RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 MB21D1Q8N884 522 aa15.33■□□□□ 0.04
PTPN13-203ENST00000427191 OSBPL1AQ9BXW6 950 aa15.33■□□□□ 0.04
PTPN13-203ENST00000427191 PNMA6FA0A0J9YX94 578 aa15.33■□□□□ 0.04
PTPN13-203ENST00000427191 UNC13DQ70J99 1090 aa15.33■□□□□ 0.04
PTPN13-203ENST00000427191 FASTKD5Q7L8L6 764 aaKnown RBP15.33■□□□□ 0.04
PTPN13-203ENST00000427191 KRT27Q7Z3Y8 459 aa15.33■□□□□ 0.04
PTPN13-203ENST00000427191 NSMCE4AQ9NXX6 385 aa15.33■□□□□ 0.04
PTPN13-203ENST00000427191 WDR19Q8NEZ3 1342 aa15.32■□□□□ 0.04
PTPN13-203ENST00000427191 SMAPO00193 183 aa15.32■□□□□ 0.04
PTPN13-203ENST00000427191 ZNF18P17022 549 aa15.32■□□□□ 0.04
PTPN13-203ENST00000427191 HSPA9P38646 679 aaKnown RBP15.32■□□□□ 0.04
PTPN13-203ENST00000427191 RSPH1Q8WYR4 309 aa15.32■□□□□ 0.04
PTPN13-203ENST00000427191 HSPH1Q92598 858 aa15.32■□□□□ 0.04
PTPN13-203ENST00000427191 ADCY3O60266 1144 aa15.32■□□□□ 0.04
PTPN13-203ENST00000427191 UGP2Q16851 508 aa15.32■□□□□ 0.04
PTPN13-203ENST00000427191 ACRBPQ8NEB7 543 aa15.32■□□□□ 0.04
PTPN13-203ENST00000427191 TBCKQ8TEA7 893 aa15.32■□□□□ 0.04
PTPN13-203ENST00000427191 GID8Q9NWU2 228 aa15.32■□□□□ 0.04
PTPN13-203ENST00000427191 BCS1LQ9Y276 419 aa15.32■□□□□ 0.04
PTPN13-203ENST00000427191 ZMYND10O75800 440 aa15.32■□□□□ 0.04
PTPN13-203ENST00000427191 SERPINB1P30740 379 aa15.32■□□□□ 0.04
PTPN13-203ENST00000427191 ADCY1Q08828 1119 aa15.32■□□□□ 0.04
PTPN13-203ENST00000427191 CYLC2Q14093 348 aaPredicted RBP15.32■□□□□ 0.04
PTPN13-203ENST00000427191 STAT4Q14765 748 aa15.32■□□□□ 0.04
PTPN13-203ENST00000427191 CCDC85BQ15834 202 aaPredicted RBP15.32■□□□□ 0.04
PTPN13-203ENST00000427191 SH3GL2Q99962 352 aa15.32■□□□□ 0.04
PTPN13-203ENST00000427191 BFARQ9NZS9 450 aa15.32■□□□□ 0.04
PTPN13-203ENST00000427191 CAB39Q9Y376 341 aaPredicted RBP15.32■□□□□ 0.04
PTPN13-203ENST00000427191 ARIH2O95376 493 aa15.32■□□□□ 0.04
PTPN13-203ENST00000427191 PLCG1P19174 1290 aa15.32■□□□□ 0.04
PTPN13-203ENST00000427191 CDC27P30260 824 aa15.32■□□□□ 0.04
PTPN13-203ENST00000427191 DDIT3P35638 169 aa15.32■□□□□ 0.04
PTPN13-203ENST00000427191 TP53BP2Q13625 1128 aa15.32■□□□□ 0.04
PTPN13-203ENST00000427191 AGGF1Q8N302 714 aaeCLIP15.32■□□□□ 0.04
PTPN13-203ENST00000427191 EIF4A1P60842 406 aaKnown RBP15.32■□□□□ 0.04
PTPN13-203ENST00000427191 EFL1Q7Z2Z2 1120 aaKnown RBP15.32■□□□□ 0.04
PTPN13-203ENST00000427191 TTLL11Q8NHH1 800 aa15.32■□□□□ 0.04
PTPN13-203ENST00000427191 PSMA4P25789 261 aaKnown RBP15.32■□□□□ 0.04
PTPN13-203ENST00000427191 HDLBPQ00341 1268 aaKnown RBP15.32■□□□□ 0.04
PTPN13-203ENST00000427191 SLC10A5Q5PT55 438 aa15.32■□□□□ 0.04
PTPN13-203ENST00000427191 CDR2LQ86X02 465 aaPredicted RBP15.32■□□□□ 0.04
PTPN13-203ENST00000427191 C7orf31Q8N865 590 aa15.32■□□□□ 0.04
PTPN13-203ENST00000427191 FAM161BQ96MY7 647 aa15.32■□□□□ 0.04
PTPN13-203ENST00000427191 MRPL1Q9BYD6 325 aaKnown RBP15.32■□□□□ 0.04
PTPN13-203ENST00000427191 ABHD10Q9NUJ1 306 aa15.32■□□□□ 0.04
PTPN13-203ENST00000427191 SMARCAL1Q9NZC9 954 aa15.32■□□□□ 0.04
PTPN13-203ENST00000427191 STK36Q9NRP7 1315 aa15.32■□□□□ 0.04
PTPN13-203ENST00000427191 TNPO2O14787 897 aaKnown RBP15.32■□□□□ 0.04
PTPN13-203ENST00000427191 ROR1Q01973 937 aa15.32■□□□□ 0.04
PTPN13-203ENST00000427191 NSUN2Q08J23 767 aaKnown RBP eCLIP15.32■□□□□ 0.04
PTPN13-203ENST00000427191 LBRQ14739 615 aaKnown RBP15.32■□□□□ 0.04
PTPN13-203ENST00000427191 KRT24Q2M2I5 525 aa15.32■□□□□ 0.04
PTPN13-203ENST00000427191 NUDT18Q6ZVK8 323 aa15.32■□□□□ 0.04
PTPN13-203ENST00000427191 PCYOX1LQ8NBM8 494 aa15.32■□□□□ 0.04
PTPN13-203ENST00000427191 VIPAS39Q9H9C1 493 aa15.32■□□□□ 0.04
PTPN13-203ENST00000427191 SFMBT1Q9UHJ3 866 aa15.32■□□□□ 0.04
PTPN13-203ENST00000427191 ZSCAN9O15535 394 aaPredicted RBP15.31■□□□□ 0.04
PTPN13-203ENST00000427191 EIF2S1P05198 315 aaKnown RBP15.31■□□□□ 0.04
PTPN13-203ENST00000427191 APOL6Q9BWW8 343 aa15.31■□□□□ 0.04
PTPN13-203ENST00000427191 ETNK1Q9HBU6 452 aa15.31■□□□□ 0.04
PTPN13-203ENST00000427191 SYTL2Q9HCH5 934 aa15.31■□□□□ 0.04
PTPN13-203ENST00000427191 NXF1Q9UBU9 619 aaKnown RBP15.31■□□□□ 0.04
PTPN13-203ENST00000427191 ATP7AQ04656 1500 aa15.31■□□□□ 0.04
PTPN13-203ENST00000427191 LGALS16A8MUM7 142 aa15.31■□□□□ 0.04
PTPN13-203ENST00000427191 BMP3P12645 472 aa15.31■□□□□ 0.04
PTPN13-203ENST00000427191 TCF3P15923 654 aa15.31■□□□□ 0.04
PTPN13-203ENST00000427191 MAGOHP61326 146 aaKnown RBP15.31■□□□□ 0.04
PTPN13-203ENST00000427191 KLC1Q07866 573 aa15.31■□□□□ 0.04
PTPN13-203ENST00000427191 RESP18Q5W5W9 173 aa15.31■□□□□ 0.04
PTPN13-203ENST00000427191 ZHX2Q9Y6X8 837 aa15.31■□□□□ 0.04
PTPN13-203ENST00000427191 PDE8BO95263 885 aa15.31■□□□□ 0.04
PTPN13-203ENST00000427191 RAD51Q06609 339 aa15.31■□□□□ 0.04
PTPN13-203ENST00000427191 SYDE2Q5VT97 1194 aa15.31■□□□□ 0.04
PTPN13-203ENST00000427191 TEX2Q8IWB9 1127 aa15.31■□□□□ 0.04
PTPN13-203ENST00000427191 SDR42E1Q8WUS8 393 aa15.31■□□□□ 0.04
PTPN13-203ENST00000427191 KCNK16Q96T55 309 aa15.31■□□□□ 0.04
PTPN13-203ENST00000427191 KLC4Q9NSK0 619 aa15.31■□□□□ 0.04
PTPN13-203ENST00000427191 SLC1A1P43005 524 aa15.31■□□□□ 0.04
PTPN13-203ENST00000427191 AP1M1Q9BXS5 423 aa15.31■□□□□ 0.04
PTPN13-203ENST00000427191 LZTS3O60299 673 aaPredicted RBP15.31■□□□□ 0.04
PTPN13-203ENST00000427191 PMS1P54277 932 aaKnown RBP15.31■□□□□ 0.04
PTPN13-203ENST00000427191 C16orf72Q14CZ0 275 aa15.31■□□□□ 0.04
PTPN13-203ENST00000427191 NLRP14Q86W24 1093 aa15.31■□□□□ 0.04
PTPN13-203ENST00000427191 PJA2O43164 708 aa15.31■□□□□ 0.04
PTPN13-203ENST00000427191 KCNQ4P56696 695 aa15.31■□□□□ 0.04
PTPN13-203ENST00000427191 LRRC8EQ6NSJ5 796 aa15.31■□□□□ 0.04
PTPN13-203ENST00000427191 FBXO38Q6PIJ6 1188 aa15.31■□□□□ 0.04
PTPN13-203ENST00000427191 CATSPER3Q86XQ3 398 aa15.31■□□□□ 0.04
PTPN13-203ENST00000427191 CNPY3Q9BT09 278 aa15.31■□□□□ 0.04
PTPN13-203ENST00000427191 TBX22Q9Y458 520 aa15.31■□□□□ 0.04
PTPN13-203ENST00000427191 H0Y3Z8 333 aa15.3■□□□□ 0.04
PTPN13-203ENST00000427191 SLC26A4O43511 780 aa15.3■□□□□ 0.04
PTPN13-203ENST00000427191 PALMO75781 387 aa15.3■□□□□ 0.04
PTPN13-203ENST00000427191 PHKA2P46019 1235 aa15.3■□□□□ 0.04
PTPN13-203ENST00000427191 RAD23BP54727 409 aa15.3■□□□□ 0.04
PTPN13-203ENST00000427191 KRT31Q15323 416 aa15.3■□□□□ 0.04
PTPN13-203ENST00000427191 EXT2Q93063 718 aa15.3■□□□□ 0.04
PTPN13-203ENST00000427191 KRCC1Q9NPI7 259 aaPredicted RBP15.3■□□□□ 0.04
PTPN13-203ENST00000427191 ORC4O43929 436 aa15.3■□□□□ 0.04
PTPN13-203ENST00000427191 SPAG6O75602 509 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms