RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 LRCH3Q96II8 777 aa13.63□□□□□ -0.23
USP1-203ENST00000442679 IPO9Q96P70 1041 aaKnown RBP13.63□□□□□ -0.23
USP1-203ENST00000442679 C2orf40Q9H1Z8 148 aa13.63□□□□□ -0.23
USP1-203ENST00000442679 C17orf75Q9HAS0 396 aa13.63□□□□□ -0.23
USP1-203ENST00000442679 CHST12Q9NRB3 414 aa13.63□□□□□ -0.23
USP1-203ENST00000442679 MSRAQ9UJ68 235 aa13.63□□□□□ -0.23
USP1-203ENST00000442679 PIN4Q9Y237 131 aaKnown RBP13.63□□□□□ -0.23
USP1-203ENST00000442679 CCDC169A6NNP5 214 aa13.62□□□□□ -0.23
USP1-203ENST00000442679 POLR2DO15514 142 aaKnown RBP13.62□□□□□ -0.23
USP1-203ENST00000442679 TLL1O43897 1013 aa13.62□□□□□ -0.23
USP1-203ENST00000442679 ERLIN2O94905 339 aa13.62□□□□□ -0.23
USP1-203ENST00000442679 GJB5O95377 273 aa13.62□□□□□ -0.23
USP1-203ENST00000442679 IBSPP21815 317 aaPredicted RBP13.62□□□□□ -0.23
USP1-203ENST00000442679 NPTX2P47972 431 aa13.62□□□□□ -0.23
USP1-203ENST00000442679 NCBP1Q09161 790 aaKnown RBP13.62□□□□□ -0.23
USP1-203ENST00000442679 DMP1Q13316 513 aaPredicted RBP13.62□□□□□ -0.23
USP1-203ENST00000442679 GIT2Q14161 759 aa13.62□□□□□ -0.23
USP1-203ENST00000442679 PCBP1Q15365 356 aaKnown RBP eCLIP13.62□□□□□ -0.23
USP1-203ENST00000442679 RAB30Q15771 203 aa13.62□□□□□ -0.23
USP1-203ENST00000442679 E2F4Q16254 413 aa13.62□□□□□ -0.23
USP1-203ENST00000442679 CDCA2Q69YH5 1023 aaPredicted RBP13.62□□□□□ -0.23
USP1-203ENST00000442679 SLC24A5Q71RS6 500 aa13.62□□□□□ -0.23
USP1-203ENST00000442679 DHX58Q96C10 678 aa13.62□□□□□ -0.23
USP1-203ENST00000442679 RAD9AQ99638 391 aa13.62□□□□□ -0.23
USP1-203ENST00000442679 REEP2Q9BRK0 252 aa13.62□□□□□ -0.23
USP1-203ENST00000442679 PBX4Q9BYU1 374 aa13.62□□□□□ -0.23
USP1-203ENST00000442679 CUEDC2Q9H467 287 aa13.62□□□□□ -0.23
USP1-203ENST00000442679 C1orf112Q9NSG2 853 aa13.62□□□□□ -0.23
USP1-203ENST00000442679 KCNG1Q9UIX4 513 aa13.62□□□□□ -0.23
USP1-203ENST00000442679 KCNH3Q9ULD8 1083 aa13.62□□□□□ -0.23
USP1-203ENST00000442679 ODF2LQ9ULJ1 636 aa13.62□□□□□ -0.23
USP1-203ENST00000442679 PCDHA11Q9Y5I1 949 aa13.62□□□□□ -0.23
USP1-203ENST00000442679 LAMA2P24043 3122 aaKnown RBP13.62□□□□□ -0.23
USP1-203ENST00000442679 LAMA3Q16787 3333 aa13.61□□□□□ -0.23
USP1-203ENST00000442679 A0A1B0GVL5 298 aa13.61□□□□□ -0.23
USP1-203ENST00000442679 MYMKA6NI61 221 aa13.61□□□□□ -0.23
USP1-203ENST00000442679 C9IYK1 514 aa13.61□□□□□ -0.23
USP1-203ENST00000442679 TSPAN1O60635 241 aa13.61□□□□□ -0.23
USP1-203ENST00000442679 FAM13AO94988 1023 aa13.61□□□□□ -0.23
USP1-203ENST00000442679 PLS3P13797 630 aa13.61□□□□□ -0.23
USP1-203ENST00000442679 MYOGP15173 224 aa13.61□□□□□ -0.23
USP1-203ENST00000442679 LIG1P18858 919 aa13.61□□□□□ -0.23
USP1-203ENST00000442679 HOXA11P31270 313 aaPredicted RBP13.61□□□□□ -0.23
USP1-203ENST00000442679 SARSP49591 514 aaKnown RBP13.61□□□□□ -0.23
USP1-203ENST00000442679 FXR1P51114 621 aaKnown RBP eCLIP13.61□□□□□ -0.23
USP1-203ENST00000442679 EFNA5P52803 228 aa13.61□□□□□ -0.23
USP1-203ENST00000442679 SMTNP53814 917 aa13.61□□□□□ -0.23
USP1-203ENST00000442679 FAM189BP81408 668 aa13.61□□□□□ -0.23
USP1-203ENST00000442679 AMHR2Q16671 573 aa13.61□□□□□ -0.23
USP1-203ENST00000442679 DYMQ7RTS9 669 aa13.61□□□□□ -0.23
USP1-203ENST00000442679 NPAS4Q8IUM7 802 aa13.61□□□□□ -0.23
USP1-203ENST00000442679 MYCT1Q8N699 235 aa13.61□□□□□ -0.23
USP1-203ENST00000442679 PYM1Q9BRP8 204 aaKnown RBP13.61□□□□□ -0.23
USP1-203ENST00000442679 NTPCRQ9BSD7 190 aaKnown RBP13.61□□□□□ -0.23
USP1-203ENST00000442679 KIFC3Q9BVG8 833 aa13.61□□□□□ -0.23
USP1-203ENST00000442679 FZD8Q9H461 694 aa13.61□□□□□ -0.23
USP1-203ENST00000442679 ZHX3Q9H4I2 956 aa13.61□□□□□ -0.23
USP1-203ENST00000442679 KMT5AQ9NQR1 393 aa13.61□□□□□ -0.23
USP1-203ENST00000442679 AGPAT5Q9NUQ2 364 aa13.61□□□□□ -0.23
USP1-203ENST00000442679 PRMT7Q9NVM4 692 aaPredicted RBP13.61□□□□□ -0.23
USP1-203ENST00000442679 DACT1Q9NYF0 836 aa13.61□□□□□ -0.23
USP1-203ENST00000442679 LRFN2Q9ULH4 789 aa13.61□□□□□ -0.23
USP1-203ENST00000442679 PCDHB7Q9Y5E2 793 aa13.61□□□□□ -0.23
USP1-203ENST00000442679 TRIOBPQ9H2D6 2365 aa13.6□□□□□ -0.23
USP1-203ENST00000442679 A0A1W2PQ27 194 aa13.6□□□□□ -0.23
USP1-203ENST00000442679 A0A1W2PQ64 194 aa13.6□□□□□ -0.23
USP1-203ENST00000442679 A0A1W2PQD8 194 aa13.6□□□□□ -0.23
USP1-203ENST00000442679 K7ERI5 159 aa13.6□□□□□ -0.23
USP1-203ENST00000442679 TBCAO75347 108 aaKnown RBP13.6□□□□□ -0.23
USP1-203ENST00000442679 STAG3L1P0CL83 205 aa13.6□□□□□ -0.23
USP1-203ENST00000442679 PFKFB1P16118 471 aa13.6□□□□□ -0.23
USP1-203ENST00000442679 DNAJB2P25686 324 aa13.6□□□□□ -0.23
USP1-203ENST00000442679 AXLP30530 894 aa13.6□□□□□ -0.23
USP1-203ENST00000442679 MAPK6Q16659 721 aa13.6□□□□□ -0.23
USP1-203ENST00000442679 TWF2Q6IBS0 349 aaKnown RBP13.6□□□□□ -0.23
USP1-203ENST00000442679 SPIRE2Q8WWL2 714 aa13.6□□□□□ -0.23
USP1-203ENST00000442679 DDX12PQ92771 950 aa13.6□□□□□ -0.23
USP1-203ENST00000442679 STAMQ92783 540 aa13.6□□□□□ -0.23
USP1-203ENST00000442679 TIFAQ96CG3 184 aa13.6□□□□□ -0.23
USP1-203ENST00000442679 CPB2Q96IY4 423 aa13.6□□□□□ -0.23
USP1-203ENST00000442679 LRRC27Q9C0I9 530 aa13.6□□□□□ -0.23
USP1-203ENST00000442679 NKX2-4Q9H2Z4 354 aa13.6□□□□□ -0.23
USP1-203ENST00000442679 PARVGQ9HBI0 331 aa13.6□□□□□ -0.23
USP1-203ENST00000442679 KBTBD4Q9NVX7 518 aa13.6□□□□□ -0.23
USP1-203ENST00000442679 LARSQ9P2J5 1176 aaKnown RBP13.6□□□□□ -0.23
USP1-203ENST00000442679 YBX2Q9Y2T7 364 aaKnown RBP13.6□□□□□ -0.23
USP1-203ENST00000442679 INSL6Q9Y581 213 aa13.6□□□□□ -0.23
USP1-203ENST00000442679 ADGRA3Q8IWK6 1321 aa13.6□□□□□ -0.23
USP1-203ENST00000442679 A0A0U1RQF3 1178 aa13.59□□□□□ -0.23
USP1-203ENST00000442679 GOLGA6L4A6NEF3 574 aa13.59□□□□□ -0.23
USP1-203ENST00000442679 ACKR2O00590 384 aa13.59□□□□□ -0.23
USP1-203ENST00000442679 SLC16A4O15374 487 aa13.59□□□□□ -0.23
USP1-203ENST00000442679 B4GALT5O43286 388 aa13.59□□□□□ -0.23
USP1-203ENST00000442679 PRKCBP05771 671 aa13.59□□□□□ -0.23
USP1-203ENST00000442679 ARF4P18085 180 aaPredicted RBP13.59□□□□□ -0.23
USP1-203ENST00000442679 ZNF131P52739 623 aa13.59□□□□□ -0.23
USP1-203ENST00000442679 HTRA4P83105 476 aaPredicted RBP13.59□□□□□ -0.23
USP1-203ENST00000442679 AMPD3Q01432 767 aa13.59□□□□□ -0.23
USP1-203ENST00000442679 PRPF4BQ13523 1007 aaKnown RBP13.59□□□□□ -0.23
USP1-203ENST00000442679 FAM187BQ17R55 369 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms