RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 DDX19AQ9NUU7 478 aaKnown RBP14.15□□□□□ -0.14
PRPF40A-203ENST00000448428 THEGQ9P2T0 379 aa14.15□□□□□ -0.14
PRPF40A-203ENST00000448428 REV3LO60673 3130 aa14.15□□□□□ -0.14
PRPF40A-203ENST00000448428 ZNF623O75123 536 aa14.14□□□□□ -0.15
PRPF40A-203ENST00000448428 ITGB1P05556 798 aa14.14□□□□□ -0.15
PRPF40A-203ENST00000448428 SKIP12755 728 aa14.14□□□□□ -0.15
PRPF40A-203ENST00000448428 CYP11B2P19099 503 aa14.14□□□□□ -0.15
PRPF40A-203ENST00000448428 SYT1P21579 422 aa14.14□□□□□ -0.15
PRPF40A-203ENST00000448428 CAMK1Q14012 370 aa14.14□□□□□ -0.15
PRPF40A-203ENST00000448428 LONRF3Q496Y0 759 aa14.14□□□□□ -0.15
PRPF40A-203ENST00000448428 SPOUT1Q5T280 376 aaKnown RBP14.14□□□□□ -0.15
PRPF40A-203ENST00000448428 KRT79Q5XKE5 535 aa14.14□□□□□ -0.15
PRPF40A-203ENST00000448428 ARL6IP4Q66PJ3 421 aaKnown RBP14.14□□□□□ -0.15
PRPF40A-203ENST00000448428 ABI1Q8IZP0 508 aa14.14□□□□□ -0.15
PRPF40A-203ENST00000448428 SPPL3Q8TCT6 385 aa14.14□□□□□ -0.15
PRPF40A-203ENST00000448428 HELQQ8TDG4 1101 aa14.14□□□□□ -0.15
PRPF40A-203ENST00000448428 LPPQ93052 612 aa14.14□□□□□ -0.15
PRPF40A-203ENST00000448428 SNX21Q969T3 373 aa14.14□□□□□ -0.15
PRPF40A-203ENST00000448428 LMAN2LQ9H0V9 348 aa14.14□□□□□ -0.15
PRPF40A-203ENST00000448428 BHMT2Q9H2M3 363 aa14.14□□□□□ -0.15
PRPF40A-203ENST00000448428 POLD4Q9HCU8 107 aa14.14□□□□□ -0.15
PRPF40A-203ENST00000448428 PCDHB2Q9Y5E7 798 aa14.14□□□□□ -0.15
PRPF40A-203ENST00000448428 PCDHB12Q9Y5F1 795 aa14.14□□□□□ -0.15
PRPF40A-203ENST00000448428 MYO7AQ13402 2215 aa14.13□□□□□ -0.15
PRPF40A-203ENST00000448428 VWA3AA6NCI4 1184 aa14.13□□□□□ -0.15
PRPF40A-203ENST00000448428 MEIS3P2A8K0S8 358 aa14.13□□□□□ -0.15
PRPF40A-203ENST00000448428 E9PMD0 336 aa14.13□□□□□ -0.15
PRPF40A-203ENST00000448428 INO80B-WBP1J3KQ70 363 aa14.13□□□□□ -0.15
PRPF40A-203ENST00000448428 DLL1O00548 723 aa14.13□□□□□ -0.15
PRPF40A-203ENST00000448428 TSPAN1O60635 241 aa14.13□□□□□ -0.15
PRPF40A-203ENST00000448428 ERLIN2O94905 339 aa14.13□□□□□ -0.15
PRPF40A-203ENST00000448428 DNAJB1P25685 340 aa14.13□□□□□ -0.15
PRPF40A-203ENST00000448428 RAB27AP51159 221 aa14.13□□□□□ -0.15
PRPF40A-203ENST00000448428 MRPS5P82675 430 aaKnown RBP14.13□□□□□ -0.15
PRPF40A-203ENST00000448428 TFF2Q03403 129 aa14.13□□□□□ -0.15
PRPF40A-203ENST00000448428 MBTD1Q05BQ5 628 aa14.13□□□□□ -0.15
PRPF40A-203ENST00000448428 PCBP1Q15365 356 aaKnown RBP eCLIP14.13□□□□□ -0.15
PRPF40A-203ENST00000448428 UBXN11Q5T124 520 aa14.13□□□□□ -0.15
PRPF40A-203ENST00000448428 COLGALT1Q8NBJ5 622 aa14.13□□□□□ -0.15
PRPF40A-203ENST00000448428 BSNDQ8WZ55 320 aa14.13□□□□□ -0.15
PRPF40A-203ENST00000448428 HLA-CQ95604 372 aa14.13□□□□□ -0.15
PRPF40A-203ENST00000448428 ASB2Q96Q27 587 aa14.13□□□□□ -0.15
PRPF40A-203ENST00000448428 NFKBIZQ9BYH8 718 aa14.13□□□□□ -0.15
PRPF40A-203ENST00000448428 AAASQ9NRG9 546 aa14.13□□□□□ -0.15
PRPF40A-203ENST00000448428 DNM3Q9UQ16 869 aa14.13□□□□□ -0.15
PRPF40A-203ENST00000448428 TCF20Q9UGU0 1960 aaKnown RBP14.13□□□□□ -0.15
PRPF40A-203ENST00000448428 LRRIQ4A6NIV6 560 aa14.12□□□□□ -0.15
PRPF40A-203ENST00000448428 EYA4O95677 639 aa14.12□□□□□ -0.15
PRPF40A-203ENST00000448428 SF3A1Q15459 793 aaKnown RBP14.12□□□□□ -0.15
PRPF40A-203ENST00000448428 AMHR2Q16671 573 aa14.12□□□□□ -0.15
PRPF40A-203ENST00000448428 TIGD5Q53EQ6 642 aa14.12□□□□□ -0.15
PRPF40A-203ENST00000448428 TCEAL5Q5H9L2 206 aa14.12□□□□□ -0.15
PRPF40A-203ENST00000448428 KCNK18Q7Z418 384 aa14.12□□□□□ -0.15
PRPF40A-203ENST00000448428 MRPL10Q7Z7H8 261 aaKnown RBP14.12□□□□□ -0.15
PRPF40A-203ENST00000448428 CPB2Q96IY4 423 aa14.12□□□□□ -0.15
PRPF40A-203ENST00000448428 COL25A1Q9BXS0 654 aaPredicted RBP14.12□□□□□ -0.15
PRPF40A-203ENST00000448428 NSUN3Q9H649 340 aaKnown RBP14.12□□□□□ -0.15
PRPF40A-203ENST00000448428 COG5Q9UP83 839 aa14.12□□□□□ -0.15
PRPF40A-203ENST00000448428 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.11□□□□□ -0.15
PRPF40A-203ENST00000448428 B4GALT5O43286 388 aa14.11□□□□□ -0.15
PRPF40A-203ENST00000448428 OFD1O75665 1012 aa14.11□□□□□ -0.15
PRPF40A-203ENST00000448428 FGF18O76093 207 aa14.11□□□□□ -0.15
PRPF40A-203ENST00000448428 CSPG5O95196 566 aa14.11□□□□□ -0.15
PRPF40A-203ENST00000448428 ARF4P18085 180 aaPredicted RBP14.11□□□□□ -0.15
PRPF40A-203ENST00000448428 LAG3P18627 525 aa14.11□□□□□ -0.15
PRPF40A-203ENST00000448428 AXLP30530 894 aa14.11□□□□□ -0.15
PRPF40A-203ENST00000448428 NCBP1Q09161 790 aaKnown RBP14.11□□□□□ -0.15
PRPF40A-203ENST00000448428 RESTQ13127 1097 aa14.11□□□□□ -0.15
PRPF40A-203ENST00000448428 ZRSR1Q15695 479 aaKnown RBP14.11□□□□□ -0.15
PRPF40A-203ENST00000448428 TJAP1Q5JTD0 557 aa14.11□□□□□ -0.15
PRPF40A-203ENST00000448428 HYIQ5T013 277 aa14.11□□□□□ -0.15
PRPF40A-203ENST00000448428 FAM173BQ6P4H8 233 aa14.11□□□□□ -0.15
PRPF40A-203ENST00000448428 KCNT2Q6UVM3 1135 aa14.11□□□□□ -0.15
PRPF40A-203ENST00000448428 AGMOQ6ZNB7 445 aa14.11□□□□□ -0.15
PRPF40A-203ENST00000448428 LRRC43Q8N309 656 aa14.11□□□□□ -0.15
PRPF40A-203ENST00000448428 SMG8Q8ND04 991 aaKnown RBP14.11□□□□□ -0.15
PRPF40A-203ENST00000448428 POF1BQ8WVV4 589 aa14.11□□□□□ -0.15
PRPF40A-203ENST00000448428 PGBD4Q96DM1 585 aa14.11□□□□□ -0.15
PRPF40A-203ENST00000448428 PNMA5Q96PV4 448 aa14.11□□□□□ -0.15
PRPF40A-203ENST00000448428 PLIN2Q99541 437 aa14.11□□□□□ -0.15
PRPF40A-203ENST00000448428 EIF2AQ9BY44 585 aaKnown RBP14.11□□□□□ -0.15
PRPF40A-203ENST00000448428 MTMR6Q9Y217 621 aa14.11□□□□□ -0.15
PRPF40A-203ENST00000448428 CLIC4Q9Y696 253 aa14.11□□□□□ -0.15
PRPF40A-203ENST00000448428 UNC80Q8N2C7 3258 aa14.11□□□□□ -0.15
PRPF40A-203ENST00000448428 BMP15O95972 392 aa14.1□□□□□ -0.15
PRPF40A-203ENST00000448428 IRS1P35568 1242 aa14.1□□□□□ -0.15
PRPF40A-203ENST00000448428 PBX3P40426 434 aa14.1□□□□□ -0.15
PRPF40A-203ENST00000448428 GRIN1Q05586 938 aa14.1□□□□□ -0.15
PRPF40A-203ENST00000448428 CSPP1Q1MSJ5 1256 aa14.1□□□□□ -0.15
PRPF40A-203ENST00000448428 NOMO2Q5JPE7 1267 aa14.1□□□□□ -0.15
PRPF40A-203ENST00000448428 CDCA2Q69YH5 1023 aaPredicted RBP14.1□□□□□ -0.15
PRPF40A-203ENST00000448428 RINT1Q6NUQ1 792 aa14.1□□□□□ -0.15
PRPF40A-203ENST00000448428 NOTUMQ6P988 496 aa14.1□□□□□ -0.15
PRPF40A-203ENST00000448428 GLB1LQ6UWU2 654 aa14.1□□□□□ -0.15
PRPF40A-203ENST00000448428 THNSL1Q8IYQ7 743 aa14.1□□□□□ -0.15
PRPF40A-203ENST00000448428 ZNF558Q96NG5 402 aa14.1□□□□□ -0.15
PRPF40A-203ENST00000448428 RUSC1Q9BVN2 902 aa14.1□□□□□ -0.15
PRPF40A-203ENST00000448428 CSRNP2Q9H175 543 aa14.1□□□□□ -0.15
PRPF40A-203ENST00000448428 RNF39Q9H2S5 420 aa14.1□□□□□ -0.15
PRPF40A-203ENST00000448428 FZD8Q9H461 694 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms