RNA–Protein interactions for RNA: ENST00000454350.5

UBE2D4-208, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 2

Gene UBE2D4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-208ENST00000454350 SLC7A3Q8WY07 619 aa20.7■□□□□ 0.9
UBE2D4-208ENST00000454350 SUSD6Q92537 303 aa20.7■□□□□ 0.9
UBE2D4-208ENST00000454350 MTMR9Q96QG7 549 aa20.7■□□□□ 0.9
UBE2D4-208ENST00000454350 XPNPEP1Q9NQW7 623 aa20.7■□□□□ 0.9
UBE2D4-208ENST00000454350 AGPAT5Q9NUQ2 364 aa20.7■□□□□ 0.9
UBE2D4-208ENST00000454350 PIN4Q9Y237 131 aaKnown RBP20.7■□□□□ 0.9
UBE2D4-208ENST00000454350 USP15Q9Y4E8 981 aaPredicted RBP20.7■□□□□ 0.9
UBE2D4-208ENST00000454350 TDRD15B5MCY1 1934 aaKnown RBP20.7■□□□□ 0.9
UBE2D4-208ENST00000454350 B4GALT3O60512 393 aa20.69■□□□□ 0.9
UBE2D4-208ENST00000454350 HOXA11P31270 313 aaPredicted RBP20.69■□□□□ 0.9
UBE2D4-208ENST00000454350 POLGP54098 1239 aaPredicted RBP20.69■□□□□ 0.9
UBE2D4-208ENST00000454350 BCAR1P56945 870 aa20.69■□□□□ 0.9
UBE2D4-208ENST00000454350 CYP4A11Q02928 519 aa20.69■□□□□ 0.9
UBE2D4-208ENST00000454350 LAMTOR4Q0VGL1 99 aa20.69■□□□□ 0.9
UBE2D4-208ENST00000454350 LONRF3Q496Y0 759 aa20.69■□□□□ 0.9
UBE2D4-208ENST00000454350 UBXN11Q5T124 520 aa20.69■□□□□ 0.9
UBE2D4-208ENST00000454350 CATSPER4Q7RTX7 472 aa20.69■□□□□ 0.9
UBE2D4-208ENST00000454350 TMEM173Q86WV6 379 aaPredicted RBP20.69■□□□□ 0.9
UBE2D4-208ENST00000454350 DIS3L2Q8IYB7 885 aaKnown RBP20.69■□□□□ 0.9
UBE2D4-208ENST00000454350 PSPC1Q8WXF1 523 aaKnown RBP20.69■□□□□ 0.9
UBE2D4-208ENST00000454350 S1PR5Q9H228 398 aa20.69■□□□□ 0.9
UBE2D4-208ENST00000454350 ZSWIM4Q9H7M6 989 aa20.69■□□□□ 0.9
UBE2D4-208ENST00000454350 BMP2KQ9NSY1 1161 aaPredicted RBP20.69■□□□□ 0.9
UBE2D4-208ENST00000454350 PUF60Q9UHX1 559 aaKnown RBP20.69■□□□□ 0.9
UBE2D4-208ENST00000454350 PRR33A8MZF0 331 aa20.68■□□□□ 0.9
UBE2D4-208ENST00000454350 LOC730098B7Z3J9 87 aa20.68■□□□□ 0.9
UBE2D4-208ENST00000454350 NT5C1B-RDH14C9J2C7 533 aa20.68■□□□□ 0.9
UBE2D4-208ENST00000454350 OFD1O75665 1012 aa20.68■□□□□ 0.9
UBE2D4-208ENST00000454350 LYPLA2O95372 231 aa20.68■□□□□ 0.9
UBE2D4-208ENST00000454350 EMC2Q15006 297 aa20.68■□□□□ 0.9
UBE2D4-208ENST00000454350 SYCE2Q6PIF2 218 aa20.68■□□□□ 0.9
UBE2D4-208ENST00000454350 AGMOQ6ZNB7 445 aa20.68■□□□□ 0.9
UBE2D4-208ENST00000454350 SRGAP1Q7Z6B7 1085 aa20.68■□□□□ 0.9
UBE2D4-208ENST00000454350 FERMT3Q86UX7 667 aa20.68■□□□□ 0.9
UBE2D4-208ENST00000454350 RNF135Q8IUD6 432 aa20.68■□□□□ 0.9
UBE2D4-208ENST00000454350 EXOC8Q8IYI6 725 aa20.68■□□□□ 0.9
UBE2D4-208ENST00000454350 POP1Q99575 1024 aaKnown RBP20.68■□□□□ 0.9
UBE2D4-208ENST00000454350 EIF2AK1Q9BQI3 630 aaKnown RBP20.68■□□□□ 0.9
UBE2D4-208ENST00000454350 MRPL9Q9BYD2 267 aaKnown RBP20.68■□□□□ 0.9
UBE2D4-208ENST00000454350 NRDE2Q9H7Z3 1164 aa20.68■□□□□ 0.9
UBE2D4-208ENST00000454350 NGRNQ9NPE2 291 aaKnown RBP20.68■□□□□ 0.9
UBE2D4-208ENST00000454350 TBC1D13Q9NVG8 400 aa20.68■□□□□ 0.9
UBE2D4-208ENST00000454350 PCDHA12Q9UN75 941 aa20.68■□□□□ 0.9
UBE2D4-208ENST00000454350 ARIH1Q9Y4X5 557 aaPredicted RBP20.68■□□□□ 0.9
UBE2D4-208ENST00000454350 BAG4O95429 457 aaKnown RBP20.67■□□□□ 0.9
UBE2D4-208ENST00000454350 SRGAP2CP0DJJ0 459 aa20.67■□□□□ 0.9
UBE2D4-208ENST00000454350 FOSBP53539 338 aa20.67■□□□□ 0.9
UBE2D4-208ENST00000454350 KRT17Q04695 432 aa20.67■□□□□ 0.9
UBE2D4-208ENST00000454350 CBX2Q14781 532 aaPredicted RBP20.67■□□□□ 0.9
UBE2D4-208ENST00000454350 XKR9Q5GH70 373 aa20.67■□□□□ 0.9
UBE2D4-208ENST00000454350 HERC4Q5GLZ8 1057 aaPredicted RBP20.67■□□□□ 0.9
UBE2D4-208ENST00000454350 OTUD6AQ7L8S5 288 aa20.67■□□□□ 0.9
UBE2D4-208ENST00000454350 MRPL10Q7Z7H8 261 aaKnown RBP20.67■□□□□ 0.9
UBE2D4-208ENST00000454350 TPH2Q8IWU9 490 aa20.67■□□□□ 0.9
UBE2D4-208ENST00000454350 MRPL43Q8N983 215 aaKnown RBP20.67■□□□□ 0.9
UBE2D4-208ENST00000454350 BCL7CQ8WUZ0 217 aaPredicted RBP20.67■□□□□ 0.9
UBE2D4-208ENST00000454350 RSPH1Q8WYR4 309 aa20.67■□□□□ 0.9
UBE2D4-208ENST00000454350 BRMS1Q9HCU9 246 aa20.67■□□□□ 0.9
UBE2D4-208ENST00000454350 ENTPD7Q9NQZ7 604 aa20.67■□□□□ 0.9
UBE2D4-208ENST00000454350 MUTYHQ9UIF7 546 aa20.67■□□□□ 0.9
UBE2D4-208ENST00000454350 PCDHB2Q9Y5E7 798 aa20.67■□□□□ 0.9
UBE2D4-208ENST00000454350 FSD2A1L4K1 749 aa20.66■□□□□ 0.9
UBE2D4-208ENST00000454350 C2orf71A6NGG8 1288 aa20.66■□□□□ 0.9
UBE2D4-208ENST00000454350 GAS2O43903 313 aaKnown RBP20.66■□□□□ 0.9
UBE2D4-208ENST00000454350 MARCH6O60337 910 aa20.66■□□□□ 0.9
UBE2D4-208ENST00000454350 SKIP12755 728 aa20.66■□□□□ 0.9
UBE2D4-208ENST00000454350 PLA2G5P39877 138 aa20.66■□□□□ 0.9
UBE2D4-208ENST00000454350 RAB27AP51159 221 aa20.66■□□□□ 0.9
UBE2D4-208ENST00000454350 AFF1P51825 1210 aaKnown RBP20.66■□□□□ 0.9
UBE2D4-208ENST00000454350 CALCRLQ16602 461 aa20.66■□□□□ 0.9
UBE2D4-208ENST00000454350 NOMO2Q5JPE7 1267 aa20.66■□□□□ 0.9
UBE2D4-208ENST00000454350 ANKRD54Q6NXT1 300 aa20.66■□□□□ 0.9
UBE2D4-208ENST00000454350 TCP11Q8WWU5 503 aa20.66■□□□□ 0.9
UBE2D4-208ENST00000454350 TMEM60Q9H2L4 133 aa20.66■□□□□ 0.9
UBE2D4-208ENST00000454350 TTC12Q9H892 705 aaPredicted RBP20.66■□□□□ 0.9
UBE2D4-208ENST00000454350 ASAP2O43150 1006 aa20.65■□□□□ 0.9
UBE2D4-208ENST00000454350 NEMFO60524 1076 aa20.65■□□□□ 0.9
UBE2D4-208ENST00000454350 GALTP07902 379 aa20.65■□□□□ 0.9
UBE2D4-208ENST00000454350 ALDH7A1P49419 539 aaKnown RBP20.65■□□□□ 0.9
UBE2D4-208ENST00000454350 GLB1LQ6UWU2 654 aa20.65■□□□□ 0.9
UBE2D4-208ENST00000454350 TMC7Q7Z402 723 aa20.65■□□□□ 0.9
UBE2D4-208ENST00000454350 RNF149Q8NC42 400 aa20.65■□□□□ 0.9
UBE2D4-208ENST00000454350 KIF2CQ99661 725 aa20.65■□□□□ 0.9
UBE2D4-208ENST00000454350 MTRQ99707 1265 aa20.65■□□□□ 0.9
UBE2D4-208ENST00000454350 VN1R3Q9BXE9 311 aa20.65■□□□□ 0.9
UBE2D4-208ENST00000454350 DNAJB4Q9UDY4 337 aa20.65■□□□□ 0.9
UBE2D4-208ENST00000454350 WDFY4Q6ZS81 3184 aa20.65■□□□□ 0.9
UBE2D4-208ENST00000454350 ZC3H11AO75152 810 aaKnown RBP eCLIP20.64■□□□□ 0.89
UBE2D4-208ENST00000454350 TXKP42681 527 aa20.64■□□□□ 0.89
UBE2D4-208ENST00000454350 PTENP60484 403 aa20.64■□□□□ 0.89
UBE2D4-208ENST00000454350 ZNF280BQ86YH2 543 aa20.64■□□□□ 0.89
UBE2D4-208ENST00000454350 IFNLR1Q8IU57 520 aaPredicted RBP20.64■□□□□ 0.89
UBE2D4-208ENST00000454350 ASAP3Q8TDY4 903 aa20.64■□□□□ 0.89
UBE2D4-208ENST00000454350 IGSF21Q96ID5 467 aa20.64■□□□□ 0.89
UBE2D4-208ENST00000454350 PHF7Q9BWX1 381 aaPredicted RBP20.64■□□□□ 0.89
UBE2D4-208ENST00000454350 ZBP1Q9H171 429 aa20.64■□□□□ 0.89
UBE2D4-208ENST00000454350 ANKEF1Q9NU02 776 aa20.64■□□□□ 0.89
UBE2D4-208ENST00000454350 DENND4AQ7Z401 1863 aa20.64■□□□□ 0.89
UBE2D4-208ENST00000454350 C2orf16Q68DN1 1984 aa20.63■□□□□ 0.89
UBE2D4-208ENST00000454350 A0A087WWV3 80 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms