RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 TMEM221A6NGB7 291 aa16.67■□□□□ 0.26
MSH5-208ENST00000429846 M0R296 226 aa16.67■□□□□ 0.26
MSH5-208ENST00000429846 EML1O00423 815 aa16.67■□□□□ 0.26
MSH5-208ENST00000429846 ZC3H11AO75152 810 aaKnown RBP eCLIP16.67■□□□□ 0.26
MSH5-208ENST00000429846 POLGP54098 1239 aaPredicted RBP16.67■□□□□ 0.26
MSH5-208ENST00000429846 SIGLEC14Q08ET2 396 aa16.67■□□□□ 0.26
MSH5-208ENST00000429846 C4orf19Q8IY42 314 aa16.67■□□□□ 0.26
MSH5-208ENST00000429846 PSPC1Q8WXF1 523 aaKnown RBP16.67■□□□□ 0.26
MSH5-208ENST00000429846 WASF1Q92558 559 aa16.67■□□□□ 0.26
MSH5-208ENST00000429846 PGBD4Q96DM1 585 aa16.67■□□□□ 0.26
MSH5-208ENST00000429846 CEP170P1Q96L14 293 aa16.67■□□□□ 0.26
MSH5-208ENST00000429846 DHX33Q9H6R0 707 aaKnown RBP16.67■□□□□ 0.26
MSH5-208ENST00000429846 IFT122Q9HBG6 1241 aa16.67■□□□□ 0.26
MSH5-208ENST00000429846 AGPAT5Q9NUQ2 364 aa16.67■□□□□ 0.26
MSH5-208ENST00000429846 NR2E1Q9Y466 385 aa16.67■□□□□ 0.26
MSH5-208ENST00000429846 IRAK3Q9Y616 596 aa16.67■□□□□ 0.26
MSH5-208ENST00000429846 CCNT1O60563 726 aaKnown RBP16.66■□□□□ 0.26
MSH5-208ENST00000429846 PFKFB2O60825 505 aa16.66■□□□□ 0.26
MSH5-208ENST00000429846 ANAPC15P60006 121 aa16.66■□□□□ 0.26
MSH5-208ENST00000429846 NHLH1Q02575 133 aa16.66■□□□□ 0.26
MSH5-208ENST00000429846 ANKRD1Q15327 319 aa16.66■□□□□ 0.26
MSH5-208ENST00000429846 EPHA7Q15375 998 aa16.66■□□□□ 0.26
MSH5-208ENST00000429846 NOMO2Q5JPE7 1267 aa16.66■□□□□ 0.26
MSH5-208ENST00000429846 CES5AQ6NT32 575 aa16.66■□□□□ 0.26
MSH5-208ENST00000429846 PIK3AP1Q6ZUJ8 805 aa16.66■□□□□ 0.26
MSH5-208ENST00000429846 SRGAP1Q7Z6B7 1085 aa16.66■□□□□ 0.26
MSH5-208ENST00000429846 DDX53Q86TM3 631 aaKnown RBP16.66■□□□□ 0.26
MSH5-208ENST00000429846 SUGP1Q8IWZ8 645 aaKnown RBP16.66■□□□□ 0.26
MSH5-208ENST00000429846 SLFN12Q8IYM2 578 aa16.66■□□□□ 0.26
MSH5-208ENST00000429846 IGSF21Q96ID5 467 aa16.66■□□□□ 0.26
MSH5-208ENST00000429846 PRRX2Q99811 253 aa16.66■□□□□ 0.26
MSH5-208ENST00000429846 LXNQ9BS40 222 aa16.66■□□□□ 0.26
MSH5-208ENST00000429846 ZBP1Q9H171 429 aa16.66■□□□□ 0.26
MSH5-208ENST00000429846 TBC1D13Q9NVG8 400 aa16.66■□□□□ 0.26
MSH5-208ENST00000429846 KMT2EQ8IZD2 1858 aa16.65■□□□□ 0.26
MSH5-208ENST00000429846 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.65■□□□□ 0.26
MSH5-208ENST00000429846 NT5C1B-RDH14C9J2C7 533 aa16.65■□□□□ 0.26
MSH5-208ENST00000429846 CLASP2O75122 1294 aaKnown RBP16.65■□□□□ 0.26
MSH5-208ENST00000429846 CTSAP10619 480 aa16.65■□□□□ 0.26
MSH5-208ENST00000429846 CA8P35219 290 aa16.65■□□□□ 0.26
MSH5-208ENST00000429846 NPEPPSP55786 919 aa16.65■□□□□ 0.26
MSH5-208ENST00000429846 RNASELQ05823 741 aaKnown RBP16.65■□□□□ 0.26
MSH5-208ENST00000429846 PCBP1Q15365 356 aaKnown RBP eCLIP16.65■□□□□ 0.263e-7■■■■□ 19.3
MSH5-208ENST00000429846 PTPN21Q16825 1174 aa16.65■□□□□ 0.26
MSH5-208ENST00000429846 OTUD6AQ7L8S5 288 aa16.65■□□□□ 0.26
MSH5-208ENST00000429846 KSR1Q8IVT5 923 aa16.65■□□□□ 0.26
MSH5-208ENST00000429846 VPS52Q8N1B4 723 aa16.65■□□□□ 0.26
MSH5-208ENST00000429846 TMEM87AQ8NBN3 555 aa16.65■□□□□ 0.26
MSH5-208ENST00000429846 URGCPQ8TCY9 931 aa16.65■□□□□ 0.26
MSH5-208ENST00000429846 TCP11Q8WWU5 503 aa16.65■□□□□ 0.26
MSH5-208ENST00000429846 HAS1Q92839 578 aa16.65■□□□□ 0.26
MSH5-208ENST00000429846 LPPQ93052 612 aa16.65■□□□□ 0.26
MSH5-208ENST00000429846 PBXIP1Q96AQ6 731 aa16.65■□□□□ 0.26
MSH5-208ENST00000429846 ADAM7Q9H2U9 754 aa16.65■□□□□ 0.26
MSH5-208ENST00000429846 BRMS1Q9HCU9 246 aa16.65■□□□□ 0.26
MSH5-208ENST00000429846 DZANK1Q9NVP4 752 aa16.65■□□□□ 0.26
MSH5-208ENST00000429846 TPCN1Q9ULQ1 816 aa16.65■□□□□ 0.26
MSH5-208ENST00000429846 TRIOO75962 3097 aa16.65■□□□□ 0.26
MSH5-208ENST00000429846 CNTNAP2Q9UHC6 1331 aa16.65■□□□□ 0.26
MSH5-208ENST00000429846 ZDBF2Q9HCK1 2354 aa16.64■□□□□ 0.25
MSH5-208ENST00000429846 ASAP2O43150 1006 aa16.64■□□□□ 0.25
MSH5-208ENST00000429846 MARCH6O60337 910 aa16.64■□□□□ 0.25
MSH5-208ENST00000429846 OFD1O75665 1012 aa16.64■□□□□ 0.25
MSH5-208ENST00000429846 BAG4O95429 457 aaKnown RBP16.64■□□□□ 0.25
MSH5-208ENST00000429846 YWHABP31946 246 aaKnown RBP16.64■□□□□ 0.25
MSH5-208ENST00000429846 POTEDQ86YR6 584 aa16.64■□□□□ 0.25
MSH5-208ENST00000429846 PRPF31Q8WWY3 499 aaKnown RBP16.64■□□□□ 0.25
MSH5-208ENST00000429846 RIPOR3Q96MK2 946 aa16.64■□□□□ 0.25
MSH5-208ENST00000429846 ZSWIM4Q9H7M6 989 aa16.64■□□□□ 0.25
MSH5-208ENST00000429846 NRDE2Q9H7Z3 1164 aa16.64■□□□□ 0.25
MSH5-208ENST00000429846 WRAP73Q9P2S5 460 aaPredicted RBP16.64■□□□□ 0.25
MSH5-208ENST00000429846 INPP5FQ9Y2H2 1132 aa16.64■□□□□ 0.25
MSH5-208ENST00000429846 PCDHB2Q9Y5E7 798 aa16.64■□□□□ 0.25
MSH5-208ENST00000429846 CXCL14O95715 111 aa16.63■□□□□ 0.25
MSH5-208ENST00000429846 GALTP07902 379 aa16.63■□□□□ 0.25
MSH5-208ENST00000429846 KRT2P35908 639 aa16.63■□□□□ 0.25
MSH5-208ENST00000429846 MTHFRP42898 656 aa16.63■□□□□ 0.25
MSH5-208ENST00000429846 SPIRE1Q08AE8 756 aa16.63■□□□□ 0.25
MSH5-208ENST00000429846 LAMTOR4Q0VGL1 99 aa16.63■□□□□ 0.25
MSH5-208ENST00000429846 EMC2Q15006 297 aa16.63■□□□□ 0.25
MSH5-208ENST00000429846 ZBTB33Q86T24 672 aa16.63■□□□□ 0.25
MSH5-208ENST00000429846 ALYREFQ86V81 257 aaKnown RBP16.63■□□□□ 0.25
MSH5-208ENST00000429846 TMEM173Q86WV6 379 aaPredicted RBP16.63■□□□□ 0.25
MSH5-208ENST00000429846 FBXL6Q8N531 539 aa16.63■□□□□ 0.25
MSH5-208ENST00000429846 CNNM3Q8NE01 707 aa16.63■□□□□ 0.25
MSH5-208ENST00000429846 OXER1Q8TDS5 423 aa16.63■□□□□ 0.25
MSH5-208ENST00000429846 TMEM143Q96AN5 459 aa16.63■□□□□ 0.25
MSH5-208ENST00000429846 APOL5Q9BWW9 433 aa16.63■□□□□ 0.25
MSH5-208ENST00000429846 RSAD1Q9HA92 442 aa16.63■□□□□ 0.25
MSH5-208ENST00000429846 KANSL3Q9P2N6 904 aa16.63■□□□□ 0.25
MSH5-208ENST00000429846 ORC3Q9UBD5 711 aaPredicted RBP16.63■□□□□ 0.25
MSH5-208ENST00000429846 DENND4AQ7Z401 1863 aa16.63■□□□□ 0.25
MSH5-208ENST00000429846 MEIS3P2A8K0S8 358 aa16.62■□□□□ 0.25
MSH5-208ENST00000429846 ERLIN2O94905 339 aa16.62■□□□□ 0.25
MSH5-208ENST00000429846 AXLP30530 894 aa16.62■□□□□ 0.25
MSH5-208ENST00000429846 MXD4Q14582 209 aaPredicted RBP16.62■□□□□ 0.25
MSH5-208ENST00000429846 LONRF3Q496Y0 759 aa16.62■□□□□ 0.25
MSH5-208ENST00000429846 NCAPH2Q6IBW4 605 aa16.62■□□□□ 0.25
MSH5-208ENST00000429846 AGMOQ6ZNB7 445 aa16.62■□□□□ 0.25
MSH5-208ENST00000429846 MRPL10Q7Z7H8 261 aaKnown RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 95.4 ms