RNA–Protein interactions for RNA: ENST00000424234.6

ACTN4-203, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 1,566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-203ENST00000424234 GTF2IRD1Q9UHL9 959 aa15.49■□□□□ 0.07
ACTN4-203ENST00000424234 NRCAMQ92823 1304 aa15.49■□□□□ 0.07
ACTN4-203ENST00000424234 LTBP2Q14767 1821 aa15.48■□□□□ 0.07
ACTN4-203ENST00000424234 A0A0U1RQG5 324 aaPredicted RBP15.48■□□□□ 0.07
ACTN4-203ENST00000424234 MBLAC1A4D2B0 266 aaPredicted RBP15.48■□□□□ 0.07
ACTN4-203ENST00000424234 GYPCP04921 128 aa15.48■□□□□ 0.07
ACTN4-203ENST00000424234 COL6A1P12109 1028 aa15.48■□□□□ 0.07
ACTN4-203ENST00000424234 POLGP54098 1239 aaPredicted RBP15.48■□□□□ 0.07
ACTN4-203ENST00000424234 TBC1D8BQ0IIM8 1120 aa15.48■□□□□ 0.07
ACTN4-203ENST00000424234 ITGA7Q13683 1181 aa15.48■□□□□ 0.07
ACTN4-203ENST00000424234 C7orf31Q8N865 590 aa15.48■□□□□ 0.07
ACTN4-203ENST00000424234 ATP6V0A4Q9HBG4 840 aa15.48■□□□□ 0.07
ACTN4-203ENST00000424234 PDLIM7Q9NR12 457 aa15.48■□□□□ 0.07
ACTN4-203ENST00000424234 TET1Q8NFU7 2136 aa15.47■□□□□ 0.07
ACTN4-203ENST00000424234 IGKV6-21A0A0C4DH24 114 aa15.47■□□□□ 0.07
ACTN4-203ENST00000424234 NPHP3-ACAD11A0A0J9YXS1 232 aa15.47■□□□□ 0.07
ACTN4-203ENST00000424234 A0A1W2PQC6 194 aa15.47■□□□□ 0.07
ACTN4-203ENST00000424234 RRN3P2A6NIE6 340 aa15.47■□□□□ 0.07
ACTN4-203ENST00000424234 CCNE1P24864 410 aa15.47■□□□□ 0.07
ACTN4-203ENST00000424234 GUCY2CP25092 1073 aa15.47■□□□□ 0.07
ACTN4-203ENST00000424234 CASQ1P31415 396 aa15.47■□□□□ 0.07
ACTN4-203ENST00000424234 CASP14P31944 242 aa15.47■□□□□ 0.07
ACTN4-203ENST00000424234 RFC5P40937 340 aa15.47■□□□□ 0.07
ACTN4-203ENST00000424234 ASIC1P78348 528 aa15.47■□□□□ 0.07
ACTN4-203ENST00000424234 RAD51AP2Q09MP3 1159 aa15.47■□□□□ 0.07
ACTN4-203ENST00000424234 FAM47CQ5HY64 1035 aa15.47■□□□□ 0.07
ACTN4-203ENST00000424234 TTI2Q6NXR4 508 aa15.47■□□□□ 0.07
ACTN4-203ENST00000424234 CNNM4Q6P4Q7 775 aa15.47■□□□□ 0.07
ACTN4-203ENST00000424234 IRF2BP1Q8IU81 584 aa15.47■□□□□ 0.07
ACTN4-203ENST00000424234 TMTC1Q8IUR5 882 aa15.47■□□□□ 0.07
ACTN4-203ENST00000424234 FAM114A1Q8IWE2 563 aa15.47■□□□□ 0.07
ACTN4-203ENST00000424234 LINC01465Q8N7H1 131 aa15.47■□□□□ 0.07
ACTN4-203ENST00000424234 SLC43A3Q8NBI5 491 aa15.47■□□□□ 0.07
ACTN4-203ENST00000424234 ZNF397Q8NF99 534 aaPredicted RBP15.47■□□□□ 0.07
ACTN4-203ENST00000424234 SLC7A3Q8WY07 619 aa15.47■□□□□ 0.07
ACTN4-203ENST00000424234 DDX12PQ92771 950 aa15.47■□□□□ 0.07
ACTN4-203ENST00000424234 VTI1AQ96AJ9 217 aa15.47■□□□□ 0.07
ACTN4-203ENST00000424234 DNAJC19Q96DA6 116 aa15.47■□□□□ 0.07
ACTN4-203ENST00000424234 REEP2Q9BRK0 252 aa15.47■□□□□ 0.07
ACTN4-203ENST00000424234 MAPK8IP1Q9UQF2 711 aa15.47■□□□□ 0.07
ACTN4-203ENST00000424234 TRIP11Q15643 1979 aa15.46■□□□□ 0.07
ACTN4-203ENST00000424234 C17orf102A2RUQ5 167 aa15.46■□□□□ 0.07
ACTN4-203ENST00000424234 LGALS16A8MUM7 142 aa15.46■□□□□ 0.07
ACTN4-203ENST00000424234 RSPH10B2B2RC85 870 aa15.46■□□□□ 0.07
ACTN4-203ENST00000424234 MAFO75444 373 aaPredicted RBP15.46■□□□□ 0.07
ACTN4-203ENST00000424234 RSPH10BP0C881 870 aa15.46■□□□□ 0.07
ACTN4-203ENST00000424234 CAPN2P17655 700 aa15.46■□□□□ 0.07
ACTN4-203ENST00000424234 FXR1P51114 621 aaKnown RBP eCLIP15.46■□□□□ 0.073e-7■■■■□ 19.8
ACTN4-203ENST00000424234 SOX10P56693 466 aa15.46■□□□□ 0.07
ACTN4-203ENST00000424234 ZNF200P98182 395 aaPredicted RBP15.46■□□□□ 0.07
ACTN4-203ENST00000424234 CACNB1Q02641 598 aaPredicted RBP15.46■□□□□ 0.07
ACTN4-203ENST00000424234 MAPK7Q13164 816 aa15.46■□□□□ 0.07
ACTN4-203ENST00000424234 NAA30Q147X3 362 aaPredicted RBP15.46■□□□□ 0.07
ACTN4-203ENST00000424234 GDF6Q6KF10 455 aaPredicted RBP15.46■□□□□ 0.07
ACTN4-203ENST00000424234 MTHFD1LQ6UB35 978 aa15.46■□□□□ 0.07
ACTN4-203ENST00000424234 DYMQ7RTS9 669 aa15.46■□□□□ 0.07
ACTN4-203ENST00000424234 DAW1Q8N136 415 aa15.46■□□□□ 0.07
ACTN4-203ENST00000424234 MCPH1Q8NEM0 835 aa15.46■□□□□ 0.07
ACTN4-203ENST00000424234 CPLX3Q8WVH0 158 aa15.46■□□□□ 0.07
ACTN4-203ENST00000424234 LRRC27Q9C0I9 530 aa15.46■□□□□ 0.07
ACTN4-203ENST00000424234 ADGRG1Q9Y653 693 aa15.46■□□□□ 0.07
ACTN4-203ENST00000424234 CITO14578 2027 aa15.45■□□□□ 0.06
ACTN4-203ENST00000424234 TRIM49BA6NDI0 452 aa15.45■□□□□ 0.06
ACTN4-203ENST00000424234 SOWAHDA6NJG2 315 aa15.45■□□□□ 0.06
ACTN4-203ENST00000424234 TREHO43280 583 aa15.45■□□□□ 0.06
ACTN4-203ENST00000424234 HIP1RO75146 1068 aa15.45■□□□□ 0.06
ACTN4-203ENST00000424234 KLRC1P26715 233 aa15.45■□□□□ 0.06
ACTN4-203ENST00000424234 CLCN3P51790 818 aa15.45■□□□□ 0.06
ACTN4-203ENST00000424234 GNG11P61952 73 aa15.45■□□□□ 0.06
ACTN4-203ENST00000424234 UBXN1Q04323 297 aa15.45■□□□□ 0.06
ACTN4-203ENST00000424234 PTPN11Q06124 597 aaPredicted RBP15.45■□□□□ 0.06
ACTN4-203ENST00000424234 DRP2Q13474 957 aa15.45■□□□□ 0.06
ACTN4-203ENST00000424234 GIT2Q14161 759 aa15.45■□□□□ 0.06
ACTN4-203ENST00000424234 RAD9BQ6WBX8 426 aa15.45■□□□□ 0.06
ACTN4-203ENST00000424234 LRRC71Q8N4P6 559 aa15.45■□□□□ 0.06
ACTN4-203ENST00000424234 P2RX5Q93086 422 aa15.45■□□□□ 0.06
ACTN4-203ENST00000424234 ABHD8Q96I13 439 aa15.45■□□□□ 0.06
ACTN4-203ENST00000424234 SENP6Q9GZR1 1112 aaPredicted RBP15.45■□□□□ 0.06
ACTN4-203ENST00000424234 GPRC5CQ9NQ84 441 aa15.45■□□□□ 0.06
ACTN4-203ENST00000424234 MICAL3Q7RTP6 2002 aa15.45■□□□□ 0.06
ACTN4-203ENST00000424234 PVALEFA0A1B0GWK0 134 aa15.45■□□□□ 0.06
ACTN4-203ENST00000424234 FRMD3A2A2Y4 597 aa15.45■□□□□ 0.06
ACTN4-203ENST00000424234 ARVCFO00192 962 aa15.45■□□□□ 0.06
ACTN4-203ENST00000424234 MAGEB2O15479 319 aa15.45■□□□□ 0.06
ACTN4-203ENST00000424234 GAS2O43903 313 aaKnown RBP15.45■□□□□ 0.06
ACTN4-203ENST00000424234 URI1O94763 535 aaPredicted RBP15.45■□□□□ 0.06
ACTN4-203ENST00000424234 KRT18P05783 430 aaKnown RBP15.45■□□□□ 0.06
ACTN4-203ENST00000424234 EN2P19622 333 aaPredicted RBP15.45■□□□□ 0.06
ACTN4-203ENST00000424234 DNM2P50570 870 aa15.45■□□□□ 0.06
ACTN4-203ENST00000424234 PMS1P54277 932 aaKnown RBP15.45■□□□□ 0.06
ACTN4-203ENST00000424234 MKRN4PQ13434 485 aaPredicted RBP15.45■□□□□ 0.06
ACTN4-203ENST00000424234 SNX17Q15036 470 aa15.45■□□□□ 0.06
ACTN4-203ENST00000424234 CYP26C1Q6V0L0 522 aa15.45■□□□□ 0.06
ACTN4-203ENST00000424234 RUFY4Q6ZNE9 571 aa15.45■□□□□ 0.06
ACTN4-203ENST00000424234 MAEAQ7L5Y9 396 aa15.45■□□□□ 0.06
ACTN4-203ENST00000424234 PAWRQ96IZ0 340 aaKnown RBP15.45■□□□□ 0.06
ACTN4-203ENST00000424234 TIPINQ9BVW5 301 aa15.45■□□□□ 0.06
ACTN4-203ENST00000424234 C11orf49Q9H6J7 331 aa15.45■□□□□ 0.06
ACTN4-203ENST00000424234 ABHD10Q9NUJ1 306 aa15.45■□□□□ 0.06
ACTN4-203ENST00000424234 ODF2LQ9ULJ1 636 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms