RNA–Protein interactions for RNA: ENST00000436439.6

HMGCL-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2 BASIC

Gene HMGCL, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-204ENST00000436439 LMAN2LQ9H0V9 348 aa12.18□□□□□ -0.46
HMGCL-204ENST00000436439 CUEDC2Q9H467 287 aa12.18□□□□□ -0.46
HMGCL-204ENST00000436439 ERVK-5Q9HDB9 667 aa12.18□□□□□ -0.46
HMGCL-204ENST00000436439 ZNF302Q9NR11 478 aa12.18□□□□□ -0.46
HMGCL-204ENST00000436439 DISC1Q9NRI5 854 aa12.18□□□□□ -0.46
HMGCL-204ENST00000436439 CCDC39Q9UFE4 941 aa12.18□□□□□ -0.46
HMGCL-204ENST00000436439 VAV3Q9UKW4 847 aa12.18□□□□□ -0.46
HMGCL-204ENST00000436439 GINS2Q9Y248 185 aa12.18□□□□□ -0.46
HMGCL-204ENST00000436439 NOC2LQ9Y3T9 749 aaKnown RBP12.18□□□□□ -0.46
HMGCL-204ENST00000436439 RWDD3Q9Y3V2 267 aa12.18□□□□□ -0.46
HMGCL-204ENST00000436439 COL1A2P08123 1366 aa12.17□□□□□ -0.46
HMGCL-204ENST00000436439 POTEMA6NI47 508 aa12.17□□□□□ -0.46
HMGCL-204ENST00000436439 LINC01565O15544 149 aa12.17□□□□□ -0.46
HMGCL-204ENST00000436439 GPR37L1O60883 481 aa12.17□□□□□ -0.46
HMGCL-204ENST00000436439 ITGB1P05556 798 aa12.17□□□□□ -0.46
HMGCL-204ENST00000436439 SLFN14P0C7P3 912 aa12.17□□□□□ -0.46
HMGCL-204ENST00000436439 IBSPP21815 317 aaPredicted RBP12.17□□□□□ -0.46
HMGCL-204ENST00000436439 NFX1Q12986 1120 aaKnown RBP12.17□□□□□ -0.46
HMGCL-204ENST00000436439 CLUL1Q15846 466 aa12.17□□□□□ -0.46
HMGCL-204ENST00000436439 TMEM31Q5JXX7 168 aa12.17□□□□□ -0.46
HMGCL-204ENST00000436439 LRCH2Q5VUJ6 765 aa12.17□□□□□ -0.46
HMGCL-204ENST00000436439 FAM160B1Q5W0V3 765 aa12.17□□□□□ -0.46
HMGCL-204ENST00000436439 TRMT1LQ7Z2T5 733 aaKnown RBP12.17□□□□□ -0.46
HMGCL-204ENST00000436439 CNNM3Q8NE01 707 aa12.17□□□□□ -0.46
HMGCL-204ENST00000436439 CALML4Q96GE6 196 aa12.17□□□□□ -0.46
HMGCL-204ENST00000436439 MAGEF1Q9HAY2 307 aa12.17□□□□□ -0.46
HMGCL-204ENST00000436439 TBC1D22BQ9NU19 505 aa12.17□□□□□ -0.46
HMGCL-204ENST00000436439 HOOK1Q9UJC3 728 aaKnown RBP12.17□□□□□ -0.46
HMGCL-204ENST00000436439 PLAGL2Q9UPG8 496 aa12.17□□□□□ -0.46
HMGCL-204ENST00000436439 PP2D1A8MPX8 630 aa12.16□□□□□ -0.46
HMGCL-204ENST00000436439 TBX10O75333 385 aa12.16□□□□□ -0.46
HMGCL-204ENST00000436439 C22orf31O95567 290 aa12.16□□□□□ -0.46
HMGCL-204ENST00000436439 MUTP22033 750 aa12.16□□□□□ -0.46
HMGCL-204ENST00000436439 CDC25AP30304 524 aa12.16□□□□□ -0.46
HMGCL-204ENST00000436439 SSTR3P32745 418 aaPredicted RBP12.16□□□□□ -0.46
HMGCL-204ENST00000436439 IRS1P35568 1242 aa12.16□□□□□ -0.46
HMGCL-204ENST00000436439 KARSQ15046 597 aaKnown RBP12.16□□□□□ -0.46
HMGCL-204ENST00000436439 CAMK4Q16566 473 aa12.16□□□□□ -0.46
HMGCL-204ENST00000436439 UVSSAQ2YD98 709 aa12.16□□□□□ -0.46
HMGCL-204ENST00000436439 ZNF484Q5JVG2 852 aa12.16□□□□□ -0.46
HMGCL-204ENST00000436439 KRT79Q5XKE5 535 aa12.16□□□□□ -0.46
HMGCL-204ENST00000436439 HAUS3Q68CZ6 603 aa12.16□□□□□ -0.46
HMGCL-204ENST00000436439 MIS18BP1Q6P0N0 1132 aa12.16□□□□□ -0.46
HMGCL-204ENST00000436439 ADGRD2Q7Z7M1 963 aa12.16□□□□□ -0.46
HMGCL-204ENST00000436439 KLHL23Q8NBE8 558 aa12.16□□□□□ -0.46
HMGCL-204ENST00000436439 SPPL3Q8TCT6 385 aa12.16□□□□□ -0.46
HMGCL-204ENST00000436439 P2RX5Q93086 422 aa12.16□□□□□ -0.46
HMGCL-204ENST00000436439 PLVAPQ9BX97 442 aa12.16□□□□□ -0.46
HMGCL-204ENST00000436439 TEKT3Q9BXF9 490 aa12.16□□□□□ -0.46
HMGCL-204ENST00000436439 NT5C3AQ9H0P0 336 aa12.16□□□□□ -0.46
HMGCL-204ENST00000436439 IGFLR1Q9H665 355 aa12.16□□□□□ -0.46
HMGCL-204ENST00000436439 HCSTQ9UBK5 93 aa12.16□□□□□ -0.46
HMGCL-204ENST00000436439 STK17AQ9UEE5 414 aa12.16□□□□□ -0.46
HMGCL-204ENST00000436439 SERTAD1Q9UHV2 236 aa12.16□□□□□ -0.46
HMGCL-204ENST00000436439 MAFBQ9Y5Q3 323 aaPredicted RBP12.16□□□□□ -0.46
HMGCL-204ENST00000436439 GAS7O60861 476 aa12.15□□□□□ -0.46
HMGCL-204ENST00000436439 RPS6KA5O75582 802 aa12.15□□□□□ -0.46
HMGCL-204ENST00000436439 VTNP04004 478 aa12.15□□□□□ -0.46
HMGCL-204ENST00000436439 MYL1P05976 194 aa12.15□□□□□ -0.46
HMGCL-204ENST00000436439 STAG3L1P0CL83 205 aa12.15□□□□□ -0.46
HMGCL-204ENST00000436439 RPA1P27694 616 aa12.15□□□□□ -0.46
HMGCL-204ENST00000436439 PLA2G5P39877 138 aa12.15□□□□□ -0.46
HMGCL-204ENST00000436439 SARSP49591 514 aaKnown RBP12.15□□□□□ -0.46
HMGCL-204ENST00000436439 ZP2Q05996 745 aa12.15□□□□□ -0.46
HMGCL-204ENST00000436439 KIZQ2M2Z5 673 aa12.15□□□□□ -0.46
HMGCL-204ENST00000436439 PUS10Q3MIT2 529 aaKnown RBP12.15□□□□□ -0.46
HMGCL-204ENST00000436439 TMEM119Q4V9L6 283 aa12.15□□□□□ -0.46
HMGCL-204ENST00000436439 NAALADL2Q58DX5 795 aa12.15□□□□□ -0.46
HMGCL-204ENST00000436439 RRAGBQ5VZM2 374 aa12.15□□□□□ -0.46
HMGCL-204ENST00000436439 ZNF746Q6NUN9 644 aaPredicted RBP12.15□□□□□ -0.46
HMGCL-204ENST00000436439 FAM228AQ86W67 206 aa12.15□□□□□ -0.46
HMGCL-204ENST00000436439 CKAP2LQ8IYA6 745 aa12.15□□□□□ -0.46
HMGCL-204ENST00000436439 CEP57L1Q8IYX8 460 aa12.15□□□□□ -0.46
HMGCL-204ENST00000436439 PIAS4Q8N2W9 510 aaPredicted RBP12.15□□□□□ -0.46
HMGCL-204ENST00000436439 PDILTQ8N807 584 aa12.15□□□□□ -0.46
HMGCL-204ENST00000436439 ERMNQ8TAM6 284 aa12.15□□□□□ -0.46
HMGCL-204ENST00000436439 GJA10Q969M2 543 aa12.15□□□□□ -0.46
HMGCL-204ENST00000436439 DHX58Q96C10 678 aa12.15□□□□□ -0.46
HMGCL-204ENST00000436439 OSMRQ99650 979 aa12.15□□□□□ -0.46
HMGCL-204ENST00000436439 FUCA2Q9BTY2 467 aa12.15□□□□□ -0.46
HMGCL-204ENST00000436439 POLR3CQ9BUI4 534 aaPredicted RBP12.15□□□□□ -0.46
HMGCL-204ENST00000436439 KIAA1468Q9P260 1216 aa12.15□□□□□ -0.46
HMGCL-204ENST00000436439 GABBR1Q9UBS5 961 aa12.15□□□□□ -0.46
HMGCL-204ENST00000436439 ST3GAL5Q9UNP4 418 aa12.15□□□□□ -0.46
HMGCL-204ENST00000436439 PCDHGC5Q9Y5F6 944 aa12.15□□□□□ -0.46
HMGCL-204ENST00000436439 C9IYK1 514 aa12.14□□□□□ -0.47
HMGCL-204ENST00000436439 MBTPS2O43462 519 aa12.14□□□□□ -0.47
HMGCL-204ENST00000436439 ZNF862O60290 1169 aa12.14□□□□□ -0.47
HMGCL-204ENST00000436439 GPR32O75388 356 aa12.14□□□□□ -0.47
HMGCL-204ENST00000436439 PLCG1P19174 1290 aa12.14□□□□□ -0.47
HMGCL-204ENST00000436439 STAT6P42226 847 aa12.14□□□□□ -0.47
HMGCL-204ENST00000436439 CLCN3P51790 818 aa12.14□□□□□ -0.47
HMGCL-204ENST00000436439 ADAM15Q13444 863 aa12.14□□□□□ -0.47
HMGCL-204ENST00000436439 POSTNQ15063 836 aa12.14□□□□□ -0.47
HMGCL-204ENST00000436439 FAM102BQ5T8I3 360 aa12.14□□□□□ -0.47
HMGCL-204ENST00000436439 NT5DC1Q5TFE4 455 aa12.14□□□□□ -0.47
HMGCL-204ENST00000436439 RDM1Q8NG50 284 aa12.14□□□□□ -0.47
HMGCL-204ENST00000436439 SPATA20Q8TB22 786 aa12.14□□□□□ -0.47
HMGCL-204ENST00000436439 SNX29Q8TEQ0 813 aa12.14□□□□□ -0.47
HMGCL-204ENST00000436439 POF1BQ8WVV4 589 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms