RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 ZNF747Q9BV97 191 aa4.79□□□□□ -1.64
CLK1-204ENST00000432425 MS4A5Q9H3V2 200 aa4.79□□□□□ -1.64
CLK1-204ENST00000432425 USP18Q9UMW8 372 aa4.79□□□□□ -1.64
CLK1-204ENST00000432425 NOC2LQ9Y3T9 749 aaKnown RBP4.79□□□□□ -1.64
CLK1-204ENST00000432425 UBE2QL1A1L167 161 aa4.78□□□□□ -1.64
CLK1-204ENST00000432425 LCHNA4D1U4 455 aa4.78□□□□□ -1.64
CLK1-204ENST00000432425 KDM1AO60341 852 aa4.78□□□□□ -1.64
CLK1-204ENST00000432425 NRP2O60462 931 aa4.78□□□□□ -1.64
CLK1-204ENST00000432425 PFKMP08237 780 aa4.78□□□□□ -1.64
CLK1-204ENST00000432425 KIR2DL3P43628 341 aa4.78□□□□□ -1.64
CLK1-204ENST00000432425 NRG3P56975 720 aa4.78□□□□□ -1.64
CLK1-204ENST00000432425 ADAM8P78325 824 aa4.78□□□□□ -1.64
CLK1-204ENST00000432425 CRHR2Q13324 411 aa4.78□□□□□ -1.64
CLK1-204ENST00000432425 BROXQ5VW32 411 aa4.78□□□□□ -1.64
CLK1-204ENST00000432425 CRIP3Q6Q6R5 217 aa4.78□□□□□ -1.64
CLK1-204ENST00000432425 FAM111BQ6SJ93 734 aa4.78□□□□□ -1.64
CLK1-204ENST00000432425 CXorf67Q86X51 503 aaPredicted RBP4.78□□□□□ -1.64
CLK1-204ENST00000432425 THNSL2Q86YJ6 484 aa4.78□□□□□ -1.64
CLK1-204ENST00000432425 THEMISQ8N1K5 641 aaPredicted RBP4.78□□□□□ -1.64
CLK1-204ENST00000432425 TTC1Q99614 292 aa4.78□□□□□ -1.64
CLK1-204ENST00000432425 ZNF341Q9BYN7 854 aa4.78□□□□□ -1.64
CLK1-204ENST00000432425 IFT22Q9H7X7 185 aa4.78□□□□□ -1.64
CLK1-204ENST00000432425 SRRDQ9UH36 339 aa4.78□□□□□ -1.64
CLK1-204ENST00000432425 GIT1Q9Y2X7 761 aa4.78□□□□□ -1.64
CLK1-204ENST00000432425 SH3BP1Q9Y3L3 701 aa4.78□□□□□ -1.64
CLK1-204ENST00000432425 A0A0A6YYK5 440 aaPredicted RBP4.77□□□□□ -1.65
CLK1-204ENST00000432425 PRSS38A1L453 326 aa4.77□□□□□ -1.65
CLK1-204ENST00000432425 BPIP17213 487 aa4.77□□□□□ -1.65
CLK1-204ENST00000432425 SOX5P35711 763 aa4.77□□□□□ -1.65
CLK1-204ENST00000432425 GPR15P49685 360 aa4.77□□□□□ -1.65
CLK1-204ENST00000432425 NPEPPSP55786 919 aa4.77□□□□□ -1.65
CLK1-204ENST00000432425 USP51Q70EK9 711 aa4.77□□□□□ -1.65
CLK1-204ENST00000432425 C1orf210Q8IVY1 113 aa4.77□□□□□ -1.65
CLK1-204ENST00000432425 UNC5BQ8IZJ1 945 aa4.77□□□□□ -1.65
CLK1-204ENST00000432425 GAB3Q8WWW8 586 aa4.77□□□□□ -1.65
CLK1-204ENST00000432425 EXTL1Q92935 676 aa4.77□□□□□ -1.65
CLK1-204ENST00000432425 SOX7Q9BT81 388 aa4.77□□□□□ -1.65
CLK1-204ENST00000432425 CSRNP2Q9H175 543 aa4.77□□□□□ -1.65
CLK1-204ENST00000432425 WNT8AQ9H1J5 351 aa4.77□□□□□ -1.65
CLK1-204ENST00000432425 AURKAIP1Q9NWT8 199 aaPredicted RBP4.77□□□□□ -1.65
CLK1-204ENST00000432425 PPP2R3BQ9Y5P8 575 aa4.77□□□□□ -1.65
CLK1-204ENST00000432425 NRP1O14786 923 aa4.77□□□□□ -1.65
CLK1-204ENST00000432425 MTSS1O43312 755 aa4.77□□□□□ -1.65
CLK1-204ENST00000432425 ZEB2O60315 1214 aa4.77□□□□□ -1.65
CLK1-204ENST00000432425 FSHBP01225 129 aa4.77□□□□□ -1.65
CLK1-204ENST00000432425 GAAP10253 952 aa4.77□□□□□ -1.65
CLK1-204ENST00000432425 GDF5P43026 501 aa4.77□□□□□ -1.65
CLK1-204ENST00000432425 MANFP55145 182 aaKnown RBP4.77□□□□□ -1.65
CLK1-204ENST00000432425 PPARAQ07869 468 aa4.77□□□□□ -1.65
CLK1-204ENST00000432425 STRN3Q13033 797 aa4.77□□□□□ -1.65
CLK1-204ENST00000432425 FOXE3Q13461 319 aa4.77□□□□□ -1.65
CLK1-204ENST00000432425 ELAVL1Q15717 326 aaKnown RBP4.77□□□□□ -1.65
CLK1-204ENST00000432425 CCDC178Q5BJE1 867 aa4.77□□□□□ -1.65
CLK1-204ENST00000432425 FKBP15Q5T1M5 1219 aa4.77□□□□□ -1.65
CLK1-204ENST00000432425 MFSD5Q6N075 450 aa4.77□□□□□ -1.65
CLK1-204ENST00000432425 HDGFL2Q7Z4V5 671 aaPredicted RBP4.77□□□□□ -1.65
CLK1-204ENST00000432425 RNF180Q86T96 592 aa4.77□□□□□ -1.65
CLK1-204ENST00000432425 RASSF3Q86WH2 238 aa4.77□□□□□ -1.65
CLK1-204ENST00000432425 CMTM4Q8IZR5 234 aa4.77□□□□□ -1.65
CLK1-204ENST00000432425 CHAC2Q8WUX2 184 aa4.77□□□□□ -1.65
CLK1-204ENST00000432425 RSAD2Q8WXG1 361 aa4.77□□□□□ -1.65
CLK1-204ENST00000432425 MIEF2Q96C03 454 aa4.77□□□□□ -1.65
CLK1-204ENST00000432425 ANO3Q9BYT9 981 aa4.77□□□□□ -1.65
CLK1-204ENST00000432425 CAAP1Q9H8G2 361 aa4.77□□□□□ -1.65
CLK1-204ENST00000432425 APOBEC2Q9Y235 224 aaKnown RBP4.77□□□□□ -1.65
CLK1-204ENST00000432425 NUMBLQ9Y6R0 609 aa4.77□□□□□ -1.65
CLK1-204ENST00000432425 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.76□□□□□ -1.65
CLK1-204ENST00000432425 FZD7O75084 574 aa4.76□□□□□ -1.65
CLK1-204ENST00000432425 ULK1O75385 1050 aa4.76□□□□□ -1.65
CLK1-204ENST00000432425 CD69Q07108 199 aa4.76□□□□□ -1.65
CLK1-204ENST00000432425 CT47A1Q5JQC4 288 aaPredicted RBP4.76□□□□□ -1.65
CLK1-204ENST00000432425 CCDC62Q6P9F0 684 aa4.76□□□□□ -1.65
CLK1-204ENST00000432425 LMBR1LQ6UX01 489 aa4.76□□□□□ -1.65
CLK1-204ENST00000432425 UBR7Q8N806 425 aa4.76□□□□□ -1.65
CLK1-204ENST00000432425 PPP1R14CQ8TAE6 165 aa4.76□□□□□ -1.65
CLK1-204ENST00000432425 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.76□□□□□ -1.65
CLK1-204ENST00000432425 NEMP1O14524 444 aa4.75□□□□□ -1.65
CLK1-204ENST00000432425 ALDH1A2O94788 518 aa4.75□□□□□ -1.65
CLK1-204ENST00000432425 SEC24DO94855 1032 aaPredicted RBP4.75□□□□□ -1.65
CLK1-204ENST00000432425 CLEC2LP0C7M8 214 aa4.75□□□□□ -1.65
CLK1-204ENST00000432425 SESN3P58005 492 aa4.75□□□□□ -1.65
CLK1-204ENST00000432425 PTH1RQ03431 593 aa4.75□□□□□ -1.65
CLK1-204ENST00000432425 MGAT5Q09328 741 aa4.75□□□□□ -1.65
CLK1-204ENST00000432425 SPIDRQ14159 915 aa4.75□□□□□ -1.65
CLK1-204ENST00000432425 MIIPQ5JXC2 388 aa4.75□□□□□ -1.65
CLK1-204ENST00000432425 SPTY2D1Q68D10 685 aaPredicted RBP4.75□□□□□ -1.65
CLK1-204ENST00000432425 GLB1L2Q8IW92 636 aa4.75□□□□□ -1.65
CLK1-204ENST00000432425 GSPT2Q8IYD1 628 aaKnown RBP4.75□□□□□ -1.65
CLK1-204ENST00000432425 PIK3C3Q8NEB9 887 aa4.75□□□□□ -1.65
CLK1-204ENST00000432425 PLEKHG4BQ96PX9 1271 aa4.75□□□□□ -1.65
CLK1-204ENST00000432425 ING3Q9NXR8 418 aa4.75□□□□□ -1.65
CLK1-204ENST00000432425 MFAP3LO75121 409 aa4.74□□□□□ -1.65
CLK1-204ENST00000432425 IPO13O94829 963 aaKnown RBP4.74□□□□□ -1.65
CLK1-204ENST00000432425 LY86O95711 162 aa4.74□□□□□ -1.65
CLK1-204ENST00000432425 ID4P47928 161 aa4.74□□□□□ -1.65
CLK1-204ENST00000432425 CNGB1Q14028 1251 aaPredicted RBP4.74□□□□□ -1.65
CLK1-204ENST00000432425 ZNF662Q6ZS27 426 aa4.74□□□□□ -1.65
CLK1-204ENST00000432425 Q8N1X5 172 aa4.74□□□□□ -1.65
CLK1-204ENST00000432425 SLC16A11Q8NCK7 471 aa4.74□□□□□ -1.65
CLK1-204ENST00000432425 OR14C36Q8NHC7 312 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms