RNA–Protein interactions for RNA: ENST00000431547.1

RFTN1-202, Transcript of raftlin, lipid raft linker 1, humanhuman

APPRIS ALT2 TSL 5

Gene RFTN1, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFTN1-202ENST00000431547 TBCAO75347 108 aaKnown RBP20.35■□□□□ 0.85
RFTN1-202ENST00000431547 FAM13AO94988 1023 aa20.35■□□□□ 0.85
RFTN1-202ENST00000431547 FGFR4P22455 802 aa20.35■□□□□ 0.85
RFTN1-202ENST00000431547 EFNA5P52803 228 aa20.35■□□□□ 0.85
RFTN1-202ENST00000431547 MBTD1Q05BQ5 628 aa20.35■□□□□ 0.85
RFTN1-202ENST00000431547 CATSPER4Q7RTX7 472 aa20.35■□□□□ 0.85
RFTN1-202ENST00000431547 RTN4RL1Q86UN2 441 aaPredicted RBP20.35■□□□□ 0.85
RFTN1-202ENST00000431547 ZBTB8OSQ8IWT0 167 aa20.35■□□□□ 0.85
RFTN1-202ENST00000431547 STAMQ92783 540 aa20.35■□□□□ 0.85
RFTN1-202ENST00000431547 C7orf25Q9BPX7 421 aa20.35■□□□□ 0.85
RFTN1-202ENST00000431547 KMT5AQ9NQR1 393 aa20.35■□□□□ 0.85
RFTN1-202ENST00000431547 CHST12Q9NRB3 414 aa20.35■□□□□ 0.85
RFTN1-202ENST00000431547 EVPLQ92817 2033 aa20.34■□□□□ 0.85
RFTN1-202ENST00000431547 ZBBXA8MT70 800 aa20.34■□□□□ 0.85
RFTN1-202ENST00000431547 INO80B-WBP1J3KQ70 363 aa20.34■□□□□ 0.85
RFTN1-202ENST00000431547 GADD45BO75293 160 aaPredicted RBP20.34■□□□□ 0.85
RFTN1-202ENST00000431547 ZNF202O95125 648 aa20.34■□□□□ 0.85
RFTN1-202ENST00000431547 SMTNP53814 917 aa20.34■□□□□ 0.85
RFTN1-202ENST00000431547 WDR5P61964 334 aaKnown RBP20.34■□□□□ 0.85
RFTN1-202ENST00000431547 DSC3Q14574 896 aa20.34■□□□□ 0.85
RFTN1-202ENST00000431547 FMR1NBQ8N0W7 255 aaPredicted RBP20.34■□□□□ 0.85
RFTN1-202ENST00000431547 MYCT1Q8N699 235 aa20.34■□□□□ 0.85
RFTN1-202ENST00000431547 ENGASEQ8NFI3 743 aa20.34■□□□□ 0.85
RFTN1-202ENST00000431547 TRIM9Q9C026 710 aa20.34■□□□□ 0.85
RFTN1-202ENST00000431547 TSPYL2Q9H2G4 693 aaPredicted RBP20.34■□□□□ 0.85
RFTN1-202ENST00000431547 FZD8Q9H461 694 aa20.34■□□□□ 0.85
RFTN1-202ENST00000431547 ARHGAP28Q9P2N2 729 aa20.34■□□□□ 0.85
RFTN1-202ENST00000431547 SLC4A7Q9Y6M7 1214 aa20.34■□□□□ 0.85
RFTN1-202ENST00000431547 LOXHD1Q8IVV2 1947 aa20.33■□□□□ 0.85
RFTN1-202ENST00000431547 ADGRA3Q8IWK6 1321 aa20.33■□□□□ 0.85
RFTN1-202ENST00000431547 LOC101059915A0A1B0GWI6 518 aaPredicted RBP20.33■□□□□ 0.85
RFTN1-202ENST00000431547 ZSCAN20P17040 1043 aaPredicted RBP20.33■□□□□ 0.85
RFTN1-202ENST00000431547 SCP2P22307 547 aa20.33■□□□□ 0.85
RFTN1-202ENST00000431547 KCNJ6P48051 423 aa20.33■□□□□ 0.85
RFTN1-202ENST00000431547 FAM160A1Q05DH4 1040 aa20.33■□□□□ 0.85
RFTN1-202ENST00000431547 SNW1Q13573 536 aaKnown RBP20.33■□□□□ 0.85
RFTN1-202ENST00000431547 AMHR2Q16671 573 aa20.33■□□□□ 0.85
RFTN1-202ENST00000431547 FAM187BQ17R55 369 aa20.33■□□□□ 0.85
RFTN1-202ENST00000431547 PHOSPHO2Q8TCD6 241 aa20.33■□□□□ 0.85
RFTN1-202ENST00000431547 LINC01599Q8WXQ3 324 aa20.33■□□□□ 0.85
RFTN1-202ENST00000431547 KCNN1Q92952 543 aa20.33■□□□□ 0.85
RFTN1-202ENST00000431547 PAGE5Q96GU1 130 aa20.33■□□□□ 0.85
RFTN1-202ENST00000431547 PRIMPOLQ96LW4 560 aa20.33■□□□□ 0.85
RFTN1-202ENST00000431547 GBP4Q96PP9 640 aa20.33■□□□□ 0.85
RFTN1-202ENST00000431547 ADAM2Q99965 735 aa20.33■□□□□ 0.85
RFTN1-202ENST00000431547 CCDC113Q9H0I3 377 aa20.33■□□□□ 0.85
RFTN1-202ENST00000431547 TMEM134Q9H6X4 195 aa20.33■□□□□ 0.85
RFTN1-202ENST00000431547 RGS18Q9NS28 235 aa20.33■□□□□ 0.85
RFTN1-202ENST00000431547 AGPAT5Q9NUQ2 364 aa20.33■□□□□ 0.85
RFTN1-202ENST00000431547 PRMT7Q9NVM4 692 aaPredicted RBP20.33■□□□□ 0.85
RFTN1-202ENST00000431547 CEP290O15078 2479 aa20.33■□□□□ 0.84
RFTN1-202ENST00000431547 SCN5AQ14524 2016 aa20.32■□□□□ 0.84
RFTN1-202ENST00000431547 PHLPP2Q6ZVD8 1323 aa20.32■□□□□ 0.84
RFTN1-202ENST00000431547 FRMD3A2A2Y4 597 aa20.32■□□□□ 0.84
RFTN1-202ENST00000431547 DENND3A2RUS2 1198 aa20.32■□□□□ 0.84
RFTN1-202ENST00000431547 H0YCG3 227 aa20.32■□□□□ 0.84
RFTN1-202ENST00000431547 TRAK2O60296 914 aa20.32■□□□□ 0.84
RFTN1-202ENST00000431547 MGEA5O60502 916 aa20.32■□□□□ 0.84
RFTN1-202ENST00000431547 PRPF40AO75400 957 aaKnown RBP20.32■□□□□ 0.84
RFTN1-202ENST00000431547 ERLIN2O94905 339 aa20.32■□□□□ 0.84
RFTN1-202ENST00000431547 GAP43P17677 238 aa20.32■□□□□ 0.84
RFTN1-202ENST00000431547 AXLP30530 894 aa20.32■□□□□ 0.84
RFTN1-202ENST00000431547 HOXA11P31270 313 aaPredicted RBP20.32■□□□□ 0.84
RFTN1-202ENST00000431547 AFMP43652 599 aa20.32■□□□□ 0.84
RFTN1-202ENST00000431547 UBE2HP62256 183 aa20.32■□□□□ 0.84
RFTN1-202ENST00000431547 NCBP1Q09161 790 aaKnown RBP20.32■□□□□ 0.84
RFTN1-202ENST00000431547 MAPK6Q16659 721 aa20.32■□□□□ 0.84
RFTN1-202ENST00000431547 PPP4R3CPQ6ZMV5 832 aa20.32■□□□□ 0.84
RFTN1-202ENST00000431547 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.32■□□□□ 0.84
RFTN1-202ENST00000431547 KRBA2Q6ZNG9 492 aa20.32■□□□□ 0.84
RFTN1-202ENST00000431547 TMEM161BQ8NDZ6 487 aa20.32■□□□□ 0.84
RFTN1-202ENST00000431547 CNNM3Q8NE01 707 aa20.32■□□□□ 0.84
RFTN1-202ENST00000431547 KIFC3Q9BVG8 833 aa20.32■□□□□ 0.84
RFTN1-202ENST00000431547 ZHX3Q9H4I2 956 aa20.32■□□□□ 0.84
RFTN1-202ENST00000431547 SEL1LQ9UBV2 794 aa20.32■□□□□ 0.84
RFTN1-202ENST00000431547 SIP14410 1827 aa20.32■□□□□ 0.84
RFTN1-202ENST00000431547 K7ERI5 159 aa20.31■□□□□ 0.84
RFTN1-202ENST00000431547 ACKR2O00590 384 aa20.31■□□□□ 0.84
RFTN1-202ENST00000431547 SLC16A4O15374 487 aa20.31■□□□□ 0.84
RFTN1-202ENST00000431547 TSPAN1O60635 241 aa20.31■□□□□ 0.84
RFTN1-202ENST00000431547 AMHP03971 560 aa20.31■□□□□ 0.84
RFTN1-202ENST00000431547 MYL1P05976 194 aa20.31■□□□□ 0.84
RFTN1-202ENST00000431547 IDEP14735 1019 aa20.31■□□□□ 0.84
RFTN1-202ENST00000431547 NCKAP1LP55160 1127 aa20.31■□□□□ 0.84
RFTN1-202ENST00000431547 FAM189BP81408 668 aa20.31■□□□□ 0.84
RFTN1-202ENST00000431547 SLC24A5Q71RS6 500 aa20.31■□□□□ 0.84
RFTN1-202ENST00000431547 CCDC65Q8IXS2 484 aa20.31■□□□□ 0.84
RFTN1-202ENST00000431547 SLC17A8Q8NDX2 589 aa20.31■□□□□ 0.84
RFTN1-202ENST00000431547 FIZ1Q96SL8 496 aa20.31■□□□□ 0.84
RFTN1-202ENST00000431547 SLC9A7Q96T83 725 aa20.31■□□□□ 0.84
RFTN1-202ENST00000431547 TRAIPQ9BWF2 469 aa20.31■□□□□ 0.84
RFTN1-202ENST00000431547 C1orf112Q9NSG2 853 aa20.31■□□□□ 0.84
RFTN1-202ENST00000431547 PANK4Q9NVE7 773 aa20.31■□□□□ 0.84
RFTN1-202ENST00000431547 DACT1Q9NYF0 836 aa20.31■□□□□ 0.84
RFTN1-202ENST00000431547 PIN4Q9Y237 131 aaKnown RBP20.31■□□□□ 0.84
RFTN1-202ENST00000431547 TCHHQ07283 1943 aa20.3■□□□□ 0.84
RFTN1-202ENST00000431547 PRKCBP05771 671 aa20.3■□□□□ 0.84
RFTN1-202ENST00000431547 MAPTP10636 758 aaKnown RBP20.3■□□□□ 0.84
RFTN1-202ENST00000431547 ATP2A2P16615 1042 aaKnown RBP20.3■□□□□ 0.84
RFTN1-202ENST00000431547 DEFB103AP81534 67 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms