RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 GLT1D1Q96MS3 346 aa21.19■□□□□ 0.98
RPS28-202ENST00000449223 ACCSQ96QU6 501 aa21.19■□□□□ 0.98
RPS28-202ENST00000449223 MAP7D2Q96T17 732 aa21.19■□□□□ 0.98
RPS28-202ENST00000449223 KIFC3Q9BVG8 833 aa21.19■□□□□ 0.98
RPS28-202ENST00000449223 SEZ6LQ9BYH1 1024 aa21.19■□□□□ 0.98
RPS28-202ENST00000449223 CRISPLD2Q9H0B8 497 aa21.19■□□□□ 0.98
RPS28-202ENST00000449223 RNF208Q9H0X6 261 aa21.19■□□□□ 0.98
RPS28-202ENST00000449223 CGNQ9P2M7 1197 aaKnown RBP21.19■□□□□ 0.98
RPS28-202ENST00000449223 TBX20Q9UMR3 447 aa21.19■□□□□ 0.98
RPS28-202ENST00000449223 RPLP2P05387 115 aaKnown RBP21.19■□□□□ 0.98
RPS28-202ENST00000449223 TPM4P67936 248 aa21.19■□□□□ 0.98
RPS28-202ENST00000449223 TAS1R3Q7RTX0 852 aa21.19■□□□□ 0.98
RPS28-202ENST00000449223 RHPN2Q8IUC4 686 aa21.19■□□□□ 0.98
RPS28-202ENST00000449223 DEPTORQ8TB45 409 aa21.19■□□□□ 0.98
RPS28-202ENST00000449223 GOLGA5Q8TBA6 731 aa21.19■□□□□ 0.98
RPS28-202ENST00000449223 NOC3LQ8WTT2 800 aaKnown RBP21.19■□□□□ 0.98
RPS28-202ENST00000449223 TSG101Q99816 390 aa21.19■□□□□ 0.98
RPS28-202ENST00000449223 GBP3Q9H0R5 595 aa21.19■□□□□ 0.98
RPS28-202ENST00000449223 C2orf40Q9H1Z8 148 aa21.19■□□□□ 0.98
RPS28-202ENST00000449223 FANCLQ9NW38 375 aa21.19■□□□□ 0.98
RPS28-202ENST00000449223 LRRIQ4A6NIV6 560 aa21.18■□□□□ 0.98
RPS28-202ENST00000449223 KBTBD13C9JR72 458 aa21.18■□□□□ 0.98
RPS28-202ENST00000449223 TREHO43280 583 aa21.18■□□□□ 0.98
RPS28-202ENST00000449223 CYP2C9P11712 490 aa21.18■□□□□ 0.98
RPS28-202ENST00000449223 PTENP60484 403 aa21.18■□□□□ 0.98
RPS28-202ENST00000449223 ZNF410Q86VK4 478 aa21.18■□□□□ 0.98
RPS28-202ENST00000449223 RNF149Q8NC42 400 aa21.18■□□□□ 0.98
RPS28-202ENST00000449223 DEFB118Q96PH6 123 aa21.18■□□□□ 0.98
RPS28-202ENST00000449223 CCDC113Q9H0I3 377 aa21.18■□□□□ 0.98
RPS28-202ENST00000449223 THAP9Q9H5L6 903 aa21.18■□□□□ 0.98
RPS28-202ENST00000449223 PRDM10Q9NQV6 1147 aa21.18■□□□□ 0.98
RPS28-202ENST00000449223 EXOC7Q9UPT5 735 aa21.18■□□□□ 0.98
RPS28-202ENST00000449223 DNAH12Q6ZR08 3092 aa21.17■□□□□ 0.98
RPS28-202ENST00000449223 A0A1W2PQ45 241 aaPredicted RBP21.17■□□□□ 0.98
RPS28-202ENST00000449223 A0A1W2PQY0 241 aa21.17■□□□□ 0.98
RPS28-202ENST00000449223 CALUO43852 315 aaPredicted RBP21.17■□□□□ 0.98
RPS28-202ENST00000449223 PIGRP01833 764 aa21.17■□□□□ 0.98
RPS28-202ENST00000449223 FKBP3Q00688 224 aaKnown RBP21.17■□□□□ 0.98
RPS28-202ENST00000449223 ITGA7Q13683 1181 aa21.17■□□□□ 0.98
RPS28-202ENST00000449223 MYBPC2Q14324 1141 aa21.17■□□□□ 0.98
RPS28-202ENST00000449223 SARM1Q6SZW1 724 aa21.17■□□□□ 0.98
RPS28-202ENST00000449223 LRRC55Q6ZSA7 311 aa21.17■□□□□ 0.98
RPS28-202ENST00000449223 RPAINQ86UA6 219 aa21.17■□□□□ 0.98
RPS28-202ENST00000449223 SLC9A9Q8IVB4 645 aa21.17■□□□□ 0.98
RPS28-202ENST00000449223 KSR1Q8IVT5 923 aa21.17■□□□□ 0.98
RPS28-202ENST00000449223 C12orf56Q8IXR9 622 aa21.17■□□□□ 0.98
RPS28-202ENST00000449223 NME8Q8N427 588 aa21.17■□□□□ 0.98
RPS28-202ENST00000449223 CSGALNACT2Q8N6G5 542 aa21.17■□□□□ 0.98
RPS28-202ENST00000449223 IFT122Q9HBG6 1241 aa21.17■□□□□ 0.98
RPS28-202ENST00000449223 AKT3Q9Y243 479 aa21.17■□□□□ 0.98
RPS28-202ENST00000449223 GJB1P08034 283 aa21.16■□□□□ 0.98
RPS28-202ENST00000449223 GPC3P51654 580 aa21.16■□□□□ 0.98
RPS28-202ENST00000449223 CHMP4BP1P59074 171 aa21.16■□□□□ 0.98
RPS28-202ENST00000449223 GDF6Q6KF10 455 aaPredicted RBP21.16■□□□□ 0.98
RPS28-202ENST00000449223 RUFY4Q6ZNE9 571 aa21.16■□□□□ 0.98
RPS28-202ENST00000449223 HS2ST1Q7LGA3 356 aa21.16■□□□□ 0.98
RPS28-202ENST00000449223 SERINC5Q86VE9 423 aa21.16■□□□□ 0.98
RPS28-202ENST00000449223 ZBTB8OSQ8IWT0 167 aa21.16■□□□□ 0.98
RPS28-202ENST00000449223 CEP63Q96MT8 703 aa21.16■□□□□ 0.98
RPS28-202ENST00000449223 CTAGE1Q96RT6 745 aa21.16■□□□□ 0.98
RPS28-202ENST00000449223 SAMSN1Q9NSI8 373 aaKnown RBP21.16■□□□□ 0.98
RPS28-202ENST00000449223 K7ERI5 159 aa21.15■□□□□ 0.98
RPS28-202ENST00000449223 FGFR1OPO95684 399 aaKnown RBP21.15■□□□□ 0.98
RPS28-202ENST00000449223 MYCNP04198 464 aaPredicted RBP21.15■□□□□ 0.98
RPS28-202ENST00000449223 CAPN2P17655 700 aa21.15■□□□□ 0.98
RPS28-202ENST00000449223 PHKA2P46019 1235 aa21.15■□□□□ 0.98
RPS28-202ENST00000449223 ZNF200P98182 395 aaPredicted RBP21.15■□□□□ 0.98
RPS28-202ENST00000449223 TPD52L1Q16890 204 aaPredicted RBP21.15■□□□□ 0.98
RPS28-202ENST00000449223 IRF2BP1Q8IU81 584 aa21.15■□□□□ 0.98
RPS28-202ENST00000449223 FZD8Q9H461 694 aa21.15■□□□□ 0.98
RPS28-202ENST00000449223 AGPAT3Q9NRZ7 376 aa21.15■□□□□ 0.98
RPS28-202ENST00000449223 A0A0U1RQG5 324 aaPredicted RBP21.14■□□□□ 0.98
RPS28-202ENST00000449223 GPR32O75388 356 aa21.14■□□□□ 0.98
RPS28-202ENST00000449223 SGPL1O95470 568 aa21.14■□□□□ 0.98
RPS28-202ENST00000449223 VTNP04004 478 aa21.14■□□□□ 0.98
RPS28-202ENST00000449223 SRGAP2CP0DJJ0 459 aa21.14■□□□□ 0.98
RPS28-202ENST00000449223 SPAG1Q07617 926 aa21.14■□□□□ 0.98
RPS28-202ENST00000449223 FAM187BQ17R55 369 aa21.14■□□□□ 0.98
RPS28-202ENST00000449223 PPP1R13LQ8WUF5 828 aa21.14■□□□□ 0.98
RPS28-202ENST00000449223 NLRP4Q96MN2 994 aa21.14■□□□□ 0.98
RPS28-202ENST00000449223 SRRTQ9BXP5 876 aaKnown RBP21.14■□□□□ 0.98
RPS28-202ENST00000449223 ADAMTS10Q9H324 1103 aa21.14■□□□□ 0.98
RPS28-202ENST00000449223 STARD7Q9NQZ5 370 aa21.14■□□□□ 0.98
RPS28-202ENST00000449223 DMAC2Q9NW81 257 aa21.14■□□□□ 0.98
RPS28-202ENST00000449223 LRRC10BA6NIK2 292 aa21.14■□□□□ 0.97
RPS28-202ENST00000449223 MBTD1Q05BQ5 628 aa21.14■□□□□ 0.97
RPS28-202ENST00000449223 STRN3Q13033 797 aa21.14■□□□□ 0.97
RPS28-202ENST00000449223 PCBP1Q15365 356 aaKnown RBP eCLIP21.14■□□□□ 0.97
RPS28-202ENST00000449223 ZPBP2Q6X784 338 aa21.14■□□□□ 0.97
RPS28-202ENST00000449223 SYCP3Q8IZU3 236 aa21.14■□□□□ 0.97
RPS28-202ENST00000449223 U2AF1L4Q8WU68 220 aaKnown RBP21.14■□□□□ 0.97
RPS28-202ENST00000449223 STYXL1Q9Y6J8 313 aa21.14■□□□□ 0.97
RPS28-202ENST00000449223 NR3C1P04150 777 aa21.13■□□□□ 0.97
RPS28-202ENST00000449223 ATP1A3P13637 1013 aa21.13■□□□□ 0.97
RPS28-202ENST00000449223 NR2F2P24468 414 aa21.13■□□□□ 0.97
RPS28-202ENST00000449223 RPL13P26373 211 aaKnown RBP21.13■□□□□ 0.97
RPS28-202ENST00000449223 EEF1GP26641 437 aaKnown RBP21.13■□□□□ 0.97
RPS28-202ENST00000449223 MARSP56192 900 aaKnown RBP21.13■□□□□ 0.97
RPS28-202ENST00000449223 NLRP11P59045 1033 aaKnown RBP21.13■□□□□ 0.97
RPS28-202ENST00000449223 MAPK6Q16659 721 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms