RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 HLA-DPA1P20036 260 aa9.53□□□□□ -0.88
CTNND1-208ENST00000428599 PEX3P56589 373 aa9.53□□□□□ -0.88
CTNND1-208ENST00000428599 MTMR1Q13613 665 aa9.53□□□□□ -0.88
CTNND1-208ENST00000428599 FAM83BQ5T0W9 1011 aa9.53□□□□□ -0.88
CTNND1-208ENST00000428599 TAS2R42Q7RTR8 314 aa9.53□□□□□ -0.88
CTNND1-208ENST00000428599 TBC1D10CQ8IV04 446 aa9.53□□□□□ -0.88
CTNND1-208ENST00000428599 SMAP1Q8IYB5 467 aaPredicted RBP9.53□□□□□ -0.88
CTNND1-208ENST00000428599 C17orf53Q8N3J3 647 aaPredicted RBP9.53□□□□□ -0.88
CTNND1-208ENST00000428599 TTC13Q8NBP0 860 aa9.53□□□□□ -0.88
CTNND1-208ENST00000428599 RBM41Q96IZ5 413 aaKnown RBP9.53□□□□□ -0.88
CTNND1-208ENST00000428599 KDM4CQ9H3R0 1056 aa9.53□□□□□ -0.88
CTNND1-208ENST00000428599 MRPL40Q9NQ50 206 aaKnown RBP9.53□□□□□ -0.88
CTNND1-208ENST00000428599 IKBKBO14920 756 aa9.53□□□□□ -0.88
CTNND1-208ENST00000428599 NT5C2P49902 561 aa9.53□□□□□ -0.88
CTNND1-208ENST00000428599 TRIM28Q13263 835 aaKnown RBP9.53□□□□□ -0.88
CTNND1-208ENST00000428599 ZSCAN26Q16670 478 aa9.53□□□□□ -0.88
CTNND1-208ENST00000428599 TTC39CQ8N584 583 aa9.53□□□□□ -0.88
CTNND1-208ENST00000428599 SLC44A5Q8NCS7 719 aa9.53□□□□□ -0.88
CTNND1-208ENST00000428599 OPTNQ96CV9 577 aa9.53□□□□□ -0.88
CTNND1-208ENST00000428599 EPB41L5Q9HCM4 733 aa9.53□□□□□ -0.88
CTNND1-208ENST00000428599 TBK1Q9UHD2 729 aa9.53□□□□□ -0.88
CTNND1-208ENST00000428599 A0A1W2PQ27 194 aa9.53□□□□□ -0.88
CTNND1-208ENST00000428599 A0A1W2PQ64 194 aa9.53□□□□□ -0.88
CTNND1-208ENST00000428599 A0A1W2PQD8 194 aa9.53□□□□□ -0.88
CTNND1-208ENST00000428599 USP17L5A8MUK1 530 aa9.53□□□□□ -0.88
CTNND1-208ENST00000428599 FSCBQ5H9T9 825 aa9.53□□□□□ -0.88
CTNND1-208ENST00000428599 ITPRIPL1Q6GPH6 555 aa9.53□□□□□ -0.88
CTNND1-208ENST00000428599 TMED8Q6PL24 325 aaPredicted RBP9.53□□□□□ -0.88
CTNND1-208ENST00000428599 DCUN1D1Q96GG9 259 aa9.53□□□□□ -0.88
CTNND1-208ENST00000428599 CHAMP1Q96JM3 812 aa9.53□□□□□ -0.88
CTNND1-208ENST00000428599 FAM84BQ96KN1 310 aaPredicted RBP9.53□□□□□ -0.88
CTNND1-208ENST00000428599 THAP9Q9H5L6 903 aa9.53□□□□□ -0.88
CTNND1-208ENST00000428599 NDFIP2Q9NV92 336 aa9.53□□□□□ -0.88
CTNND1-208ENST00000428599 CFAP69A5D8W1 941 aa9.53□□□□□ -0.88
CTNND1-208ENST00000428599 PRR5LQ6MZQ0 368 aa9.53□□□□□ -0.88
CTNND1-208ENST00000428599 PIP4K2CQ8TBX8 421 aa9.53□□□□□ -0.88
CTNND1-208ENST00000428599 DCP1AQ9NPI6 582 aaPredicted RBP9.53□□□□□ -0.88
CTNND1-208ENST00000428599 ZNF302Q9NR11 478 aa9.53□□□□□ -0.88
CTNND1-208ENST00000428599 OLFML3Q9NRN5 406 aa9.53□□□□□ -0.88
CTNND1-208ENST00000428599 GTSE1Q9NYZ3 720 aa9.53□□□□□ -0.88
CTNND1-208ENST00000428599 AFF4Q9UHB7 1163 aaKnown RBP9.53□□□□□ -0.88
CTNND1-208ENST00000428599 IQCA1LA6NCM1 817 aa9.52□□□□□ -0.88
CTNND1-208ENST00000428599 CALB1P05937 261 aa9.52□□□□□ -0.88
CTNND1-208ENST00000428599 SMARCA1P28370 1054 aa9.52□□□□□ -0.88
CTNND1-208ENST00000428599 ARL4CP56559 192 aa9.52□□□□□ -0.88
CTNND1-208ENST00000428599 DR1Q01658 176 aa9.52□□□□□ -0.88
CTNND1-208ENST00000428599 RHOT2Q8IXI1 618 aa9.52□□□□□ -0.88
CTNND1-208ENST00000428599 TMEM35BQ8NCS4 154 aa9.52□□□□□ -0.88
CTNND1-208ENST00000428599 AIFM3Q96NN9 605 aa9.52□□□□□ -0.88
CTNND1-208ENST00000428599 POLR3EQ9NVU0 708 aa9.52□□□□□ -0.88
CTNND1-208ENST00000428599 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.52□□□□□ -0.88
CTNND1-208ENST00000428599 GDAQ9Y2T3 454 aa9.52□□□□□ -0.88
CTNND1-208ENST00000428599 UTYO14607 1347 aa9.52□□□□□ -0.88
CTNND1-208ENST00000428599 SYCE1LA8MT33 242 aa9.52□□□□□ -0.88
CTNND1-208ENST00000428599 KBTBD13C9JR72 458 aa9.52□□□□□ -0.88
CTNND1-208ENST00000428599 PFDN1O60925 122 aa9.52□□□□□ -0.88
CTNND1-208ENST00000428599 ZNF189O75820 626 aaPredicted RBP9.52□□□□□ -0.88
CTNND1-208ENST00000428599 CAMTA2O94983 1202 aa9.52□□□□□ -0.88
CTNND1-208ENST00000428599 LARGE1O95461 756 aa9.52□□□□□ -0.88
CTNND1-208ENST00000428599 ESRRAP11474 423 aaPredicted RBP9.52□□□□□ -0.88
CTNND1-208ENST00000428599 DHX9Q08211 1270 aaKnown RBP9.52□□□□□ -0.88
CTNND1-208ENST00000428599 KCTD16Q68DU8 428 aa9.52□□□□□ -0.88
CTNND1-208ENST00000428599 MRFAP1L1Q96HT8 127 aa9.52□□□□□ -0.88
CTNND1-208ENST00000428599 KIF2CQ99661 725 aa9.52□□□□□ -0.88
CTNND1-208ENST00000428599 CYP26B1Q9NR63 512 aa9.52□□□□□ -0.88
CTNND1-208ENST00000428599 TBC1D22BQ9NU19 505 aa9.52□□□□□ -0.88
CTNND1-208ENST00000428599 RWDD2AQ9UIY3 292 aa9.52□□□□□ -0.88
CTNND1-208ENST00000428599 PCDHGB4Q9UN71 923 aa9.52□□□□□ -0.88
CTNND1-208ENST00000428599 KRT38O76015 456 aa9.52□□□□□ -0.89
CTNND1-208ENST00000428599 CD2BP2O95400 341 aaKnown RBP9.52□□□□□ -0.89
CTNND1-208ENST00000428599 CCT5P48643 541 aa9.52□□□□□ -0.89
CTNND1-208ENST00000428599 MED21Q13503 144 aa9.52□□□□□ -0.89
CTNND1-208ENST00000428599 RBBP7Q16576 425 aa9.52□□□□□ -0.89
CTNND1-208ENST00000428599 KYAT1Q16773 422 aa9.52□□□□□ -0.89
CTNND1-208ENST00000428599 TEDDM1Q5T9Z0 273 aa9.52□□□□□ -0.89
CTNND1-208ENST00000428599 SNRNP48Q6IEG0 339 aaKnown RBP9.52□□□□□ -0.89
CTNND1-208ENST00000428599 NSUN6Q8TEA1 469 aaKnown RBP9.52□□□□□ -0.89
CTNND1-208ENST00000428599 PAWRQ96IZ0 340 aaKnown RBP9.52□□□□□ -0.89
CTNND1-208ENST00000428599 DACH2Q96NX9 599 aa9.52□□□□□ -0.89
CTNND1-208ENST00000428599 DIS3Q9Y2L1 958 aaKnown RBP9.52□□□□□ -0.89
CTNND1-208ENST00000428599 GOLGA8MH3BSY2 632 aa9.52□□□□□ -0.89
CTNND1-208ENST00000428599 COPEO14579 308 aa9.52□□□□□ -0.89
CTNND1-208ENST00000428599 MCF2P10911 925 aa9.52□□□□□ -0.89
CTNND1-208ENST00000428599 FCER1AP12319 257 aa9.52□□□□□ -0.89
CTNND1-208ENST00000428599 COPS2P61201 443 aa9.52□□□□□ -0.89
CTNND1-208ENST00000428599 CALR3Q96L12 384 aaKnown RBP9.52□□□□□ -0.89
CTNND1-208ENST00000428599 RMDN3Q96TC7 470 aa9.52□□□□□ -0.89
CTNND1-208ENST00000428599 SYTL2Q9HCH5 934 aa9.52□□□□□ -0.89
CTNND1-208ENST00000428599 LSM7Q9UK45 103 aaKnown RBP9.52□□□□□ -0.89
CTNND1-208ENST00000428599 E9PMD0 336 aa9.52□□□□□ -0.89
CTNND1-208ENST00000428599 ASMTLO95671 621 aa9.52□□□□□ -0.89
CTNND1-208ENST00000428599 TMEM259Q4ZIN3 620 aa9.52□□□□□ -0.89
CTNND1-208ENST00000428599 EFHC2Q5JST6 749 aa9.52□□□□□ -0.89
CTNND1-208ENST00000428599 WDR75Q8IWA0 830 aaKnown RBP9.52□□□□□ -0.89
CTNND1-208ENST00000428599 EEF2KMTQ96G04 330 aa9.52□□□□□ -0.89
CTNND1-208ENST00000428599 TMEM47Q9BQJ4 181 aa9.52□□□□□ -0.89
CTNND1-208ENST00000428599 TRIM55Q9BYV6 548 aa9.52□□□□□ -0.89
CTNND1-208ENST00000428599 TECPR2O15040 1411 aa9.51□□□□□ -0.89
CTNND1-208ENST00000428599 ARHGAP10A1A4S6 786 aa9.51□□□□□ -0.89
CTNND1-208ENST00000428599 WDR91A4D1P6 747 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms