RNA–Protein interactions for RNA: ENST00000445220.5

SHANK3-203, Transcript of SH3 and multiple ankyrin repeat domains 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK3, Length 5,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK3-203ENST00000445220 SUSD4Q5VX71 490 aa19.83■□□□□ 0.76
SHANK3-203ENST00000445220 TRIM59Q8IWR1 403 aa19.83■□□□□ 0.76
SHANK3-203ENST00000445220 TEKT4Q8WW24 435 aa19.83■□□□□ 0.76
SHANK3-203ENST00000445220 ADA2Q9NZK5 511 aa19.83■□□□□ 0.76
SHANK3-203ENST00000445220 PITPNM2Q9BZ72 1349 aa19.82■□□□□ 0.76
SHANK3-203ENST00000445220 OATP04181 439 aa19.82■□□□□ 0.76
SHANK3-203ENST00000445220 METTL13Q8N6R0 699 aa19.82■□□□□ 0.76
SHANK3-203ENST00000445220 PSPC1Q8WXF1 523 aaKnown RBP19.82■□□□□ 0.76
SHANK3-203ENST00000445220 PDP2Q9P2J9 529 aa19.82■□□□□ 0.76
SHANK3-203ENST00000445220 PALLDQ8WX93 1383 aa19.82■□□□□ 0.76
SHANK3-203ENST00000445220 ESRRBO95718 433 aa19.82■□□□□ 0.76
SHANK3-203ENST00000445220 KIF2CQ99661 725 aa19.82■□□□□ 0.76
SHANK3-203ENST00000445220 ZNF577Q9BSK1 485 aa19.82■□□□□ 0.76
SHANK3-203ENST00000445220 PI4KBQ9UBF8 816 aa19.82■□□□□ 0.76
SHANK3-203ENST00000445220 LAMC1P11047 1609 aa19.82■□□□□ 0.76
SHANK3-203ENST00000445220 PVALEFA0A1B0GWK0 134 aa19.82■□□□□ 0.76
SHANK3-203ENST00000445220 LRRC31Q6UY01 552 aa19.82■□□□□ 0.76
SHANK3-203ENST00000445220 CDHR1Q96JP9 859 aa19.82■□□□□ 0.76
SHANK3-203ENST00000445220 HEMGNQ9BXL5 484 aa19.82■□□□□ 0.76
SHANK3-203ENST00000445220 L2HGDHQ9H9P8 463 aa19.82■□□□□ 0.76
SHANK3-203ENST00000445220 A0A1B0GTH6 734 aa19.82■□□□□ 0.76
SHANK3-203ENST00000445220 E9PMD0 336 aa19.82■□□□□ 0.76
SHANK3-203ENST00000445220 KRT8P05787 483 aa19.82■□□□□ 0.76
SHANK3-203ENST00000445220 DAB2P98082 770 aa19.82■□□□□ 0.76
SHANK3-203ENST00000445220 MECOMQ03112 1051 aa19.82■□□□□ 0.76
SHANK3-203ENST00000445220 SMG5Q9UPR3 1016 aaKnown RBP19.82■□□□□ 0.76
SHANK3-203ENST00000445220 COPS2P61201 443 aa19.81■□□□□ 0.76
SHANK3-203ENST00000445220 ALCAMQ13740 583 aa19.81■□□□□ 0.76
SHANK3-203ENST00000445220 ATP11CQ8NB49 1132 aa19.81■□□□□ 0.76
SHANK3-203ENST00000445220 MOV10L1Q9BXT6 1211 aaKnown RBP19.81■□□□□ 0.76
SHANK3-203ENST00000445220 ASCC2Q9H1I8 757 aaPredicted RBP19.81■□□□□ 0.76
SHANK3-203ENST00000445220 ALDH8A1Q9H2A2 487 aaPredicted RBP19.81■□□□□ 0.76
SHANK3-203ENST00000445220 DONSONQ9NYP3 566 aa19.81■□□□□ 0.76
SHANK3-203ENST00000445220 PNPLA6Q8IY17 1366 aa19.81■□□□□ 0.76
SHANK3-203ENST00000445220 ZNF185O15231 689 aa19.81■□□□□ 0.76
SHANK3-203ENST00000445220 MCAMP43121 646 aa19.81■□□□□ 0.76
SHANK3-203ENST00000445220 CTCFP49711 727 aaPredicted RBP19.81■□□□□ 0.76
SHANK3-203ENST00000445220 SEC24CP53992 1094 aa19.81■□□□□ 0.76
SHANK3-203ENST00000445220 TFDP1Q14186 410 aa19.81■□□□□ 0.76
SHANK3-203ENST00000445220 SEPT8Q92599 483 aa19.81■□□□□ 0.76
SHANK3-203ENST00000445220 MARK3P27448 753 aa19.81■□□□□ 0.76
SHANK3-203ENST00000445220 COA1Q9GZY4 146 aa19.81■□□□□ 0.76
SHANK3-203ENST00000445220 SLC38A10Q9HBR0 1119 aa19.81■□□□□ 0.76
SHANK3-203ENST00000445220 KMT5AQ9NQR1 393 aa19.81■□□□□ 0.76
SHANK3-203ENST00000445220 MEIS1O00470 390 aa19.81■□□□□ 0.76
SHANK3-203ENST00000445220 ZBTB41Q5SVQ8 909 aa19.81■□□□□ 0.76
SHANK3-203ENST00000445220 C3orf20Q8ND61 904 aa19.81■□□□□ 0.76
SHANK3-203ENST00000445220 RAPGEF5Q92565 580 aa19.81■□□□□ 0.76
SHANK3-203ENST00000445220 ZBTB10Q96DT7 871 aa19.81■□□□□ 0.76
SHANK3-203ENST00000445220 VPS39Q96JC1 886 aa19.81■□□□□ 0.76
SHANK3-203ENST00000445220 LCMT1Q9UIC8 334 aa19.81■□□□□ 0.76
SHANK3-203ENST00000445220 USP31Q70CQ4 1352 aa19.81■□□□□ 0.76
SHANK3-203ENST00000445220 SPHKAPQ2M3C7 1700 aa19.8■□□□□ 0.76
SHANK3-203ENST00000445220 H2AFXP16104 143 aaPredicted RBP19.8■□□□□ 0.76
SHANK3-203ENST00000445220 NCAPHQ15003 741 aa19.8■□□□□ 0.76
SHANK3-203ENST00000445220 DACH2Q96NX9 599 aa19.8■□□□□ 0.76
SHANK3-203ENST00000445220 ALKQ9UM73 1620 aa19.8■□□□□ 0.76
SHANK3-203ENST00000445220 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.8■□□□□ 0.76
SHANK3-203ENST00000445220 ANKRD36BP1Q96IX9 119 aa19.8■□□□□ 0.76
SHANK3-203ENST00000445220 FHOD1Q9Y613 1164 aa19.8■□□□□ 0.76
SHANK3-203ENST00000445220 CCDC195A0A1B0GUA6 201 aa19.8■□□□□ 0.76
SHANK3-203ENST00000445220 FOXP2O15409 715 aa19.8■□□□□ 0.76
SHANK3-203ENST00000445220 KRT75O95678 551 aa19.8■□□□□ 0.76
SHANK3-203ENST00000445220 ACADSP16219 412 aa19.8■□□□□ 0.76
SHANK3-203ENST00000445220 MAP4P27816 1152 aaKnown RBP19.8■□□□□ 0.76
SHANK3-203ENST00000445220 FOXP4Q8IVH2 680 aaPredicted RBP19.8■□□□□ 0.76
SHANK3-203ENST00000445220 SULF1Q8IWU6 871 aa19.8■□□□□ 0.76
SHANK3-203ENST00000445220 WNT8AQ9H1J5 351 aa19.8■□□□□ 0.76
SHANK3-203ENST00000445220 LIMA1Q9UHB6 759 aaKnown RBP19.8■□□□□ 0.76
SHANK3-203ENST00000445220 USP17L8P0C7I0 530 aa19.8■□□□□ 0.76
SHANK3-203ENST00000445220 KCNH2Q12809 1159 aa19.8■□□□□ 0.76
SHANK3-203ENST00000445220 DHX38Q92620 1227 aaKnown RBP19.8■□□□□ 0.76
SHANK3-203ENST00000445220 FAM149B1Q96BN6 582 aa19.8■□□□□ 0.76
SHANK3-203ENST00000445220 ERP27Q96DN0 273 aa19.8■□□□□ 0.76
SHANK3-203ENST00000445220 ZIM3Q96PE6 472 aa19.8■□□□□ 0.76
SHANK3-203ENST00000445220 SUCLA2Q9P2R7 463 aaPredicted RBP19.8■□□□□ 0.76
SHANK3-203ENST00000445220 KRT14P02533 472 aa19.79■□□□□ 0.76
SHANK3-203ENST00000445220 EFTUD2Q15029 972 aaKnown RBP eCLIP19.79■□□□□ 0.762e-6■■■■□ 24.3
SHANK3-203ENST00000445220 KCTD1Q719H9 257 aa19.79■□□□□ 0.76
SHANK3-203ENST00000445220 EXOC8Q8IYI6 725 aa19.79■□□□□ 0.76
SHANK3-203ENST00000445220 PPM1NQ8N819 430 aa19.79■□□□□ 0.76
SHANK3-203ENST00000445220 FUT8Q9BYC5 575 aa19.79■□□□□ 0.76
SHANK3-203ENST00000445220 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.79■□□□□ 0.76
SHANK3-203ENST00000445220 FGFR4P22455 802 aa19.79■□□□□ 0.76
SHANK3-203ENST00000445220 SYDE2Q5VT97 1194 aa19.79■□□□□ 0.76
SHANK3-203ENST00000445220 ZBTB18Q99592 522 aa19.79■□□□□ 0.76
SHANK3-203ENST00000445220 KIF9Q9HAQ2 790 aa19.79■□□□□ 0.76
SHANK3-203ENST00000445220 ITIH6Q6UXX5 1313 aa19.79■□□□□ 0.76
SHANK3-203ENST00000445220 IGF2BP3O00425 579 aaKnown RBP eCLIP19.79■□□□□ 0.76
SHANK3-203ENST00000445220 RPS6KA4O75676 772 aa19.79■□□□□ 0.76
SHANK3-203ENST00000445220 DDIT3P35638 169 aa19.79■□□□□ 0.76
SHANK3-203ENST00000445220 PDXDC1Q6P996 788 aa19.79■□□□□ 0.76
SHANK3-203ENST00000445220 FAM160B2Q86V87 743 aa19.79■□□□□ 0.76
SHANK3-203ENST00000445220 DCPSQ96C86 337 aaKnown RBP19.79■□□□□ 0.76
SHANK3-203ENST00000445220 TRABDQ9H4I3 376 aa19.79■□□□□ 0.76
SHANK3-203ENST00000445220 PMS1P54277 932 aaKnown RBP19.79■□□□□ 0.76
SHANK3-203ENST00000445220 PDIA2Q13087 525 aaKnown RBP19.79■□□□□ 0.76
SHANK3-203ENST00000445220 SHC4Q6S5L8 630 aa19.79■□□□□ 0.76
SHANK3-203ENST00000445220 RFFLQ8WZ73 363 aa19.79■□□□□ 0.76
SHANK3-203ENST00000445220 RANBP17Q9H2T7 1088 aaKnown RBP19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms