RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 ASIC3Q9UHC3 531 aa14.48□□□□□ -0.09
USP42-203ENST00000426246 STK38LQ9Y2H1 464 aa14.48□□□□□ -0.09
USP42-203ENST00000426246 GMPSP49915 693 aaPredicted RBP14.48□□□□□ -0.09
USP42-203ENST00000426246 GIT2Q14161 759 aa14.48□□□□□ -0.09
USP42-203ENST00000426246 TRIM59Q8IWR1 403 aa14.48□□□□□ -0.09
USP42-203ENST00000426246 CCDC26Q8TAB7 109 aa14.48□□□□□ -0.09
USP42-203ENST00000426246 KDM3AQ9Y4C1 1321 aa14.48□□□□□ -0.09
USP42-203ENST00000426246 A0A087WUV0 522 aaPredicted RBP14.48□□□□□ -0.09
USP42-203ENST00000426246 MARCKSL1P49006 195 aa14.48□□□□□ -0.09
USP42-203ENST00000426246 C1orf54Q8WWF1 131 aa14.48□□□□□ -0.09
USP42-203ENST00000426246 TAF1DQ9H5J8 278 aaPredicted RBP14.48□□□□□ -0.09
USP42-203ENST00000426246 GOLGA6L10A0A0M3HER8 536 aa14.47□□□□□ -0.09
USP42-203ENST00000426246 TESPA1A2RU30 521 aaPredicted RBP14.47□□□□□ -0.09
USP42-203ENST00000426246 MSH4O15457 936 aa14.47□□□□□ -0.09
USP42-203ENST00000426246 EIF2AK2P19525 551 aaKnown RBP14.47□□□□□ -0.09
USP42-203ENST00000426246 ERFP50548 548 aa14.47□□□□□ -0.09
USP42-203ENST00000426246 IFI16Q16666 785 aaKnown RBP14.47□□□□□ -0.09
USP42-203ENST00000426246 BTNL9Q6UXG8 535 aa14.47□□□□□ -0.09
USP42-203ENST00000426246 NLRP14Q86W24 1093 aa14.47□□□□□ -0.09
USP42-203ENST00000426246 PASD1Q8IV76 773 aa14.47□□□□□ -0.09
USP42-203ENST00000426246 ZSWIM2Q8NEG5 633 aa14.47□□□□□ -0.09
USP42-203ENST00000426246 KAT2BQ92831 832 aa14.47□□□□□ -0.09
USP42-203ENST00000426246 ZNF577Q9BSK1 485 aa14.47□□□□□ -0.09
USP42-203ENST00000426246 KLHL11Q9NVR0 708 aa14.47□□□□□ -0.09
USP42-203ENST00000426246 BMP3P12645 472 aa14.47□□□□□ -0.09
USP42-203ENST00000426246 PDIA5Q14554 519 aa14.47□□□□□ -0.09
USP42-203ENST00000426246 FAM102BQ5T8I3 360 aa14.47□□□□□ -0.09
USP42-203ENST00000426246 KAZNQ674X7 775 aa14.47□□□□□ -0.09
USP42-203ENST00000426246 MICALL2Q8IY33 904 aa14.47□□□□□ -0.09
USP42-203ENST00000426246 EFCAB13Q8IY85 973 aa14.47□□□□□ -0.09
USP42-203ENST00000426246 ZNF473Q8WTR7 871 aaKnown RBP14.47□□□□□ -0.09
USP42-203ENST00000426246 ARHGEF26Q96DR7 871 aa14.47□□□□□ -0.09
USP42-203ENST00000426246 ATP6V1G3Q96LB4 118 aa14.47□□□□□ -0.09
USP42-203ENST00000426246 PURBQ96QR8 312 aaKnown RBP14.47□□□□□ -0.09
USP42-203ENST00000426246 P2RX7Q99572 595 aaKnown RBP14.47□□□□□ -0.09
USP42-203ENST00000426246 VIPAS39Q9H9C1 493 aa14.47□□□□□ -0.09
USP42-203ENST00000426246 PPP1R37O75864 691 aa14.47□□□□□ -0.09
USP42-203ENST00000426246 PIAS1O75925 651 aa14.47□□□□□ -0.09
USP42-203ENST00000426246 SEPT14Q6ZU15 432 aa14.47□□□□□ -0.09
USP42-203ENST00000426246 SAMD7Q7Z3H4 446 aa14.47□□□□□ -0.09
USP42-203ENST00000426246 C18orf8Q96DM3 657 aa14.47□□□□□ -0.09
USP42-203ENST00000426246 PI4K2AQ9BTU6 479 aa14.47□□□□□ -0.09
USP42-203ENST00000426246 TMX2Q9Y320 296 aa14.47□□□□□ -0.09
USP42-203ENST00000426246 FOXN3O00409 490 aaPredicted RBP14.46□□□□□ -0.09
USP42-203ENST00000426246 FTLP02792 175 aaPredicted RBP14.46□□□□□ -0.09
USP42-203ENST00000426246 CBWD6Q4V339 395 aa14.46□□□□□ -0.09
USP42-203ENST00000426246 CBWD3Q5JTY5 395 aa14.46□□□□□ -0.09
USP42-203ENST00000426246 CBWD5Q5RIA9 395 aa14.46□□□□□ -0.09
USP42-203ENST00000426246 SYCP2LQ5T4T6 812 aa14.46□□□□□ -0.09
USP42-203ENST00000426246 ICE2Q659A1 982 aa14.46□□□□□ -0.09
USP42-203ENST00000426246 LLGL2Q6P1M3 1020 aa14.46□□□□□ -0.09
USP42-203ENST00000426246 ELAC2Q9BQ52 826 aaKnown RBP14.46□□□□□ -0.09
USP42-203ENST00000426246 DAAM1Q9Y4D1 1078 aa14.46□□□□□ -0.09
USP42-203ENST00000426246 PARP14Q460N5 1801 aa14.46□□□□□ -0.09
USP42-203ENST00000426246 A0A1W2PQJ5 194 aa14.46□□□□□ -0.09
USP42-203ENST00000426246 CAP2P40123 477 aa14.46□□□□□ -0.09
USP42-203ENST00000426246 DLG4P78352 724 aa14.46□□□□□ -0.09
USP42-203ENST00000426246 MYL7Q01449 175 aa14.46□□□□□ -0.09
USP42-203ENST00000426246 PLCB3Q01970 1234 aa14.46□□□□□ -0.09
USP42-203ENST00000426246 SYDE2Q5VT97 1194 aa14.46□□□□□ -0.09
USP42-203ENST00000426246 HAUS1Q96CS2 278 aa14.46□□□□□ -0.09
USP42-203ENST00000426246 FMO2Q99518 471 aa14.46□□□□□ -0.09
USP42-203ENST00000426246 PHIPQ8WWQ0 1821 aa14.46□□□□□ -0.09
USP42-203ENST00000426246 DDX3XO00571 662 aaKnown RBP eCLIP14.46□□□□□ -0.1
USP42-203ENST00000426246 SLC16A4O15374 487 aa14.46□□□□□ -0.1
USP42-203ENST00000426246 DR1Q01658 176 aa14.46□□□□□ -0.1
USP42-203ENST00000426246 PSMD2Q13200 908 aa14.46□□□□□ -0.1
USP42-203ENST00000426246 RASA3Q14644 834 aa14.46□□□□□ -0.1
USP42-203ENST00000426246 CYP4F22Q6NT55 531 aa14.46□□□□□ -0.1
USP42-203ENST00000426246 LRRC45Q96CN5 670 aa14.46□□□□□ -0.1
USP42-203ENST00000426246 PWWP2AQ96N64 755 aa14.46□□□□□ -0.1
USP42-203ENST00000426246 FECHP22830 423 aa14.45□□□□□ -0.1
USP42-203ENST00000426246 PEX3P56589 373 aa14.45□□□□□ -0.1
USP42-203ENST00000426246 ALS2CLQ60I27 953 aa14.45□□□□□ -0.1
USP42-203ENST00000426246 PRUNE1Q86TP1 453 aa14.45□□□□□ -0.1
USP42-203ENST00000426246 LMBR1Q8WVP7 490 aa14.45□□□□□ -0.1
USP42-203ENST00000426246 GLIS2Q9BZE0 524 aaPredicted RBP14.45□□□□□ -0.1
USP42-203ENST00000426246 AZI2Q9H6S1 392 aa14.45□□□□□ -0.1
USP42-203ENST00000426246 FZD1Q9UP38 647 aa14.45□□□□□ -0.1
USP42-203ENST00000426246 DOCK1Q14185 1865 aa14.45□□□□□ -0.1
USP42-203ENST00000426246 LOC102724159A0A0B4J2E5 919 aa14.45□□□□□ -0.1
USP42-203ENST00000426246 RGS16O15492 202 aaPredicted RBP14.45□□□□□ -0.1
USP42-203ENST00000426246 SHBGP04278 402 aa14.45□□□□□ -0.1
USP42-203ENST00000426246 ARP10275 920 aa14.45□□□□□ -0.1
USP42-203ENST00000426246 NPEPPSP55786 919 aa14.45□□□□□ -0.1
USP42-203ENST00000426246 PWP2Q15269 919 aaKnown RBP14.45□□□□□ -0.1
USP42-203ENST00000426246 MEI1Q5TIA1 1274 aa14.45□□□□□ -0.1
USP42-203ENST00000426246 B4GALNT4Q76KP1 1039 aa14.45□□□□□ -0.1
USP42-203ENST00000426246 ATG4AQ8WYN0 398 aa14.45□□□□□ -0.1
USP42-203ENST00000426246 PARVGQ9HBI0 331 aa14.45□□□□□ -0.1
USP42-203ENST00000426246 CNOT7Q9UIV1 285 aaKnown RBP14.45□□□□□ -0.1
USP42-203ENST00000426246 EMSYQ7Z589 1322 aa14.45□□□□□ -0.1
USP42-203ENST00000426246 SSU72P8A0A1W2PR75 194 aa14.45□□□□□ -0.1
USP42-203ENST00000426246 OPLAHO14841 1288 aa14.45□□□□□ -0.1
USP42-203ENST00000426246 CYP26A1O43174 497 aa14.45□□□□□ -0.1
USP42-203ENST00000426246 GNA14O95837 355 aa14.45□□□□□ -0.1
USP42-203ENST00000426246 PSMC2P35998 433 aaKnown RBP14.45□□□□□ -0.1
USP42-203ENST00000426246 BIRC3Q13489 604 aa14.45□□□□□ -0.1
USP42-203ENST00000426246 GSTA5Q7RTV2 222 aa14.45□□□□□ -0.1
USP42-203ENST00000426246 TPCN2Q8NHX9 752 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms