15.51■□□□□ 0.07
TIMP1-205ENST00000456754 GPT2Q8TD30 523 aa15.51■□□□□ 0.07
TIMP1-205ENST00000456754 HERVK_113Q902F9 699 aa15.51■□□□□ 0.07
TIMP1-205ENST00000456754 ADAM2Q99965 735 aa15.51■□□□□ 0.07
TIMP1-205ENST00000456754 FZD8Q9H461 694 aa15.51■□□□□ 0.07
TIMP1-205ENST00000456754 PIN4Q9Y237 131 aaKnown RBP15.51■□□□□ 0.07
TIMP1-205ENST00000456754 SQORQ9Y6N5 450 aa15.51■□□□□ 0.07
TIMP1-205ENST00000456754 DENND3A2RUS2 1198 aa15.5■□□□□ 0.07
TIMP1-205ENST00000456754 ENPP3O14638 875 aa15.5■□□□□ 0.07
TIMP1-205ENST00000456754 GPR182O15218 404 aa15.5■□□□□ 0.07
TIMP1-205ENST00000456754 GTPBP6O43824 516 aaPredicted RBP15.5■□□□□ 0.07
TIMP1-205ENST00000456754 TRAK2O60296 914 aa15.5■□□□□ 0.07
TIMP1-205ENST00000456754 PARNO95453 639 aaKnown RBP15.5■□□□□ 0.07
TIMP1-205ENST00000456754 PRKCBP05771 671 aa15.5■□□□□ 0.07
TIMP1-205ENST00000456754 PFKMP08237 780 aa15.5■□□□□ 0.07
TIMP1-205ENST00000456754 MAPTP10636 758 aaKnown RBP15.5■□□□□ 0.07
TIMP1-205ENST00000456754 ARF4P18085 180 aaPredicted RBP15.5■□□□□ 0.07
TIMP1-205ENST00000456754 SFPQP23246 707 aaKnown RBP eCLIP15.5■□□□□ 0.07
TIMP1-205ENST00000456754 CDC42EP1Q00587 391 aa15.5■□□□□ 0.07
TIMP1-205ENST00000456754 POU5F1BQ06416 359 aa15.5■□□□□ 0.07
TIMP1-205ENST00000456754 KCNA1Q09470 495 aa15.5■□□□□ 0.07
TIMP1-205ENST00000456754 DPYDQ12882 1025 aa15.5■□□□□ 0.07
TIMP1-205ENST00000456754 PPP2R5AQ15172 486 aa15.5■□□□□ 0.07
TIMP1-205ENST00000456754 HERC4Q5GLZ8 1057 aaPredicted RBP15.5■□□□□ 0.07
TIMP1-205ENST00000456754 UBXN11Q5T124 520 aa15.5■□□□□ 0.07
TIMP1-205ENST00000456754 RASIP1Q5U651 963 aa15.5■□□□□ 0.07
TIMP1-205ENST00000456754 EEF1DP3Q658K8 133 aa15.5■□□□□ 0.07
TIMP1-205ENST00000456754 FAM117BQ6P1L5 589 aa15.5■□□□□ 0.07
TIMP1-205ENST00000456754 HAUS6Q7Z4H7 955 aa15.5■□□□□ 0.07
TIMP1-205ENST00000456754 USP38Q8NB14 1042 aa15.5■□□□□ 0.07
TIMP1-205ENST00000456754 SPIRE2Q8WWL2 714 aa15.5■□□□□ 0.07
TIMP1-205ENST00000456754 RNPC3Q96LT9 517 aaKnown RBP15.5■□□□□ 0.07
TIMP1-205ENST00000456754 PYM1Q9BRP8 204 aaKnown RBP15.5■□□□□ 0.07
TIMP1-205ENST00000456754 NFKBIZQ9BYH8 718 aa15.5■□□□□ 0.07
TIMP1-205ENST00000456754 MAGEF1Q9HAY2 307 aa15.5■□□□□ 0.07
TIMP1-205ENST00000456754 AGPAT5Q9NUQ2 364 aa15.5■□□□□ 0.07
TIMP1-205ENST00000456754 USP25Q9UHP3 1055 aa15.5■□□□□ 0.07
TIMP1-205ENST00000456754 TTC3P53804 2025 aa15.5■□□□□ 0.07
TIMP1-205ENST00000456754 TISP43B9A030 160 aa15.49■□□□□ 0.07
TIMP1-205ENST00000456754 BMP8BP34820 402 aa15.49■□□□□ 0.07
TIMP1-205ENST00000456754 GATMP50440 423 aa15.49■□□□□ 0.07
TIMP1-205ENST00000456754 EHHADHQ08426 723 aa15.49■□□□□ 0.07
TIMP1-205ENST00000456754 IKBKEQ14164 716 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms