RNA–Protein interactions for RNA: ENST00000454635.6

LINC00963-207, long intergenic non-protein coding RNA 963, humanhuman

TSL 5 BASIC

Gene LINC00963, Length 910 nt, Biotype lincRNA, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-207ENST00000454635 ZNF174Q15697 407 aa11.77□□□□□ -0.53
LINC00963-207ENST00000454635 NOTUMQ6P988 496 aa11.77□□□□□ -0.53
LINC00963-207ENST00000454635 KLHL23Q8NBE8 558 aa11.77□□□□□ -0.53
LINC00963-207ENST00000454635 RNF169Q8NCN4 708 aa11.77□□□□□ -0.53
LINC00963-207ENST00000454635 URGCPQ8TCY9 931 aa11.77□□□□□ -0.53
LINC00963-207ENST00000454635 ADAMTS19Q8TE59 1207 aa11.77□□□□□ -0.53
LINC00963-207ENST00000454635 TMEM143Q96AN5 459 aa11.77□□□□□ -0.53
LINC00963-207ENST00000454635 INTS4Q96HW7 963 aaKnown RBP11.77□□□□□ -0.53
LINC00963-207ENST00000454635 ZNF558Q96NG5 402 aa11.77□□□□□ -0.53
LINC00963-207ENST00000454635 UHRF1Q96T88 793 aaPredicted RBP11.77□□□□□ -0.53
LINC00963-207ENST00000454635 C2orf40Q9H1Z8 148 aa11.77□□□□□ -0.53
LINC00963-207ENST00000454635 IFT122Q9HBG6 1241 aa11.77□□□□□ -0.53
LINC00963-207ENST00000454635 PRDM6Q9NQX0 595 aa11.77□□□□□ -0.53
LINC00963-207ENST00000454635 FAM105AQ9NUU6 356 aa11.77□□□□□ -0.53
LINC00963-207ENST00000454635 LRWD1Q9UFC0 647 aa11.77□□□□□ -0.53
LINC00963-207ENST00000454635 PLAGL2Q9UPG8 496 aa11.77□□□□□ -0.53
LINC00963-207ENST00000454635 PHLPP2Q6ZVD8 1323 aa11.77□□□□□ -0.53
LINC00963-207ENST00000454635 BDP1A6H8Y1 2624 aa11.76□□□□□ -0.53
LINC00963-207ENST00000454635 C5orf42Q9H799 3197 aa11.76□□□□□ -0.53
LINC00963-207ENST00000454635 ARHGEF35A5YM69 484 aa11.76□□□□□ -0.53
LINC00963-207ENST00000454635 K7ELQ4 463 aaPredicted RBP11.76□□□□□ -0.53
LINC00963-207ENST00000454635 TNFRSF10AO00220 468 aa11.76□□□□□ -0.53
LINC00963-207ENST00000454635 ZNF623O75123 536 aa11.76□□□□□ -0.53
LINC00963-207ENST00000454635 BMP15O95972 392 aa11.76□□□□□ -0.53
LINC00963-207ENST00000454635 ALDH7A1P49419 539 aaKnown RBP11.76□□□□□ -0.53
LINC00963-207ENST00000454635 RNASELQ05823 741 aaKnown RBP11.76□□□□□ -0.53
LINC00963-207ENST00000454635 FAM102BQ5T8I3 360 aa11.76□□□□□ -0.53
LINC00963-207ENST00000454635 KRT79Q5XKE5 535 aa11.76□□□□□ -0.53
LINC00963-207ENST00000454635 DTHD1Q6ZMT9 781 aa11.76□□□□□ -0.53
LINC00963-207ENST00000454635 CATSPER3Q86XQ3 398 aa11.76□□□□□ -0.53
LINC00963-207ENST00000454635 IFNLR1Q8IU57 520 aaPredicted RBP11.76□□□□□ -0.53
LINC00963-207ENST00000454635 ZBTB8OSQ8IWT0 167 aa11.76□□□□□ -0.53
LINC00963-207ENST00000454635 COLGALT1Q8NBJ5 622 aa11.76□□□□□ -0.53
LINC00963-207ENST00000454635 POF1BQ8WVV4 589 aa11.76□□□□□ -0.53
LINC00963-207ENST00000454635 ZNF668Q96K58 619 aaPredicted RBP11.76□□□□□ -0.53
LINC00963-207ENST00000454635 PRIMPOLQ96LW4 560 aa11.76□□□□□ -0.53
LINC00963-207ENST00000454635 CDCA3Q99618 268 aaPredicted RBP11.76□□□□□ -0.53
LINC00963-207ENST00000454635 TRIM6Q9C030 488 aaPredicted RBP11.76□□□□□ -0.53
LINC00963-207ENST00000454635 NT5C3AQ9H0P0 336 aa11.76□□□□□ -0.53
LINC00963-207ENST00000454635 TMEM60Q9H2L4 133 aa11.76□□□□□ -0.53
LINC00963-207ENST00000454635 TLR9Q9NR96 1032 aa11.76□□□□□ -0.53
LINC00963-207ENST00000454635 TYW1Q9NV66 732 aaKnown RBP11.76□□□□□ -0.53
LINC00963-207ENST00000454635 KANSL3Q9P2N6 904 aa11.76□□□□□ -0.53
LINC00963-207ENST00000454635 ZMYM2Q9UBW7 1377 aa11.76□□□□□ -0.53
LINC00963-207ENST00000454635 TTC28Q96AY4 2481 aa11.75□□□□□ -0.53
LINC00963-207ENST00000454635 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.75□□□□□ -0.53
LINC00963-207ENST00000454635 INO80B-WBP1J3KQ70 363 aa11.75□□□□□ -0.53
LINC00963-207ENST00000454635 GRM6O15303 877 aa11.75□□□□□ -0.53
LINC00963-207ENST00000454635 USO1O60763 962 aaKnown RBP11.75□□□□□ -0.53
LINC00963-207ENST00000454635 FGF18O76093 207 aa11.75□□□□□ -0.53
LINC00963-207ENST00000454635 ITGB1P05556 798 aa11.75□□□□□ -0.53
LINC00963-207ENST00000454635 FGFR1P11362 822 aa11.75□□□□□ -0.53
LINC00963-207ENST00000454635 FGFR4P22455 802 aa11.75□□□□□ -0.53
LINC00963-207ENST00000454635 KCNA5P22460 613 aa11.75□□□□□ -0.53
LINC00963-207ENST00000454635 CCT6AP40227 531 aaKnown RBP11.75□□□□□ -0.53
LINC00963-207ENST00000454635 PTENP60484 403 aa11.75□□□□□ -0.53
LINC00963-207ENST00000454635 PLCB3Q01970 1234 aa11.75□□□□□ -0.53
LINC00963-207ENST00000454635 TFF2Q03403 129 aa11.75□□□□□ -0.53
LINC00963-207ENST00000454635 PTGDRQ13258 359 aa11.75□□□□□ -0.53
LINC00963-207ENST00000454635 LEXMQ3ZCV2 418 aa11.75□□□□□ -0.53
LINC00963-207ENST00000454635 TCEAL5Q5H9L2 206 aa11.75□□□□□ -0.53
LINC00963-207ENST00000454635 ARL6IP4Q66PJ3 421 aaKnown RBP11.75□□□□□ -0.53
LINC00963-207ENST00000454635 KCNT2Q6UVM3 1135 aa11.75□□□□□ -0.53
LINC00963-207ENST00000454635 BRAPQ7Z569 592 aa11.75□□□□□ -0.53
LINC00963-207ENST00000454635 APBB1IPQ7Z5R6 666 aaPredicted RBP11.75□□□□□ -0.53
LINC00963-207ENST00000454635 ZNF598Q86UK7 904 aaKnown RBP11.75□□□□□ -0.53
LINC00963-207ENST00000454635 KSR1Q8IVT5 923 aa11.75□□□□□ -0.53
LINC00963-207ENST00000454635 IGSF22Q8N9C0 903 aa11.75□□□□□ -0.53
LINC00963-207ENST00000454635 PIGOQ8TEQ8 1089 aa11.75□□□□□ -0.53
LINC00963-207ENST00000454635 TMEM169Q96HH4 297 aa11.75□□□□□ -0.53
LINC00963-207ENST00000454635 IFT74Q96LB3 600 aa11.75□□□□□ -0.53
LINC00963-207ENST00000454635 CASD1Q96PB1 797 aa11.75□□□□□ -0.53
LINC00963-207ENST00000454635 FAM193BQ96PV7 902 aaPredicted RBP11.75□□□□□ -0.53
LINC00963-207ENST00000454635 ALG13Q9NP73 1137 aaKnown RBP11.75□□□□□ -0.53
LINC00963-207ENST00000454635 NGRNQ9NPE2 291 aaKnown RBP11.75□□□□□ -0.53
LINC00963-207ENST00000454635 BMP2KQ9NSY1 1161 aaPredicted RBP11.75□□□□□ -0.53
LINC00963-207ENST00000454635 PRMT7Q9NVM4 692 aaPredicted RBP11.75□□□□□ -0.53
LINC00963-207ENST00000454635 CLDND1Q9NY35 253 aa11.75□□□□□ -0.53
LINC00963-207ENST00000454635 KCNG1Q9UIX4 513 aa11.75□□□□□ -0.53
LINC00963-207ENST00000454635 LRRIQ4A6NIV6 560 aa11.74□□□□□ -0.53
LINC00963-207ENST00000454635 WNT7AO00755 349 aa11.74□□□□□ -0.53
LINC00963-207ENST00000454635 SPATA31C1P0DKV0 1188 aa11.74□□□□□ -0.53
LINC00963-207ENST00000454635 CAPSQ13938 189 aa11.74□□□□□ -0.53
LINC00963-207ENST00000454635 GIT2Q14161 759 aa11.74□□□□□ -0.53
LINC00963-207ENST00000454635 COL19A1Q14993 1142 aa11.74□□□□□ -0.53
LINC00963-207ENST00000454635 LARP1BQ659C4 914 aaKnown RBP11.74□□□□□ -0.53
LINC00963-207ENST00000454635 POTEGQ6S5H5 508 aa11.74□□□□□ -0.53
LINC00963-207ENST00000454635 EP400NLQ6ZTU2 488 aa11.74□□□□□ -0.53
LINC00963-207ENST00000454635 SPPL3Q8TCT6 385 aa11.74□□□□□ -0.53
LINC00963-207ENST00000454635 HELQQ8TDG4 1101 aa11.74□□□□□ -0.53
LINC00963-207ENST00000454635 MICAL1Q8TDZ2 1067 aa11.74□□□□□ -0.53
LINC00963-207ENST00000454635 SNX29Q8TEQ0 813 aa11.74□□□□□ -0.53
LINC00963-207ENST00000454635 MRPS27Q92552 414 aaKnown RBP11.74□□□□□ -0.53
LINC00963-207ENST00000454635 KIFAP3Q92845 792 aa11.74□□□□□ -0.53
LINC00963-207ENST00000454635 CDK5RAP3Q96JB5 506 aa11.74□□□□□ -0.53
LINC00963-207ENST00000454635 POP1Q99575 1024 aaKnown RBP11.74□□□□□ -0.53
LINC00963-207ENST00000454635 TIPINQ9BVW5 301 aa11.74□□□□□ -0.53
LINC00963-207ENST00000454635 POLR3FQ9H1D9 316 aaPredicted RBP11.74□□□□□ -0.53
LINC00963-207ENST00000454635 CWH43Q9H720 699 aa11.74□□□□□ -0.53
LINC00963-207ENST00000454635 XPNPEP1Q9NQW7 623 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms