RNA–Protein interactions for RNA: ENST00000423998.1

GTF3C2-204, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 5

Gene GTF3C2, Length 828 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-204ENST00000423998 KMT5AQ9NQR1 393 aa15.24■□□□□ 0.03
GTF3C2-204ENST00000423998 SEL1LQ9UBV2 794 aa15.24■□□□□ 0.03
GTF3C2-204ENST00000423998 HOOK1Q9UJC3 728 aaKnown RBP15.24■□□□□ 0.03
GTF3C2-204ENST00000423998 RWDD3Q9Y3V2 267 aa15.24■□□□□ 0.03
GTF3C2-204ENST00000423998 TANC1Q9C0D5 1861 aa15.23■□□□□ 0.03
GTF3C2-204ENST00000423998 A0A1W2PQ27 194 aa15.23■□□□□ 0.03
GTF3C2-204ENST00000423998 A0A1W2PQ64 194 aa15.23■□□□□ 0.03
GTF3C2-204ENST00000423998 A0A1W2PQD8 194 aa15.23■□□□□ 0.03
GTF3C2-204ENST00000423998 HIP1RO75146 1068 aa15.23■□□□□ 0.03
GTF3C2-204ENST00000423998 GJB5O95377 273 aa15.23■□□□□ 0.03
GTF3C2-204ENST00000423998 PLS3P13797 630 aa15.23■□□□□ 0.03
GTF3C2-204ENST00000423998 GAP43P17677 238 aa15.23■□□□□ 0.03
GTF3C2-204ENST00000423998 FAM187BQ17R55 369 aa15.23■□□□□ 0.03
GTF3C2-204ENST00000423998 SPECC1Q5M775 1068 aa15.23■□□□□ 0.03
GTF3C2-204ENST00000423998 RESP18Q5W5W9 173 aa15.23■□□□□ 0.03
GTF3C2-204ENST00000423998 TWF2Q6IBS0 349 aaKnown RBP15.23■□□□□ 0.03
GTF3C2-204ENST00000423998 KSR1Q8IVT5 923 aa15.23■□□□□ 0.03
GTF3C2-204ENST00000423998 ABI1Q8IZP0 508 aa15.23■□□□□ 0.03
GTF3C2-204ENST00000423998 SAMD11Q96NU1 681 aa15.23■□□□□ 0.03
GTF3C2-204ENST00000423998 PPP1R16BQ96T49 567 aa15.23■□□□□ 0.03
GTF3C2-204ENST00000423998 YME1L1Q96TA2 773 aa15.23■□□□□ 0.03
GTF3C2-204ENST00000423998 TRIM6Q9C030 488 aaPredicted RBP15.23■□□□□ 0.03
GTF3C2-204ENST00000423998 TMEM134Q9H6X4 195 aa15.23■□□□□ 0.03
GTF3C2-204ENST00000423998 TMEM161AQ9NX61 479 aa15.23■□□□□ 0.03
GTF3C2-204ENST00000423998 CXXC1Q9P0U4 656 aaPredicted RBP15.23■□□□□ 0.03
GTF3C2-204ENST00000423998 KCNH3Q9ULD8 1083 aa15.23■□□□□ 0.03
GTF3C2-204ENST00000423998 PIN4Q9Y237 131 aaKnown RBP15.23■□□□□ 0.03
GTF3C2-204ENST00000423998 EVPLQ92817 2033 aa15.22■□□□□ 0.03
GTF3C2-204ENST00000423998 A0A087WWV3 80 aa15.22■□□□□ 0.03
GTF3C2-204ENST00000423998 A0A0U1RQF3 1178 aa15.22■□□□□ 0.03
GTF3C2-204ENST00000423998 GRIN1Q05586 938 aa15.22■□□□□ 0.03
GTF3C2-204ENST00000423998 CAPSQ13938 189 aa15.22■□□□□ 0.03
GTF3C2-204ENST00000423998 DHX8Q14562 1220 aaKnown RBP15.22■□□□□ 0.03
GTF3C2-204ENST00000423998 AXDND1Q5T1B0 1012 aaPredicted RBP15.22■□□□□ 0.03
GTF3C2-204ENST00000423998 CCDC65Q8IXS2 484 aa15.22■□□□□ 0.03
GTF3C2-204ENST00000423998 MYCT1Q8N699 235 aa15.22■□□□□ 0.03
GTF3C2-204ENST00000423998 TMEM40Q8WWA1 233 aa15.22■□□□□ 0.03
GTF3C2-204ENST00000423998 CCDC47Q96A33 483 aaKnown RBP15.22■□□□□ 0.03
GTF3C2-204ENST00000423998 AGPAT5Q9NUQ2 364 aa15.22■□□□□ 0.03
GTF3C2-204ENST00000423998 ACKR2O00590 384 aa15.21■□□□□ 0.03
GTF3C2-204ENST00000423998 POLR2DO15514 142 aaKnown RBP15.21■□□□□ 0.03
GTF3C2-204ENST00000423998 ZNF623O75123 536 aa15.21■□□□□ 0.03
GTF3C2-204ENST00000423998 MAPTP10636 758 aaKnown RBP15.21■□□□□ 0.03
GTF3C2-204ENST00000423998 PEX3P56589 373 aa15.21■□□□□ 0.03
GTF3C2-204ENST00000423998 FAM189BP81408 668 aa15.21■□□□□ 0.03
GTF3C2-204ENST00000423998 PRPF4BQ13523 1007 aaKnown RBP15.21■□□□□ 0.03
GTF3C2-204ENST00000423998 ALCAMQ13740 583 aa15.21■□□□□ 0.03
GTF3C2-204ENST00000423998 MCM6Q14566 821 aa15.21■□□□□ 0.03
GTF3C2-204ENST00000423998 ZNF697Q5TEC3 545 aa15.21■□□□□ 0.03
GTF3C2-204ENST00000423998 CDCA2Q69YH5 1023 aaPredicted RBP15.21■□□□□ 0.03
GTF3C2-204ENST00000423998 PPP4R3CPQ6ZMV5 832 aa15.21■□□□□ 0.03
GTF3C2-204ENST00000423998 PDILTQ8N807 584 aa15.21■□□□□ 0.03
GTF3C2-204ENST00000423998 ASAP3Q8TDY4 903 aa15.21■□□□□ 0.03
GTF3C2-204ENST00000423998 TIFAQ96CG3 184 aa15.21■□□□□ 0.03
GTF3C2-204ENST00000423998 VWCEQ96DN2 955 aa15.21■□□□□ 0.03
GTF3C2-204ENST00000423998 PANK2Q9BZ23 570 aa15.21■□□□□ 0.03
GTF3C2-204ENST00000423998 ZHX3Q9H4I2 956 aa15.21■□□□□ 0.03
GTF3C2-204ENST00000423998 AAASQ9NRG9 546 aa15.21■□□□□ 0.03
GTF3C2-204ENST00000423998 BLOC1S4Q9NUP1 217 aa15.21■□□□□ 0.03
GTF3C2-204ENST00000423998 N4BP3O15049 544 aa15.2■□□□□ 0.02
GTF3C2-204ENST00000423998 TRAK2O60296 914 aa15.2■□□□□ 0.02
GTF3C2-204ENST00000423998 UPP2O95045 317 aa15.2■□□□□ 0.02
GTF3C2-204ENST00000423998 DNAJB2P25686 324 aa15.2■□□□□ 0.02
GTF3C2-204ENST00000423998 SYKP43405 635 aa15.2■□□□□ 0.02
GTF3C2-204ENST00000423998 NPTX2P47972 431 aa15.2■□□□□ 0.02
GTF3C2-204ENST00000423998 HSP90AA2PQ14568 343 aaPredicted RBP15.2■□□□□ 0.02
GTF3C2-204ENST00000423998 SHC4Q6S5L8 630 aa15.2■□□□□ 0.02
GTF3C2-204ENST00000423998 KCNK18Q7Z418 384 aa15.2■□□□□ 0.02
GTF3C2-204ENST00000423998 FAM178BQ8IXR5 827 aa15.2■□□□□ 0.02
GTF3C2-204ENST00000423998 MRPS27Q92552 414 aaKnown RBP15.2■□□□□ 0.02
GTF3C2-204ENST00000423998 KCNN1Q92952 543 aa15.2■□□□□ 0.02
GTF3C2-204ENST00000423998 DHX58Q96C10 678 aa15.2■□□□□ 0.02
GTF3C2-204ENST00000423998 RUSC1Q9BVN2 902 aa15.2■□□□□ 0.02
GTF3C2-204ENST00000423998 MRPL4Q9BYD3 311 aaKnown RBP15.2■□□□□ 0.02
GTF3C2-204ENST00000423998 FZD8Q9H461 694 aa15.2■□□□□ 0.02
GTF3C2-204ENST00000423998 GPRC5CQ9NQ84 441 aa15.2■□□□□ 0.02
GTF3C2-204ENST00000423998 KANSL3Q9P2N6 904 aa15.2■□□□□ 0.02
GTF3C2-204ENST00000423998 PCDHB13Q9Y5F0 798 aa15.2■□□□□ 0.02
GTF3C2-204ENST00000423998 A0A1B0GUA9 196 aa15.19■□□□□ 0.02
GTF3C2-204ENST00000423998 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.19■□□□□ 0.02
GTF3C2-204ENST00000423998 C9IYK1 514 aa15.19■□□□□ 0.02
GTF3C2-204ENST00000423998 SLFN14P0C7P3 912 aa15.19■□□□□ 0.02
GTF3C2-204ENST00000423998 ZNF131P52739 623 aa15.19■□□□□ 0.02
GTF3C2-204ENST00000423998 MBTD1Q05BQ5 628 aa15.19■□□□□ 0.02
GTF3C2-204ENST00000423998 GIT2Q14161 759 aa15.19■□□□□ 0.02
GTF3C2-204ENST00000423998 DSC3Q14574 896 aa15.19■□□□□ 0.02
GTF3C2-204ENST00000423998 KYAT1Q16773 422 aa15.19■□□□□ 0.02
GTF3C2-204ENST00000423998 SLC27A1Q6PCB7 646 aa15.19■□□□□ 0.02
GTF3C2-204ENST00000423998 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.19■□□□□ 0.02
GTF3C2-204ENST00000423998 USP49Q70CQ1 688 aa15.19■□□□□ 0.02
GTF3C2-204ENST00000423998 DDX12PQ92771 950 aa15.19■□□□□ 0.02
GTF3C2-204ENST00000423998 HVCN1Q96D96 273 aa15.19■□□□□ 0.02
GTF3C2-204ENST00000423998 ZNF668Q96K58 619 aaPredicted RBP15.19■□□□□ 0.02
GTF3C2-204ENST00000423998 REEP2Q9BRK0 252 aa15.19■□□□□ 0.02
GTF3C2-204ENST00000423998 MRPL9Q9BYD2 267 aaKnown RBP15.19■□□□□ 0.02
GTF3C2-204ENST00000423998 PBX4Q9BYU1 374 aa15.19■□□□□ 0.02
GTF3C2-204ENST00000423998 GTPBP4Q9BZE4 634 aaKnown RBP15.19■□□□□ 0.02
GTF3C2-204ENST00000423998 TMX1Q9H3N1 280 aa15.19■□□□□ 0.02
GTF3C2-204ENST00000423998 KBTBD4Q9NVX7 518 aa15.19■□□□□ 0.02
GTF3C2-204ENST00000423998 EXOC7Q9UPT5 735 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms