RNA–Protein interactions for RNA: ENST00000427526.6

LIG1-202, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,027 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-202ENST00000427526 BUB1BO60566 1050 aaPredicted RBP15.5■□□□□ 0.07
LIG1-202ENST00000427526 PPP1R37O75864 691 aa15.5■□□□□ 0.07
LIG1-202ENST00000427526 FLT3P36888 993 aa15.5■□□□□ 0.07
LIG1-202ENST00000427526 MDH1P40925 334 aaKnown RBP15.5■□□□□ 0.07
LIG1-202ENST00000427526 TTC31Q49AM3 519 aaPredicted RBP15.5■□□□□ 0.07
LIG1-202ENST00000427526 MAATS1Q7Z4T9 603 aa15.5■□□□□ 0.07
LIG1-202ENST00000427526 WRAP73Q9P2S5 460 aaPredicted RBP15.5■□□□□ 0.07
LIG1-202ENST00000427526 CNOT7Q9UIV1 285 aaKnown RBP15.5■□□□□ 0.07
LIG1-202ENST00000427526 RBBP6Q7Z6E9 1792 aaKnown RBP15.5■□□□□ 0.07
LIG1-202ENST00000427526 MUTP22033 750 aa15.49■□□□□ 0.07
LIG1-202ENST00000427526 CCDC125Q86Z20 511 aa15.49■□□□□ 0.07
LIG1-202ENST00000427526 RFFLQ8WZ73 363 aa15.49■□□□□ 0.07
LIG1-202ENST00000427526 AGPAT3Q9NRZ7 376 aa15.49■□□□□ 0.07
LIG1-202ENST00000427526 AMFRQ9UKV5 643 aa15.49■□□□□ 0.07
LIG1-202ENST00000427526 UBE4BO95155 1302 aa15.49■□□□□ 0.07
LIG1-202ENST00000427526 DDX3YO15523 660 aaKnown RBP15.49■□□□□ 0.07
LIG1-202ENST00000427526 ZNF844Q08AG5 666 aa15.49■□□□□ 0.07
LIG1-202ENST00000427526 PTGISQ16647 500 aa15.49■□□□□ 0.07
LIG1-202ENST00000427526 SGIP1Q9BQI5 828 aa15.49■□□□□ 0.07
LIG1-202ENST00000427526 PAGR1Q9BTK6 254 aa15.49■□□□□ 0.07
LIG1-202ENST00000427526 STRA6Q9BX79 667 aa15.49■□□□□ 0.07
LIG1-202ENST00000427526 PPP1R9AQ9ULJ8 1098 aa15.49■□□□□ 0.07
LIG1-202ENST00000427526 ATXN2Q99700 1313 aaKnown RBP15.49■□□□□ 0.07
LIG1-202ENST00000427526 DAPK3O43293 454 aa15.49■□□□□ 0.07
LIG1-202ENST00000427526 CHMP2AO43633 222 aa15.49■□□□□ 0.07
LIG1-202ENST00000427526 PPP2R5AQ15172 486 aa15.49■□□□□ 0.07
LIG1-202ENST00000427526 DCAF12L1Q5VU92 463 aa15.49■□□□□ 0.07
LIG1-202ENST00000427526 B4GALNT4Q76KP1 1039 aa15.49■□□□□ 0.07
LIG1-202ENST00000427526 LDHDQ86WU2 507 aa15.49■□□□□ 0.07
LIG1-202ENST00000427526 CCDC26Q8TAB7 109 aa15.49■□□□□ 0.07
LIG1-202ENST00000427526 HACL1Q9UJ83 578 aa15.49■□□□□ 0.07
LIG1-202ENST00000427526 IGSF9BQ9UPX0 1349 aa15.49■□□□□ 0.07
LIG1-202ENST00000427526 SRRM3A6NNA2 597 aaPredicted RBP15.48■□□□□ 0.07
LIG1-202ENST00000427526 TTI1O43156 1089 aa15.48■□□□□ 0.07
LIG1-202ENST00000427526 FAM178BQ8IXR5 827 aa15.48■□□□□ 0.07
LIG1-202ENST00000427526 OR2W6PQ8NHA6 318 aa15.48■□□□□ 0.07
LIG1-202ENST00000427526 AGBL1Q96MI9 1066 aa15.48■□□□□ 0.07
LIG1-202ENST00000427526 KCND2Q9NZV8 630 aa15.48■□□□□ 0.07
LIG1-202ENST00000427526 APEX2Q9UBZ4 518 aa15.48■□□□□ 0.07
LIG1-202ENST00000427526 FEM1BQ9UK73 627 aa15.48■□□□□ 0.07
LIG1-202ENST00000427526 ODF2LQ9ULJ1 636 aa15.48■□□□□ 0.07
LIG1-202ENST00000427526 NR2E1Q9Y466 385 aa15.48■□□□□ 0.07
LIG1-202ENST00000427526 FER1L6Q2WGJ9 1857 aa15.48■□□□□ 0.07
LIG1-202ENST00000427526 GCOM1H8Y6P7 765 aaPredicted RBP15.48■□□□□ 0.07
LIG1-202ENST00000427526 MYZAPP0CAP1 466 aa15.48■□□□□ 0.07
LIG1-202ENST00000427526 POLR2MP0CAP2 368 aa15.48■□□□□ 0.07
LIG1-202ENST00000427526 RPS12P25398 132 aaKnown RBP15.48■□□□□ 0.07
LIG1-202ENST00000427526 PLS1Q14651 629 aa15.48■□□□□ 0.07
LIG1-202ENST00000427526 PRAMEF18Q5VWM3 479 aa15.48■□□□□ 0.07
LIG1-202ENST00000427526 B3GNT9Q6UX72 402 aa15.48■□□□□ 0.07
LIG1-202ENST00000427526 FAM160B2Q86V87 743 aa15.48■□□□□ 0.07
LIG1-202ENST00000427526 NLGN2Q8NFZ4 835 aa15.48■□□□□ 0.07
LIG1-202ENST00000427526 LMO3Q8TAP4 145 aa15.48■□□□□ 0.07
LIG1-202ENST00000427526 NACC1Q96RE7 527 aa15.48■□□□□ 0.07
LIG1-202ENST00000427526 INTS2Q9H0H0 1204 aaKnown RBP15.48■□□□□ 0.07
LIG1-202ENST00000427526 DEFB129Q9H1M3 183 aa15.48■□□□□ 0.07
LIG1-202ENST00000427526 DIS3Q9Y2L1 958 aaKnown RBP15.48■□□□□ 0.07
LIG1-202ENST00000427526 FRMD4BQ9Y2L6 1034 aa15.48■□□□□ 0.07
LIG1-202ENST00000427526 CTNNA1P35221 906 aaKnown RBP15.47■□□□□ 0.07
LIG1-202ENST00000427526 TNFAIP1Q13829 316 aa15.47■□□□□ 0.07
LIG1-202ENST00000427526 KCTD19Q17RG1 926 aaPredicted RBP15.47■□□□□ 0.07
LIG1-202ENST00000427526 NBPF12Q5TAG4 269 aaPredicted RBP15.47■□□□□ 0.07
LIG1-202ENST00000427526 NAA35Q5VZE5 725 aa15.47■□□□□ 0.07
LIG1-202ENST00000427526 HS2ST1Q7LGA3 356 aa15.47■□□□□ 0.07
LIG1-202ENST00000427526 SLC9A9Q8IVB4 645 aa15.47■□□□□ 0.07
LIG1-202ENST00000427526 CELF4Q9BZC1 486 aaKnown RBP15.47■□□□□ 0.07
LIG1-202ENST00000427526 CD2APQ9Y5K6 639 aa15.47■□□□□ 0.07
LIG1-202ENST00000427526 GOLGA6L10A6NI86 522 aa15.47■□□□□ 0.07
LIG1-202ENST00000427526 FZD9O00144 591 aa15.47■□□□□ 0.07
LIG1-202ENST00000427526 MYO1FO00160 1098 aa15.47■□□□□ 0.07
LIG1-202ENST00000427526 FGGP02679 453 aa15.47■□□□□ 0.07
LIG1-202ENST00000427526 TRIM49P0CI25 452 aa15.47■□□□□ 0.07
LIG1-202ENST00000427526 TRIM49CP0CI26 452 aa15.47■□□□□ 0.07
LIG1-202ENST00000427526 CYP2J2P51589 502 aa15.47■□□□□ 0.07
LIG1-202ENST00000427526 TRAF1Q13077 416 aa15.47■□□□□ 0.07
LIG1-202ENST00000427526 CEP55Q53EZ4 464 aa15.47■□□□□ 0.07
LIG1-202ENST00000427526 PHLDB3Q6NSJ2 640 aa15.47■□□□□ 0.07
LIG1-202ENST00000427526 TMC3Q7Z5M5 1100 aa15.47■□□□□ 0.07
LIG1-202ENST00000427526 ARHGEF26Q96DR7 871 aa15.47■□□□□ 0.07
LIG1-202ENST00000427526 FZD1Q9UP38 647 aa15.47■□□□□ 0.07
LIG1-202ENST00000427526 DAAM1Q9Y4D1 1078 aa15.47■□□□□ 0.07
LIG1-202ENST00000427526 PLA2G6O60733 806 aa15.46■□□□□ 0.07
LIG1-202ENST00000427526 GAS7O60861 476 aa15.46■□□□□ 0.07
LIG1-202ENST00000427526 PTGER2P43116 358 aa15.46■□□□□ 0.07
LIG1-202ENST00000427526 KIF22Q14807 665 aa15.46■□□□□ 0.07
LIG1-202ENST00000427526 ODR4Q5SWX8 454 aa15.46■□□□□ 0.07
LIG1-202ENST00000427526 SPATS2Q86XZ4 545 aaKnown RBP15.46■□□□□ 0.07
LIG1-202ENST00000427526 MICALL1Q8N3F8 863 aa15.46■□□□□ 0.07
LIG1-202ENST00000427526 CNKSR2Q8WXI2 1034 aa15.46■□□□□ 0.07
LIG1-202ENST00000427526 CTNNBL1Q8WYA6 563 aaPredicted RBP15.46■□□□□ 0.07
LIG1-202ENST00000427526 UNC45AQ9H3U1 944 aa15.46■□□□□ 0.07
LIG1-202ENST00000427526 TAS2R14Q9NYV8 317 aa15.46■□□□□ 0.07
LIG1-202ENST00000427526 SLC12A6Q9UHW9 1150 aa15.46■□□□□ 0.07
LIG1-202ENST00000427526 MRPL11Q9Y3B7 192 aaKnown RBP15.46■□□□□ 0.07
LIG1-202ENST00000427526 ABCB4P21439 1286 aa15.46■□□□□ 0.07
LIG1-202ENST00000427526 GUCY2CP25092 1073 aa15.46■□□□□ 0.07
LIG1-202ENST00000427526 LIG3P49916 1009 aa15.46■□□□□ 0.07
LIG1-202ENST00000427526 SEC24CP53992 1094 aa15.46■□□□□ 0.07
LIG1-202ENST00000427526 BIRC3Q13489 604 aa15.46■□□□□ 0.07
LIG1-202ENST00000427526 MTMR3Q13615 1198 aa15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms