RNA–Protein interactions for RNA: ENST00000423141.1

NPC1L1-203, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 2,554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-203ENST00000423141 ZNF287Q9HBT7 754 aa17.97■□□□□ 0.47
NPC1L1-203ENST00000423141 USP40Q9NVE5 1235 aa17.97■□□□□ 0.47
NPC1L1-203ENST00000423141 MTRF1LQ9UGC7 380 aaKnown RBP17.97■□□□□ 0.47
NPC1L1-203ENST00000423141 USP17L15C9J2P7 530 aa17.97■□□□□ 0.47
NPC1L1-203ENST00000423141 USP17L13C9JLJ4 530 aa17.97■□□□□ 0.47
NPC1L1-203ENST00000423141 USP17L11C9JVI0 530 aa17.97■□□□□ 0.47
NPC1L1-203ENST00000423141 USP17L18D6R9N7 530 aa17.97■□□□□ 0.47
NPC1L1-203ENST00000423141 USP17L22D6RA61 530 aa17.97■□□□□ 0.47
NPC1L1-203ENST00000423141 USP17L17D6RBQ6 530 aa17.97■□□□□ 0.47
NPC1L1-203ENST00000423141 USP17L19D6RCP7 530 aa17.97■□□□□ 0.47
NPC1L1-203ENST00000423141 USP17L20D6RJB6 530 aa17.97■□□□□ 0.47
NPC1L1-203ENST00000423141 PDXKO00764 312 aa17.97■□□□□ 0.47
NPC1L1-203ENST00000423141 CALUO43852 315 aaPredicted RBP17.97■□□□□ 0.47
NPC1L1-203ENST00000423141 LMNB1P20700 586 aa17.97■□□□□ 0.47
NPC1L1-203ENST00000423141 BTDP43251 543 aa17.97■□□□□ 0.47
NPC1L1-203ENST00000423141 INHBEP58166 350 aa17.97■□□□□ 0.47
NPC1L1-203ENST00000423141 PPP4CP60510 307 aa17.97■□□□□ 0.47
NPC1L1-203ENST00000423141 MAP2K1Q02750 393 aaPredicted RBP17.97■□□□□ 0.47
NPC1L1-203ENST00000423141 MGAT5Q09328 741 aa17.97■□□□□ 0.47
NPC1L1-203ENST00000423141 USP17L24Q0WX57 530 aa17.97■□□□□ 0.47
NPC1L1-203ENST00000423141 MPP2Q14168 576 aa17.97■□□□□ 0.47
NPC1L1-203ENST00000423141 LLGL1Q15334 1064 aa17.97■□□□□ 0.47
NPC1L1-203ENST00000423141 USP17L6PQ6QN14 398 aa17.97■□□□□ 0.47
NPC1L1-203ENST00000423141 BTNL9Q6UXG8 535 aa17.97■□□□□ 0.47
NPC1L1-203ENST00000423141 TAOK1Q7L7X3 1001 aa17.97■□□□□ 0.47
NPC1L1-203ENST00000423141 ADGRF4Q8IZF3 695 aa17.97■□□□□ 0.47
NPC1L1-203ENST00000423141 ANKLE1Q8NAG6 615 aa17.97■□□□□ 0.47
NPC1L1-203ENST00000423141 ARHGEF2Q92974 986 aaKnown RBP17.97■□□□□ 0.47
NPC1L1-203ENST00000423141 DNAJC12Q9UKB3 198 aa17.97■□□□□ 0.47
NPC1L1-203ENST00000423141 IRS2Q9Y4H2 1338 aa17.97■□□□□ 0.47
NPC1L1-203ENST00000423141 ATP2A2P16615 1042 aaKnown RBP17.96■□□□□ 0.47
NPC1L1-203ENST00000423141 POLD1P28340 1107 aa17.96■□□□□ 0.47
NPC1L1-203ENST00000423141 CGB2Q6NT52 195 aa17.96■□□□□ 0.47
NPC1L1-203ENST00000423141 SPATA21Q7Z572 469 aa17.96■□□□□ 0.47
NPC1L1-203ENST00000423141 CPNE8Q86YQ8 564 aa17.96■□□□□ 0.47
NPC1L1-203ENST00000423141 MARCH10Q8NA82 808 aaPredicted RBP17.96■□□□□ 0.47
NPC1L1-203ENST00000423141 PITPNM2Q9BZ72 1349 aa17.96■□□□□ 0.47
NPC1L1-203ENST00000423141 ARFGEF1Q9Y6D6 1849 aa17.96■□□□□ 0.47
NPC1L1-203ENST00000423141 RARGP13631 454 aa17.96■□□□□ 0.47
NPC1L1-203ENST00000423141 CHRNA3P32297 505 aa17.96■□□□□ 0.47
NPC1L1-203ENST00000423141 ANKRD2Q9GZV1 360 aa17.96■□□□□ 0.47
NPC1L1-203ENST00000423141 KCNK9Q9NPC2 374 aa17.96■□□□□ 0.47
NPC1L1-203ENST00000423141 HOMER3Q9NSC5 361 aa17.96■□□□□ 0.47
NPC1L1-203ENST00000423141 SFI1A8K8P3 1242 aa17.95■□□□□ 0.46
NPC1L1-203ENST00000423141 GJB6O95452 261 aa17.95■□□□□ 0.46
NPC1L1-203ENST00000423141 ADCY1Q08828 1119 aa17.95■□□□□ 0.46
NPC1L1-203ENST00000423141 TBC1D9BQ66K14 1250 aa17.95■□□□□ 0.46
NPC1L1-203ENST00000423141 MFSD5Q6N075 450 aa17.95■□□□□ 0.46
NPC1L1-203ENST00000423141 SEPT14Q6ZU15 432 aa17.95■□□□□ 0.46
NPC1L1-203ENST00000423141 SLC17A8Q8NDX2 589 aa17.95■□□□□ 0.46
NPC1L1-203ENST00000423141 YIPF3Q9GZM5 350 aa17.95■□□□□ 0.46
NPC1L1-203ENST00000423141 TYW1Q9NV66 732 aaKnown RBP17.95■□□□□ 0.46
NPC1L1-203ENST00000423141 NKX1-2Q9UD57 310 aaPredicted RBP17.95■□□□□ 0.46
NPC1L1-203ENST00000423141 PCYOX1Q9UHG3 505 aa17.95■□□□□ 0.46
NPC1L1-203ENST00000423141 BCS1LQ9Y276 419 aa17.95■□□□□ 0.46
NPC1L1-203ENST00000423141 DOT1LQ8TEK3 1739 aa17.95■□□□□ 0.46
NPC1L1-203ENST00000423141 PNMA6FA0A0J9YX94 578 aa17.95■□□□□ 0.46
NPC1L1-203ENST00000423141 LRRN2O75325 713 aa17.95■□□□□ 0.46
NPC1L1-203ENST00000423141 GCNT3O95395 438 aa17.95■□□□□ 0.46
NPC1L1-203ENST00000423141 CTNNA2P26232 953 aa17.95■□□□□ 0.46
NPC1L1-203ENST00000423141 KCNQ4P56696 695 aa17.95■□□□□ 0.46
NPC1L1-203ENST00000423141 BLMHQ13867 455 aa17.95■□□□□ 0.46
NPC1L1-203ENST00000423141 SLMAPQ14BN4 828 aa17.95■□□□□ 0.46
NPC1L1-203ENST00000423141 ARHGAP44Q17R89 818 aa17.95■□□□□ 0.46
NPC1L1-203ENST00000423141 UTP4Q969X6 686 aaKnown RBP17.95■□□□□ 0.46
NPC1L1-203ENST00000423141 RUSC1Q9BVN2 902 aa17.95■□□□□ 0.46
NPC1L1-203ENST00000423141 STMN4Q9H169 189 aaPredicted RBP17.95■□□□□ 0.46
NPC1L1-203ENST00000423141 CDC42EP4Q9H3Q1 356 aaKnown RBP17.95■□□□□ 0.46
NPC1L1-203ENST00000423141 PSTPIP2Q9H939 334 aa17.95■□□□□ 0.46
NPC1L1-203ENST00000423141 RXFP1Q9HBX9 757 aa17.95■□□□□ 0.46
NPC1L1-203ENST00000423141 METTL14Q9HCE5 456 aaKnown RBP17.95■□□□□ 0.46
NPC1L1-203ENST00000423141 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.95■□□□□ 0.467e-6■■■■□ 21.9
NPC1L1-203ENST00000423141 ARL2BPQ9Y2Y0 163 aa17.95■□□□□ 0.46
NPC1L1-203ENST00000423141 UBAP1LF5GYI3 381 aa17.94■□□□□ 0.46
NPC1L1-203ENST00000423141 KIF3CO14782 793 aa17.94■□□□□ 0.46
NPC1L1-203ENST00000423141 TNIP1Q15025 636 aa17.94■□□□□ 0.46
NPC1L1-203ENST00000423141 CBWD6Q4V339 395 aa17.94■□□□□ 0.46
NPC1L1-203ENST00000423141 CBWD3Q5JTY5 395 aa17.94■□□□□ 0.46
NPC1L1-203ENST00000423141 CBWD5Q5RIA9 395 aa17.94■□□□□ 0.46
NPC1L1-203ENST00000423141 CCDC105Q8IYK2 499 aa17.94■□□□□ 0.46
NPC1L1-203ENST00000423141 WDR66Q8TBY9 1149 aa17.94■□□□□ 0.46
NPC1L1-203ENST00000423141 SLC20A1Q8WUM9 679 aa17.94■□□□□ 0.46
NPC1L1-203ENST00000423141 ART4Q93070 314 aa17.94■□□□□ 0.46
NPC1L1-203ENST00000423141 SAAL1Q96ER3 474 aa17.94■□□□□ 0.46
NPC1L1-203ENST00000423141 BORCS6Q96GS4 357 aa17.94■□□□□ 0.46
NPC1L1-203ENST00000423141 STK33Q9BYT3 514 aa17.94■□□□□ 0.46
NPC1L1-203ENST00000423141 DNAJC17Q9NVM6 304 aaKnown RBP17.94■□□□□ 0.46
NPC1L1-203ENST00000423141 PRKAG3Q9UGI9 489 aa17.94■□□□□ 0.46
NPC1L1-203ENST00000423141 CORO1CQ9ULV4 474 aaPredicted RBP17.94■□□□□ 0.46
NPC1L1-203ENST00000423141 TGFB1I1O43294 461 aa17.94■□□□□ 0.46
NPC1L1-203ENST00000423141 LINGO3P0C6S8 592 aa17.94■□□□□ 0.46
NPC1L1-203ENST00000423141 CTTNQ14247 550 aaKnown RBP17.94■□□□□ 0.46
NPC1L1-203ENST00000423141 KSR1Q8IVT5 923 aa17.94■□□□□ 0.46
NPC1L1-203ENST00000423141 GBP7Q8N8V2 638 aaPredicted RBP17.94■□□□□ 0.46
NPC1L1-203ENST00000423141 PARD3BQ8TEW8 1205 aa17.94■□□□□ 0.46
NPC1L1-203ENST00000423141 AAASQ9NRG9 546 aa17.94■□□□□ 0.46
NPC1L1-203ENST00000423141 MTMR4Q9NYA4 1195 aa17.94■□□□□ 0.46
NPC1L1-203ENST00000423141 SYNGAP1Q96PV0 1343 aa17.94■□□□□ 0.46
NPC1L1-203ENST00000423141 USP17L10C9JJH3 530 aa17.93■□□□□ 0.46
NPC1L1-203ENST00000423141 PODXLO00592 558 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms