RNA–Protein interactions for RNA: ENST00000441821.5

SYN3-204, Transcript of synapsin III, humanhuman

TSL 1 (best)

Gene SYN3, Length 855 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-204ENST00000441821 DNAJB4Q9UDY4 337 aa11.3□□□□□ -0.6
SYN3-204ENST00000441821 DPP7Q9UHL4 492 aa11.3□□□□□ -0.6
SYN3-204ENST00000441821 MYH9P35579 1960 aaKnown RBP11.29□□□□□ -0.6
SYN3-204ENST00000441821 CCDC195A0A1B0GUA6 201 aa11.29□□□□□ -0.6
SYN3-204ENST00000441821 SMCO2A6NFE2 343 aa11.29□□□□□ -0.6
SYN3-204ENST00000441821 hCG_1984214I3L0E3 225 aa11.29□□□□□ -0.6
SYN3-204ENST00000441821 SGSM2O43147 1006 aa11.29□□□□□ -0.6
SYN3-204ENST00000441821 ZNF623O75123 536 aa11.29□□□□□ -0.6
SYN3-204ENST00000441821 CSDE1O75534 798 aaKnown RBP11.29□□□□□ -0.6
SYN3-204ENST00000441821 SETQ01105 290 aaPredicted RBP11.29□□□□□ -0.6
SYN3-204ENST00000441821 RNASELQ05823 741 aaKnown RBP11.29□□□□□ -0.6
SYN3-204ENST00000441821 TTC22Q5TAA0 569 aa11.29□□□□□ -0.6
SYN3-204ENST00000441821 TWF2Q6IBS0 349 aaKnown RBP11.29□□□□□ -0.6
SYN3-204ENST00000441821 ELMSAN1Q6PJG2 1045 aa11.29□□□□□ -0.6
SYN3-204ENST00000441821 RAB11FIP4Q86YS3 637 aa11.29□□□□□ -0.6
SYN3-204ENST00000441821 ZNF713Q8N859 430 aaPredicted RBP11.29□□□□□ -0.6
SYN3-204ENST00000441821 GPR152Q8TDT2 470 aa11.29□□□□□ -0.6
SYN3-204ENST00000441821 LPPQ93052 612 aa11.29□□□□□ -0.6
SYN3-204ENST00000441821 GCOM2Q9BZD3 368 aaPredicted RBP11.29□□□□□ -0.6
SYN3-204ENST00000441821 MAN1C1Q9NR34 630 aa11.29□□□□□ -0.6
SYN3-204ENST00000441821 MRPL17Q9NRX2 175 aaKnown RBP11.29□□□□□ -0.6
SYN3-204ENST00000441821 BARHL2Q9NY43 387 aa11.29□□□□□ -0.6
SYN3-204ENST00000441821 TCEAL9Q9UHQ7 104 aa11.29□□□□□ -0.6
SYN3-204ENST00000441821 RBM8AQ9Y5S9 174 aaKnown RBP11.29□□□□□ -0.6
SYN3-204ENST00000441821 FANCMQ8IYD8 2048 aa11.29□□□□□ -0.6
SYN3-204ENST00000441821 CLUHO75153 1309 aa11.29□□□□□ -0.6
SYN3-204ENST00000441821 CNTNAP5Q8WYK1 1306 aa11.29□□□□□ -0.6
SYN3-204ENST00000441821 CACNA1BQ00975 2339 aa11.28□□□□□ -0.6
SYN3-204ENST00000441821 OTOGLQ3ZCN5 2332 aa11.28□□□□□ -0.6
SYN3-204ENST00000441821 ZNF862O60290 1169 aa11.28□□□□□ -0.6
SYN3-204ENST00000441821 KINO60870 393 aaKnown RBP11.28□□□□□ -0.6
SYN3-204ENST00000441821 PAPLNO95428 1278 aa11.28□□□□□ -0.6
SYN3-204ENST00000441821 OATP04181 439 aa11.28□□□□□ -0.6
SYN3-204ENST00000441821 ALDH2P05091 517 aa11.28□□□□□ -0.6
SYN3-204ENST00000441821 SSBP05455 408 aaKnown RBP eCLIP11.28□□□□□ -0.6
SYN3-204ENST00000441821 ZNF528Q3MIS6 628 aa11.28□□□□□ -0.6
SYN3-204ENST00000441821 SGMS1Q86VZ5 419 aa11.28□□□□□ -0.6
SYN3-204ENST00000441821 MICU3Q86XE3 530 aa11.28□□□□□ -0.6
SYN3-204ENST00000441821 ZNF280BQ86YH2 543 aa11.28□□□□□ -0.6
SYN3-204ENST00000441821 MAML2Q8IZL2 1156 aaPredicted RBP11.28□□□□□ -0.6
SYN3-204ENST00000441821 GPR161Q8N6U8 529 aaKnown RBP11.28□□□□□ -0.6
SYN3-204ENST00000441821 MYADMQ96S97 322 aa11.28□□□□□ -0.6
SYN3-204ENST00000441821 GBP3Q9H0R5 595 aa11.28□□□□□ -0.6
SYN3-204ENST00000441821 ARHGEF3Q9NR81 526 aa11.28□□□□□ -0.6
SYN3-204ENST00000441821 SLC2A4RGQ9NR83 387 aa11.28□□□□□ -0.6
SYN3-204ENST00000441821 FAM105AQ9NUU6 356 aa11.28□□□□□ -0.6
SYN3-204ENST00000441821 RBM28Q9NW13 759 aaKnown RBP11.28□□□□□ -0.6
SYN3-204ENST00000441821 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.28□□□□□ -0.6
SYN3-204ENST00000441821 SSX2IPQ9Y2D8 614 aa11.28□□□□□ -0.6
SYN3-204ENST00000441821 INPP5FQ9Y2H2 1132 aa11.28□□□□□ -0.6
SYN3-204ENST00000441821 SAMM50Q9Y512 469 aa11.28□□□□□ -0.6
SYN3-204ENST00000441821 MEIS3P2A8K0S8 358 aa11.27□□□□□ -0.61
SYN3-204ENST00000441821 WDR64B1ANS9 1081 aa11.27□□□□□ -0.61
SYN3-204ENST00000441821 ANHXE9PGG2 379 aa11.27□□□□□ -0.61
SYN3-204ENST00000441821 INPPL1O15357 1258 aa11.27□□□□□ -0.61
SYN3-204ENST00000441821 B4GALT3O60512 393 aa11.27□□□□□ -0.61
SYN3-204ENST00000441821 ADH1AP07327 375 aa11.27□□□□□ -0.61
SYN3-204ENST00000441821 GLULP15104 373 aa11.27□□□□□ -0.61
SYN3-204ENST00000441821 SFPQP23246 707 aaKnown RBP eCLIP11.27□□□□□ -0.61
SYN3-204ENST00000441821 RAB27AP51159 221 aa11.27□□□□□ -0.61
SYN3-204ENST00000441821 STARD6P59095 220 aa11.27□□□□□ -0.61
SYN3-204ENST00000441821 PRKCEQ02156 737 aa11.27□□□□□ -0.61
SYN3-204ENST00000441821 FUT2Q10981 343 aa11.27□□□□□ -0.61
SYN3-204ENST00000441821 COL9A3Q14050 684 aaPredicted RBP11.27□□□□□ -0.61
SYN3-204ENST00000441821 LONRF3Q496Y0 759 aa11.27□□□□□ -0.61
SYN3-204ENST00000441821 VARS2Q5ST30 1063 aaKnown RBP11.27□□□□□ -0.61
SYN3-204ENST00000441821 JAKMIP3Q5VZ66 844 aa11.27□□□□□ -0.61
SYN3-204ENST00000441821 DCLRE1AQ6PJP8 1040 aa11.27□□□□□ -0.61
SYN3-204ENST00000441821 SYNE3Q6ZMZ3 975 aa11.27□□□□□ -0.61
SYN3-204ENST00000441821 PJA1Q8NG27 643 aa11.27□□□□□ -0.61
SYN3-204ENST00000441821 URGCPQ8TCY9 931 aa11.27□□□□□ -0.61
SYN3-204ENST00000441821 HDAC7Q8WUI4 952 aa11.27□□□□□ -0.61
SYN3-204ENST00000441821 PGBD4Q96DM1 585 aa11.27□□□□□ -0.61
SYN3-204ENST00000441821 RPS6KC1Q96S38 1066 aa11.27□□□□□ -0.61
SYN3-204ENST00000441821 TMEM175Q9BSA9 504 aa11.27□□□□□ -0.61
SYN3-204ENST00000441821 INO80BQ9C086 356 aaPredicted RBP11.27□□□□□ -0.61
SYN3-204ENST00000441821 KANSL3Q9P2N6 904 aa11.27□□□□□ -0.61
SYN3-204ENST00000441821 PIN4Q9Y237 131 aaKnown RBP11.27□□□□□ -0.61
SYN3-204ENST00000441821 FAN1Q9Y2M0 1017 aa11.27□□□□□ -0.61
SYN3-204ENST00000441821 V9GY48 417 aaPredicted RBP11.27□□□□□ -0.61
SYN3-204ENST00000441821 CEP250Q9BV73 2442 aa11.27□□□□□ -0.61
SYN3-204ENST00000441821 A0A087WZ62 844 aa11.26□□□□□ -0.61
SYN3-204ENST00000441821 POTEMA6NI47 508 aa11.26□□□□□ -0.61
SYN3-204ENST00000441821 NRP1O14786 923 aa11.26□□□□□ -0.61
SYN3-204ENST00000441821 SPTLC1O15269 473 aa11.26□□□□□ -0.61
SYN3-204ENST00000441821 TEX28O15482 410 aa11.26□□□□□ -0.61
SYN3-204ENST00000441821 DDHD2O94830 711 aa11.26□□□□□ -0.61
SYN3-204ENST00000441821 GLUD1P00367 558 aa11.26□□□□□ -0.61
SYN3-204ENST00000441821 C1RP00736 705 aa11.26□□□□□ -0.61
SYN3-204ENST00000441821 SOD2P04179 222 aa11.26□□□□□ -0.61
SYN3-204ENST00000441821 LAMP2P13473 410 aa11.26□□□□□ -0.61
SYN3-204ENST00000441821 ATXN1P54253 815 aaKnown RBP11.26□□□□□ -0.61
SYN3-204ENST00000441821 AK2P54819 239 aa11.26□□□□□ -0.61
SYN3-204ENST00000441821 DRP2Q13474 957 aa11.26□□□□□ -0.61
SYN3-204ENST00000441821 TARBP2Q15633 366 aaKnown RBP11.26□□□□□ -0.61
SYN3-204ENST00000441821 KIAA0319Q5VV43 1072 aa11.26□□□□□ -0.61
SYN3-204ENST00000441821 POTEGQ6S5H5 508 aa11.26□□□□□ -0.61
SYN3-204ENST00000441821 SMG7Q92540 1137 aaKnown RBP11.26□□□□□ -0.61
SYN3-204ENST00000441821 ZNF707Q96C28 371 aaPredicted RBP11.26□□□□□ -0.61
SYN3-204ENST00000441821 SHDQ96IW2 340 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms