RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 CBWD5Q5RIA9 395 aa28.92■■■□□ 2.22
LDB1-202ENST00000425280 SLC39A4Q6P5W5 647 aa28.92■■■□□ 2.22
LDB1-202ENST00000425280 GLG1Q92896 1179 aa28.92■■■□□ 2.22
LDB1-202ENST00000425280 FAM167AQ96KS9 214 aa28.92■■■□□ 2.22
LDB1-202ENST00000425280 L2HGDHQ9H9P8 463 aa28.92■■■□□ 2.22
LDB1-202ENST00000425280 FHOD1Q9Y613 1164 aa28.92■■■□□ 2.22
LDB1-202ENST00000425280 GPR142Q7Z601 462 aa28.92■■■□□ 2.22
LDB1-202ENST00000425280 TRIM50Q86XT4 487 aa28.92■■■□□ 2.22
LDB1-202ENST00000425280 KCNG1Q9UIX4 513 aa28.92■■■□□ 2.22
LDB1-202ENST00000425280 TRPM7Q96QT4 1865 aa28.91■■■□□ 2.22
LDB1-202ENST00000425280 H0YCG3 227 aa28.91■■■□□ 2.22
LDB1-202ENST00000425280 ZNF263O14978 683 aa28.91■■■□□ 2.22
LDB1-202ENST00000425280 GLRA2P23416 452 aa28.91■■■□□ 2.22
LDB1-202ENST00000425280 KIF11P52732 1056 aa28.91■■■□□ 2.22
LDB1-202ENST00000425280 MAPK8IP2Q13387 824 aaPredicted RBP28.91■■■□□ 2.22
LDB1-202ENST00000425280 RAPGEF1Q13905 1077 aa28.91■■■□□ 2.22
LDB1-202ENST00000425280 FAM110CQ1W6H9 321 aa28.91■■■□□ 2.22
LDB1-202ENST00000425280 TAPT1Q6NXT6 567 aa28.91■■■□□ 2.22
LDB1-202ENST00000425280 AIPL1Q9NZN9 384 aa28.91■■■□□ 2.22
LDB1-202ENST00000425280 FBXL5Q9UKA1 691 aa28.91■■■□□ 2.22
LDB1-202ENST00000425280 IPO7O95373 1038 aaKnown RBP28.9■■■□□ 2.22
LDB1-202ENST00000425280 VAMP7P51809 220 aa28.9■■■□□ 2.22
LDB1-202ENST00000425280 DLG4P78352 724 aa28.9■■■□□ 2.22
LDB1-202ENST00000425280 CYP27A1Q02318 531 aa28.9■■■□□ 2.22
LDB1-202ENST00000425280 CHADLQ6NUI6 762 aa28.9■■■□□ 2.22
LDB1-202ENST00000425280 PLPPR4Q7Z2D5 763 aa28.9■■■□□ 2.22
LDB1-202ENST00000425280 EMSYQ7Z589 1322 aa28.9■■■□□ 2.22
LDB1-202ENST00000425280 SERPING1P05155 500 aa28.9■■■□□ 2.22
LDB1-202ENST00000425280 MARK3P27448 753 aa28.9■■■□□ 2.22
LDB1-202ENST00000425280 ASTE1Q2TB18 679 aaPredicted RBP28.9■■■□□ 2.22
LDB1-202ENST00000425280 ZNF662Q6ZS27 426 aa28.9■■■□□ 2.22
LDB1-202ENST00000425280 ZNF467Q7Z7K2 595 aaPredicted RBP28.9■■■□□ 2.22
LDB1-202ENST00000425280 BBXQ8WY36 941 aaPredicted RBP28.9■■■□□ 2.22
LDB1-202ENST00000425280 HAUS4Q9H6D7 363 aa28.9■■■□□ 2.22
LDB1-202ENST00000425280 TRIM10Q9UDY6 481 aa28.9■■■□□ 2.22
LDB1-202ENST00000425280 SSU72P8A0A1W2PR75 194 aa28.89■■■□□ 2.22
LDB1-202ENST00000425280 GOLGA8IPA6NC78 632 aa28.89■■■□□ 2.22
LDB1-202ENST00000425280 GOLGA8JA6NMD2 632 aa28.89■■■□□ 2.22
LDB1-202ENST00000425280 DYNC1I1O14576 645 aa28.89■■■□□ 2.22
LDB1-202ENST00000425280 MAFO75444 373 aaPredicted RBP28.89■■■□□ 2.22
LDB1-202ENST00000425280 LCA5LO95447 670 aa28.89■■■□□ 2.22
LDB1-202ENST00000425280 ABCD1P33897 745 aa28.89■■■□□ 2.22
LDB1-202ENST00000425280 SLC9C1Q4G0N8 1177 aa28.89■■■□□ 2.22
LDB1-202ENST00000425280 KIAA1328Q86T90 577 aa28.89■■■□□ 2.22
LDB1-202ENST00000425280 DEF6Q9H4E7 631 aa28.89■■■□□ 2.22
LDB1-202ENST00000425280 VTA1Q9NP79 307 aa28.89■■■□□ 2.22
LDB1-202ENST00000425280 AJAP1Q9UKB5 411 aaPredicted RBP28.89■■■□□ 2.22
LDB1-202ENST00000425280 TFR2Q9UP52 801 aa28.89■■■□□ 2.22
LDB1-202ENST00000425280 PPME1Q9Y570 386 aa28.89■■■□□ 2.22
LDB1-202ENST00000425280 CTIFO43310 598 aaKnown RBP28.89■■■□□ 2.21
LDB1-202ENST00000425280 ADRB2P07550 413 aa28.89■■■□□ 2.21
LDB1-202ENST00000425280 NAMPTP43490 491 aa28.89■■■□□ 2.21
LDB1-202ENST00000425280 MYL7Q01449 175 aa28.89■■■□□ 2.21
LDB1-202ENST00000425280 GRB14Q14449 540 aa28.89■■■□□ 2.21
LDB1-202ENST00000425280 SPA17Q15506 151 aa28.89■■■□□ 2.21
LDB1-202ENST00000425280 BRDTQ58F21 947 aaPredicted RBP28.89■■■□□ 2.21
LDB1-202ENST00000425280 ZNF569Q5MCW4 686 aa28.89■■■□□ 2.21
LDB1-202ENST00000425280 PLEKHO2Q8TD55 490 aa28.89■■■□□ 2.21
LDB1-202ENST00000425280 ATP8B4Q8TF62 1192 aa28.89■■■□□ 2.21
LDB1-202ENST00000425280 KCNN1Q92952 543 aa28.89■■■□□ 2.21
LDB1-202ENST00000425280 RCCD1A6NED2 376 aa28.88■■■□□ 2.21
LDB1-202ENST00000425280 TDRD12Q587J7 1177 aaKnown RBP28.88■■■□□ 2.21
LDB1-202ENST00000425280 C1orf220Q5T0J3 134 aa28.88■■■□□ 2.21
LDB1-202ENST00000425280 RASAL3Q86YV0 1011 aa28.88■■■□□ 2.21
LDB1-202ENST00000425280 SAAL1Q96ER3 474 aa28.88■■■□□ 2.21
LDB1-202ENST00000425280 MYO6Q9UM54 1294 aa28.88■■■□□ 2.21
LDB1-202ENST00000425280 AKR1B10O60218 316 aa28.87■■■□□ 2.21
LDB1-202ENST00000425280 MCCD1P59942 119 aaPredicted RBP28.87■■■□□ 2.21
LDB1-202ENST00000425280 ARHGAP1Q07960 439 aa28.87■■■□□ 2.21
LDB1-202ENST00000425280 PLCB4Q15147 1175 aa28.87■■■□□ 2.21
LDB1-202ENST00000425280 ASIC2Q16515 512 aa28.87■■■□□ 2.21
LDB1-202ENST00000425280 CBWD2Q8IUF1 395 aa28.87■■■□□ 2.21
LDB1-202ENST00000425280 TSC1Q92574 1164 aa28.87■■■□□ 2.21
LDB1-202ENST00000425280 JAKMIP2Q96AA8 810 aa28.87■■■□□ 2.21
LDB1-202ENST00000425280 SPAG5Q96R06 1193 aa28.87■■■□□ 2.21
LDB1-202ENST00000425280 CDKN2AIPQ9NXV6 580 aaPredicted RBP28.87■■■□□ 2.21
LDB1-202ENST00000425280 RBM47A0AV96 593 aaKnown RBP28.87■■■□□ 2.21
LDB1-202ENST00000425280 ZBTB42B2RXF5 422 aa28.87■■■□□ 2.21
LDB1-202ENST00000425280 HNRNPDLO14979 420 aaKnown RBP28.87■■■□□ 2.21
LDB1-202ENST00000425280 SNRNP35Q16560 246 aaKnown RBP28.87■■■□□ 2.21
LDB1-202ENST00000425280 GJB7Q6PEY0 223 aa28.87■■■□□ 2.21
LDB1-202ENST00000425280 PLEKHH3Q7Z736 793 aa28.87■■■□□ 2.21
LDB1-202ENST00000425280 DPP9Q86TI2 863 aa28.87■■■□□ 2.21
LDB1-202ENST00000425280 KATNBL1Q9H079 304 aa28.87■■■□□ 2.21
LDB1-202ENST00000425280 INTS2Q9H0H0 1204 aaKnown RBP28.87■■■□□ 2.21
LDB1-202ENST00000425280 MYO1AQ9UBC5 1043 aa28.87■■■□□ 2.21
LDB1-202ENST00000425280 GUCA1BQ9UMX6 200 aa28.87■■■□□ 2.21
LDB1-202ENST00000425280 LRRIQ4A6NIV6 560 aa28.86■■■□□ 2.21
LDB1-202ENST00000425280 URI1O94763 535 aaPredicted RBP28.86■■■□□ 2.21
LDB1-202ENST00000425280 MAPK4P31152 587 aa28.86■■■□□ 2.21
LDB1-202ENST00000425280 VAV2P52735 878 aa28.86■■■□□ 2.21
LDB1-202ENST00000425280 JAM2P57087 298 aa28.86■■■□□ 2.21
LDB1-202ENST00000425280 PPP3CAQ08209 521 aa28.86■■■□□ 2.21
LDB1-202ENST00000425280 CCDC122Q5T0U0 273 aa28.86■■■□□ 2.21
LDB1-202ENST00000425280 IQCEQ6IPM2 695 aa28.86■■■□□ 2.21
LDB1-202ENST00000425280 MAMDC4Q6UXC1 1216 aa28.86■■■□□ 2.21
LDB1-202ENST00000425280 DEPTORQ8TB45 409 aa28.86■■■□□ 2.21
LDB1-202ENST00000425280 POMGNT1Q8WZA1 660 aa28.86■■■□□ 2.21
LDB1-202ENST00000425280 BICD1Q96G01 975 aa28.86■■■□□ 2.21
LDB1-202ENST00000425280 LACRTQ9GZZ8 138 aa28.86■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms