RNA–Protein interactions for RNA: ENST00000455661.5

PTPRE-204, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 2

Gene PTPRE, Length 2,304 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-204ENST00000455661 MTUS1Q9ULD2 1270 aa14.77□□□□□ -0.04
PTPRE-204ENST00000455661 DNM3Q9UQ16 869 aa14.77□□□□□ -0.04
PTPRE-204ENST00000455661 ALG6Q9Y672 507 aa14.77□□□□□ -0.04
PTPRE-204ENST00000455661 PASKQ96RG2 1323 aa14.77□□□□□ -0.04
PTPRE-204ENST00000455661 MED24O75448 989 aa14.77□□□□□ -0.05
PTPRE-204ENST00000455661 TRHP20396 242 aaPredicted RBP14.77□□□□□ -0.05
PTPRE-204ENST00000455661 HOXD13P35453 343 aa14.77□□□□□ -0.05
PTPRE-204ENST00000455661 PDE6BP35913 854 aa14.77□□□□□ -0.05
PTPRE-204ENST00000455661 CASP4P49662 377 aa14.77□□□□□ -0.05
PTPRE-204ENST00000455661 TXNRD3Q86VQ6 643 aa14.77□□□□□ -0.05
PTPRE-204ENST00000455661 FITM2Q8N6M3 262 aa14.77□□□□□ -0.05
PTPRE-204ENST00000455661 CKAP2Q8WWK9 683 aa14.77□□□□□ -0.05
PTPRE-204ENST00000455661 ARHGEF26Q96DR7 871 aa14.77□□□□□ -0.05
PTPRE-204ENST00000455661 UIMC1Q96RL1 719 aa14.77□□□□□ -0.05
PTPRE-204ENST00000455661 GPCPD1Q9NPB8 672 aa14.77□□□□□ -0.05
PTPRE-204ENST00000455661 LOC102724428A0A0B4J2F2 783 aa14.76□□□□□ -0.05
PTPRE-204ENST00000455661 POTEFA5A3E0 1075 aa14.76□□□□□ -0.05
PTPRE-204ENST00000455661 CLIC2O15247 247 aa14.76□□□□□ -0.05
PTPRE-204ENST00000455661 POTEIP0CG38 1075 aa14.76□□□□□ -0.05
PTPRE-204ENST00000455661 CDC25CP30307 473 aa14.76□□□□□ -0.05
PTPRE-204ENST00000455661 SIK1P57059 783 aa14.76□□□□□ -0.05
PTPRE-204ENST00000455661 LONRF1Q17RB8 773 aa14.76□□□□□ -0.05
PTPRE-204ENST00000455661 UBAP2Q5T6F2 1119 aaKnown RBP14.76□□□□□ -0.05
PTPRE-204ENST00000455661 POTEGQ6S5H5 508 aa14.76□□□□□ -0.05
PTPRE-204ENST00000455661 POTEEQ6S8J3 1075 aa14.76□□□□□ -0.05
PTPRE-204ENST00000455661 OTUD6AQ7L8S5 288 aa14.76□□□□□ -0.05
PTPRE-204ENST00000455661 SLFN12Q8IYM2 578 aa14.76□□□□□ -0.05
PTPRE-204ENST00000455661 ANKRD42Q8N9B4 389 aa14.76□□□□□ -0.05
PTPRE-204ENST00000455661 ERMNQ8TAM6 284 aa14.76□□□□□ -0.05
PTPRE-204ENST00000455661 FBF1Q8TES7 1133 aa14.76□□□□□ -0.05
PTPRE-204ENST00000455661 PSTPIP2Q9H939 334 aa14.76□□□□□ -0.05
PTPRE-204ENST00000455661 PNMA3Q9UL41 463 aa14.76□□□□□ -0.05
PTPRE-204ENST00000455661 GCNT3O95395 438 aa14.76□□□□□ -0.05
PTPRE-204ENST00000455661 NOVP48745 357 aa14.76□□□□□ -0.05
PTPRE-204ENST00000455661 MKRN4PQ13434 485 aaPredicted RBP14.76□□□□□ -0.05
PTPRE-204ENST00000455661 SLC10A5Q5PT55 438 aa14.76□□□□□ -0.05
PTPRE-204ENST00000455661 C11orf63Q6NUN7 778 aa14.76□□□□□ -0.05
PTPRE-204ENST00000455661 AADACL2Q6P093 401 aa14.76□□□□□ -0.05
PTPRE-204ENST00000455661 BICDL1Q6ZP65 573 aa14.76□□□□□ -0.05
PTPRE-204ENST00000455661 SYT2Q8N9I0 419 aaPredicted RBP14.76□□□□□ -0.05
PTPRE-204ENST00000455661 NAF1Q96HR8 494 aaKnown RBP14.76□□□□□ -0.05
PTPRE-204ENST00000455661 NLRP3Q96P20 1036 aa14.76□□□□□ -0.05
PTPRE-204ENST00000455661 REEP2Q9BRK0 252 aa14.76□□□□□ -0.05
PTPRE-204ENST00000455661 TXLNGQ9NUQ3 528 aa14.76□□□□□ -0.05
PTPRE-204ENST00000455661 USP40Q9NVE5 1235 aa14.76□□□□□ -0.05
PTPRE-204ENST00000455661 CTTNBP2NLQ9P2B4 639 aa14.76□□□□□ -0.05
PTPRE-204ENST00000455661 PRKAG3Q9UGI9 489 aa14.76□□□□□ -0.05
PTPRE-204ENST00000455661 RTCBQ9Y3I0 505 aaKnown RBP14.76□□□□□ -0.05
PTPRE-204ENST00000455661 ASTN1O14525 1302 aa14.75□□□□□ -0.05
PTPRE-204ENST00000455661 ALAS1P13196 640 aa14.75□□□□□ -0.05
PTPRE-204ENST00000455661 CCNB1P14635 433 aa14.75□□□□□ -0.05
PTPRE-204ENST00000455661 PSMC2P35998 433 aaKnown RBP14.75□□□□□ -0.05
PTPRE-204ENST00000455661 HADHBP55084 474 aaKnown RBP14.75□□□□□ -0.05
PTPRE-204ENST00000455661 PABPC4Q13310 644 aaKnown RBP eCLIP14.75□□□□□ -0.05
PTPRE-204ENST00000455661 BMT2Q1RMZ1 405 aa14.75□□□□□ -0.05
PTPRE-204ENST00000455661 AP1ARQ63HQ0 302 aa14.75□□□□□ -0.05
PTPRE-204ENST00000455661 RNF43Q68DV7 783 aa14.75□□□□□ -0.05
PTPRE-204ENST00000455661 TTC27Q6P3X3 843 aa14.75□□□□□ -0.05
PTPRE-204ENST00000455661 FAM186BQ8IYM0 893 aa14.75□□□□□ -0.05
PTPRE-204ENST00000455661 GRAMD1AQ96CP6 724 aa14.75□□□□□ -0.05
PTPRE-204ENST00000455661 TGS1Q96RS0 853 aaKnown RBP14.75□□□□□ -0.05
PTPRE-204ENST00000455661 JMJD4Q9H9V9 463 aa14.75□□□□□ -0.05
PTPRE-204ENST00000455661 ZFATQ9P243 1243 aa14.75□□□□□ -0.05
PTPRE-204ENST00000455661 COG5Q9UP83 839 aa14.75□□□□□ -0.05
PTPRE-204ENST00000455661 PCDHA3Q9Y5H8 950 aa14.75□□□□□ -0.05
PTPRE-204ENST00000455661 PFASO15067 1338 aa14.75□□□□□ -0.05
PTPRE-204ENST00000455661 TULP1O00294 542 aaPredicted RBP14.75□□□□□ -0.05
PTPRE-204ENST00000455661 TBCAO75347 108 aaKnown RBP14.75□□□□□ -0.05
PTPRE-204ENST00000455661 TTLL1O95922 423 aa14.75□□□□□ -0.05
PTPRE-204ENST00000455661 STX2P32856 288 aa14.75□□□□□ -0.05
PTPRE-204ENST00000455661 COILP38432 576 aaPredicted RBP14.75□□□□□ -0.05
PTPRE-204ENST00000455661 STAT3P40763 770 aa14.75□□□□□ -0.05
PTPRE-204ENST00000455661 BTDP43251 543 aa14.75□□□□□ -0.05
PTPRE-204ENST00000455661 CCDC15Q0P6D6 951 aa14.75□□□□□ -0.05
PTPRE-204ENST00000455661 ITPK1Q13572 414 aa14.75□□□□□ -0.05
PTPRE-204ENST00000455661 ADGRF4Q8IZF3 695 aa14.75□□□□□ -0.05
PTPRE-204ENST00000455661 OLIG1Q8TAK6 271 aa14.75□□□□□ -0.05
PTPRE-204ENST00000455661 ZSWIM1Q9BR11 485 aa14.75□□□□□ -0.05
PTPRE-204ENST00000455661 ETNK1Q9HBU6 452 aa14.75□□□□□ -0.05
PTPRE-204ENST00000455661 PTPN22Q9Y2R2 807 aa14.75□□□□□ -0.05
PTPRE-204ENST00000455661 TMEM110-MUSTN1A8MSY1 372 aa14.74□□□□□ -0.05
PTPRE-204ENST00000455661 ATP5HO75947 161 aa14.74□□□□□ -0.05
PTPRE-204ENST00000455661 RFC4P35249 363 aa14.74□□□□□ -0.05
PTPRE-204ENST00000455661 VSTM1Q6UX27 236 aa14.74□□□□□ -0.05
PTPRE-204ENST00000455661 ARHGEF18Q6ZSZ5 1173 aa14.74□□□□□ -0.05
PTPRE-204ENST00000455661 CATSPER3Q86XQ3 398 aa14.74□□□□□ -0.05
PTPRE-204ENST00000455661 LRRC47Q8N1G4 583 aaKnown RBP14.74□□□□□ -0.05
PTPRE-204ENST00000455661 GDAP1Q8TB36 358 aa14.74□□□□□ -0.05
PTPRE-204ENST00000455661 RPS6KC1Q96S38 1066 aa14.74□□□□□ -0.05
PTPRE-204ENST00000455661 SYT11Q9BT88 431 aa14.74□□□□□ -0.05
PTPRE-204ENST00000455661 FAM167BQ9BTA0 163 aa14.74□□□□□ -0.05
PTPRE-204ENST00000455661 OSBPL1AQ9BXW6 950 aa14.74□□□□□ -0.05
PTPRE-204ENST00000455661 YIPF3Q9GZM5 350 aa14.74□□□□□ -0.05
PTPRE-204ENST00000455661 CDC42EP4Q9H3Q1 356 aaKnown RBP14.74□□□□□ -0.05
PTPRE-204ENST00000455661 TRIM33Q9UPN9 1127 aa14.74□□□□□ -0.05
PTPRE-204ENST00000455661 ABCA3Q99758 1704 aa14.74□□□□□ -0.05
PTPRE-204ENST00000455661 STRCP1A6NGW2 1772 aa14.74□□□□□ -0.05
PTPRE-204ENST00000455661 A6NHS1 94 aa14.74□□□□□ -0.05
PTPRE-204ENST00000455661 ENO4A6NNW6 628 aa14.74□□□□□ -0.05
PTPRE-204ENST00000455661 E7ENQ6 273 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms